Paracoccus marcusii: CP157_04001
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Entry
CP157_04001 CDS
T07681
Symbol
ihfB_4
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pmau
Paracoccus marcusii
Brite
KEGG Orthology (KO) [BR:
pmau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmau03032
]
CP157_04001 (ihfB_4)
03036 Chromosome and associated proteins [BR:
pmau03036
]
CP157_04001 (ihfB_4)
03400 DNA repair and recombination proteins [BR:
pmau03400
]
CP157_04001 (ihfB_4)
DNA replication proteins [BR:
pmau03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CP157_04001 (ihfB_4)
Chromosome and associated proteins [BR:
pmau03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
CP157_04001 (ihfB_4)
DNA repair and recombination proteins [BR:
pmau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CP157_04001 (ihfB_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
TetR_C_30
Motif
Other DBs
NCBI-ProteinID:
QXI66209
LinkDB
All DBs
Position
pCP157_13:complement(2972..3295)
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AA seq
107 aa
AA seq
DB search
MPLSDPGRGPMIRSELLAKLRQAHPHLSSLAVETALDTILDEIAETLSQDHRVELRGFGS
FFSKVRVARTGRNPRTGEAVDVPPKRHMHFRASRQLLERLNRPTTRG
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgtcagaccccggaagaggcccgatgatccgttcagagctgctcgcaaagctt
cgccaggcccatccgcatctgtcctcccttgccgtggagacggcgctcgacacgatcctg
gacgagatcgccgagaccctgagccaggatcatcgggtggagctgcgggggttcggcagt
ttcttcagcaaggtccgggtcgcccggacgggtcgcaatccgaggaccggagaggctgtg
gacgtgccgcccaagcggcacatgcatttccgggcctccaggcagctcttggagcggctc
aaccgtcccacaacccgtggctga
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