Peromyscus maniculatus bairdii (prairie deer mouse): 102903779
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Entry
102903779 CDS
T11302
Symbol
Col9a2
Name
(RefSeq) collagen alpha-2(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04151
PI3K-Akt signaling pathway
pmav04510
Focal adhesion
pmav04512
ECM-receptor interaction
pmav04820
Cytoskeleton in muscle cells
pmav04974
Protein digestion and absorption
pmav05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102903779 (Col9a2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102903779 (Col9a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102903779 (Col9a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102903779 (Col9a2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102903779 (Col9a2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
102903779 (Col9a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pmav00535
]
102903779 (Col9a2)
Proteoglycans [BR:
pmav00535
]
Extracellular matrix (ECM) proteoglycans
Others
102903779 (Col9a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
102903779
NCBI-ProteinID:
XP_076421088
Ensembl:
ENSPEMG00000018729
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Position
2:140393451..140410303
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AA seq
604 aa
AA seq
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MGAKGEPGPMGTPGVKGQPGLPGPPGLPGPGFAGPPGPPGPVGLPGEIGTPGPKGDPGPE
GPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPAGVKGPQGLQGVKGHPGKRGILGDPG
RQGKPGPKGDVGASGEQGIPGPPGPQGTRGYPGMAGPKGEMGPRGYKGMVGSVGAAGPPG
EEGPRGPPGRAGEKGDVGSQGVRGPQGITGPKGTTGPPGIDGKDGTPGIPGMKGSAGQVG
RPGSPGHQGLAGVPGQPGTKGGPGDKGEPGQQGFPGISGPPGKEGEPGPRGEIGPQGIMG
QKGDQGERGPVGQPGPQGRPGPKGEQGPPGIPGPQGLPGIKGDKGSPGKTGPRGGVGDPG
VAGLPGEKGEKGQSGEPGPKGQQGVRGEPGYPGPSGDAGAPGVQGYPGLPGPRGLMGDRG
VPGQPGRQGVVGRAANEQHIVDVVLKMIQEQLAEVAVSAKREALGATGMVGPPGPPGPPG
YPGKQGPHGHPGPRGIPGIVGAVGQIGNTGPKGKRGEKGDQGEMGRGHPGMPGPPGIPGL
PGRPGQAINGKDGDRGSPGAPGVAGRPGLPGPVGLPGFCEPAACLGASAYASARLTEPGS
IKGP
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccaagggagagcctggacccatggggacccctggagtcaagggtcagcctggc
ctcccagggccccctggcctgccgggccccggttttgctggccctcccggaccacctgga
cccgttggcctccctggtgagattggaaccccaggccccaagggggacccaggaccagag
ggaccatcagggcccccaggaccccctgggaaaccaggccgaccaggaaccatccagggc
ctggaagggagtgcagatttcctgtgtccaaccaactgtccagctggtgtgaaaggcccc
caggggctgcaaggagtgaaggggcatccaggcaaacgggggattctgggtgatcctggt
cgccaggggaagccgggccccaagggagatgtgggtgcctctggagaacaaggcattccc
ggaccaccgggtccccagggcaccaggggctacccaggcatggcaggacctaagggagag
atgggtcctcgtggatacaaaggcatggtgggctccgtcggggctgctgggccaccggga
gaagaaggccccagggggccaccaggccgagctggtgagaagggggatgtgggcagccaa
ggtgtccgaggaccccaggggataacaggcccaaagggaaccacgggtcccccaggcatt
gatggcaaggatgggaccccgggcatacctggcatgaagggcagtgcaggacaggtgggg
cggccaggaagcccaggccaccagggcctagcgggtgtgccgggtcagcctgggacaaaa
ggaggccctggagacaagggtgaaccaggccagcagggcttccctggaatctctggtcct
ccagggaaagaaggggagccagggcctcgaggagaaattggtccccagggcatcatggga
cagaagggtgaccagggtgagaggggaccagtagggcagccaggccctcaaggacgaccg
ggccccaagggagagcagggtcccccgggaattccaggaccccaaggcttgccaggcatc
aaaggagataagggttccccagggaagaccggtccccgaggcggagtgggtgacccaggg
gtggccggcctcccgggtgagaaaggggagaagggccagtctggagagccgggacccaag
ggacagcaaggagtccgtggagagccaggataccctggccccagtggggatgcgggcgct
ccaggagtgcagggctacccggggcttcctggaccccgaggactgatgggagatcgaggc
gtgccgggacaacctgggagacaaggtgtagtgggccgagctgccaatgagcagcacatc
gtggacgtggtgctgaagatgattcaagagcaactggcagaggtagctgtgagtgccaag
cgggaagccctgggggcaaccggaatggtgggtcccccaggacctcccgggccccctgga
tatccaggcaaacagggaccccatgggcatcctggaccccgaggcattcctggcatcgtg
ggagcagtgggtcagattggcaacactggacccaagggaaagcgtggagagaaaggtgac
caaggagaaatgggacgtgggcaccccgggatgcccggacccccagggatcccaggtctt
cccggccggcccggccaggcaatcaatggcaaggatggagaccgtggatccccaggggct
ccaggggtggctggccgacctggcttgccaggcccggtggggctgcccgggttctgtgag
cctgccgcctgcctgggggcttcagcctatgcctctgctcgcctcacggagcctgggtcc
atcaaggggccatga
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