Peromyscus maniculatus bairdii (prairie deer mouse): 102903689
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Entry
102903689 CDS
T11302
Symbol
Slit2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04360
Axon guidance
pmav04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102903689 (Slit2)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
102903689 (Slit2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pmav00536
]
102903689 (Slit2)
Glycosaminoglycan binding proteins [BR:
pmav00536
]
Heparan sulfate / Heparin
Axon guidance molecules
102903689 (Slit2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRR_9
LRRCT
LRR_1
hEGF
EGF_TEN
LRR_14
EGF_DL_JAG
JAG1-like_EGF2
EGF_Teneurin
EGF_TGFA-like
Motif
Other DBs
NCBI-GeneID:
102903689
NCBI-ProteinID:
XP_006976165
Ensembl:
ENSPEMG00000001202
LinkDB
All DBs
Position
10:44513473..44852366
Genome browser
AA seq
1529 aa
AA seq
DB search
MSSIGWQTLSLSLGLVLSILNKVAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERL
DLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLFPE
LLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVL
TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS
HLRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTNLPE
TITEIRLEQNSIRVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI
TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALR
AIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSA
KEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHIPQYTAELRL
NNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNELLLTSNRLENVQYK
MFKGLESLKTLMLRSNRISCVGNDSFIGLGSVRLLSLYDNQITTIAPGAFDTLHSLSTLN
LLANPFNCNCHLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDNS
CSPLSRCPSECTCLDTVVRCSNKGLKFLPKGIPRDVTELYLDGNQFTLVPKELSNYKHLT
LIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDVSVV
PEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLLLTT
PSKKFTCQGPVDVTIQAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDVPIHA
CISNPCKHGGTCHLKEGENDGFWCSCADGFEGENCEVNIDDCEDNDCENNSTCVDGINNY
TCLCPPEYTGELCEEKLDFCAQDLNPCQHESKCILTPKGFKCDCTPGYIGEHCDIDFDDC
QDNKCKNGAHCTDAVNGYTCICPEGYSGLFCEFSPPMVLPRTSPCDNFDCQNGAQCIIRT
NEPICQCLPGYLGEKCEKLVSVNFVNKQSYLQIPSAKVRPQTNISLQIATDEDSGILLYK
GDKDHIAVELYRGRVRASYDTGSHPASAIYSVETINDGNFHIVELLTLDSSLSLSVDGGS
PKIITNLSKQSTLNFDSPLYVGGMPGKNNVASLRQAPGQNGTSFHGCIRNLYINSELQDF
RKVPMQTGILPGCEPCHKKVCAHGTCQPSSQSGFTCECEEGWMGPLCDQRTNDPCLGNKC
VHGTCLPINAFSYSCKCLEGHGGVLCDEEEDLFNPCQMIKCKHGKCRLSGLGQPYCECSS
GYTGDSCDRELSCRGERIRDYYQKQQGYAACQTTKKVSRLECRGGCAGGQCCGPLRSKRR
KYSFECTDGSSFVDEVEKVVKCGCTRCAS
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcattggctggcaaacactgtccctgtcgctggggttagtgttgtcgattttg
aacaaggtagcgccgcaggcgtgcccggctcagtgctcctgttcaggcagcacggtggac
tgtcatgggctggcactgcgcagcgtgcccaggaatatcccccgcaacaccgagagactg
gatctgaacggaaataacatcacaaggatcacgaagacagattttgctggtctcaggcac
ctcagagttcttcagctcatggagaacaagatcagcaccatcgagaggggagcattccag
gaccttaaggagctggagagattgcgtttaaacagaaataaccttcagttgtttcctgag
ctgctctttctcgggactgcgaagctctaccggcttgatctcagtgaaaatcaaattcaa
gcaattccaaggaaagctttccgtggggcagttgacattaaaaatttgcaactggattac
aaccagatcagctgcattgaagatggagcatttagagctctaagagatctagaagtactc
acactcaacaataacaatattactagactttcagtggcaagtttcaaccatatgcctaaa
cttaggacatttcgactccattcgaacaacttgtactgcgactgccacctggcctggctc
tcggactggcttcgccaaaggcctcgggtgggcttgtacactcagtgtatgggcccatcc
catctgaggggacataatgtagcagaggttcaaaaacgagaatttgtctgcagtggtcac
cagtcattcatggctccctcttgcagtgttctgcactgccctgctgcctgtacctgtagc
aacaatattgtagactgccgagggaaaggcctcaccgagatccccacaaatcttcctgag
accatcacggaaatacgtttggaacagaactccatcagggtcatccctcctggagctttc
tcaccatataaaaagctcagaagaattgacctcagcaataatcagatctctgagcttgcc
ccagatgccttccaaggactgcgctctctgaattcacttgtcttgtatggaaataagatc
acagaactcccaaaaagtttatttgaaggactattttccttacaactactattattgaat
gccaacaagataaattgccttcgggtagatgcttttcaggaccttcacaacttgaaccta
ctctccttgtatgacaacaagcttcagactgttgccaagggcaccttctcagctctcaga
gccatccaaactatgcatttggcccagaaccctttcatttgtgactgccatctcaagtgg
ctagcggattatctacacaccaacccaattgagaccagcggtgcccgttgcaccagcccc
cgccgcctggctaacaaaagaattggacagatcaaaagcaagaaattccgttgttcagct
aaagaacagtatttcattccaggcacagaagattatcgatcaaaattaagtggagactgc
tttgcagacttggcttgtcctgaaaagtgtcgctgtgaagggaccactgtagattgctcc
aatcaaaaactcaacaaaatcccagaccatattccccaatacacagcagagctgcgtctc
aataataatgaattcacagtgttagaagccacaggaatatttaagaaacttcctcagtta
cgtaaaatcaactttagcaacaataagatcaccgatatcgaggaaggagcatttgaaggc
gcatctggtgtgaatgaacttcttctcaccagtaatcgtttggaaaatgttcagtataag
atgttcaaaggattggaaagcctcaaaacattgatgctgagaagtaatcgaataagctgt
gttggaaacgacagtttcataggacttggctctgtgcgcctgctttccttatatgacaat
caaattactacaattgcaccaggggcatttgatactctccattccttatctacactaaac
ctcttggccaatcctttcaactgtaactgtcacctggcatggctgggagaatggctcaga
aagaaaagaattgtaacaggaaatcctcgatgccaaaagccctacttcctcaaggaaatc
cccatccaggatgtagccattcaggacttcacctgtgatgatgggaatgatgacaacagt
tgctccccactctctcgttgtccttcggagtgtacttgcctggatacagtcgtccgatgt
agcaacaagggcctgaagttcttgccgaaaggtattccaagagatgtcacagagctgtat
ctggatgggaaccagtttacactggtccccaaggaactctccaactacaaacatttaaca
cttatagacttaagtaacaaccgaataagcaccctttccaatcaaagcttcagcaacatg
acccagcttctcaccttaattctcagttacaaccgtctgagatgtatcccgccacggacc
tttgatggattgaagtctcttcggttactgtctctacatggaaatgacgtttctgttgtg
ccagaaggtgccttcaatgacctttcagccttatcgcacttagcgattggagccaaccct
ctttactgtgattgtaacatgcagtggttatccgactgggtgaagtcggaatataaggaa
cctggaattgctcgctgtgctgggcctggagaaatggcagataaattgttactcacgact
ccctccaaaaaattcacatgtcaaggtcccgtggatgttactattcaagccaaatgtaac
ccctgtttatcaaatccatgtaaaaatgatggcacctgtaataatgacccagttgatttt
tatcgatgcacctgtccatatggtttcaaggggcaggactgtgatgttcccatccatgcc
tgtatcagtaacccatgtaaacatggaggaacttgccatttaaaagaaggagagaatgat
ggattctggtgcagttgtgctgatgggtttgaaggagaaaactgtgaagttaatattgat
gattgtgaagataatgactgtgaaaataattctacatgtgttgatggaattaacaactac
acatgcctttgcccaccagaatacacaggtgagctgtgtgaggaaaagctggacttctgt
gcccaggacctgaatccctgccagcatgaatccaagtgcatcctgacaccaaagggattc
aagtgtgactgcactcctggatacattggtgagcactgtgacattgactttgatgattgc
caggataacaagtgcaaaaatggtgctcactgcactgacgcagtgaatggttatacatgc
atctgccctgaaggctacagtggcttgttctgtgagttttctccacccatggtcctccct
cgaaccagcccctgtgataattttgattgtcagaacggagcccagtgcatcatcaggacc
aatgaaccgatatgccagtgtttgcctggctacctgggagagaagtgtgaaaagttggtc
agtgtgaattttgtaaacaaacagtcctacctgcagattccttcagccaaggttcggcct
cagaccaacatttcacttcagattgccacagatgaagacagcggcatcctcctgtataag
ggtgacaaagaccacattgctgtggaactctatcgagggcgagttcgagccagctatgac
accggctctcacccggcttcggccatttacagtgtggagacaatcaatgatggaaatttc
cacattgtggagctactgaccctggattcgagcctttccctctctgtggatggaggaagc
cctaaaatcatcaccaacttgtcaaaacaatctactctgaattttgactccccactttat
gtaggaggcatgcctgggaagaataacgtggcatcattgcgccaggcccctgggcagaat
ggtaccagcttccatggctgtatccggaacctttacatcaacagtgagctgcaagacttc
cggaaagtgcccatgcaaaccgggattctgcctggttgtgaaccatgccacaagaaagta
tgtgctcatggcacatgccagcccagcagccagtcaggcttcacctgtgaatgtgaggaa
gggtggatggggcccctctgtgaccagcgaaccaatgacccctgccttggaaacaaatgt
gtacacggcacctgcttgcccatcaatgccttctcctacagctgtaagtgcctggaaggt
cacggaggtgtcctttgtgatgaagaggaagacctgtttaacccttgccagatgataaag
tgcaagcatggcaagtgcaggctctctggactggggcagccctactgtgaatgcagcagt
ggatacactggggacagctgtgacagagaactttcttgccgaggggagcggatccgagat
tattaccaaaagcagcagggttatgctgcctgtcaaacaacaaagaaagtgtctcgcttg
gaatgtagaggaggatgtgccggtgggcaatgctgtggacctctgaggagcaagaggcgg
aaatactcctttgagtgcacagacggatcctcatttgtggacgaggtggagaaggtggtg
aagtgtggctgcacgagatgtgcctcctaa
DBGET
integrated database retrieval system
