Peromyscus maniculatus bairdii (prairie deer mouse): 102903862
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Entry
102903862 CDS
T11302
Symbol
Neo1
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04350
TGF-beta signaling pathway
pmav04360
Axon guidance
pmav04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
102903862 (Neo1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
102903862 (Neo1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
102903862 (Neo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmav04515
]
102903862 (Neo1)
Cell adhesion molecules [BR:
pmav04515
]
Immunoglobulin superfamily
DCC/UNC5 family
102903862 (Neo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Interfer-bind
Ig_5
C2-set_2
fn3_2
fn3_SORL1
Tissue_fac
Fn3_R-PTP-O
TMEM154
EphA2_TM
DUF4998
TM_ErbB1
Herpes_UL74
FAM176
Motif
Other DBs
NCBI-GeneID:
102903862
NCBI-ProteinID:
XP_076432502
Ensembl:
ENSPEMG00000019952
LinkDB
All DBs
Position
7:complement(56040744..56209935)
Genome browser
AA seq
1491 aa
AA seq
DB search
MAAEREARRLLSTSSSRRCCPTPLLWLPLLLLLLGRPASGAAAVRSGSPPQSAGASVRTF
TPFYFLVEPVDTLSVRGSSVTLNCSAYSEPSPKIEWKKDGTFLNLVSDDRRQLLPDGSLF
ISNVVHSKHNKPDEGFYQCVATVDNLGTIVSRTAKLTVAGLPRFTSQPEPSSVYAGNSAI
LNCEVNADLIPFVRWEQNRQPLLLDDRVVKLPSGTLVISNVTEGDGGLYRCIVESGGPPK
YSDEAELKVLQGPEEMLNLVFLMRPSPVIRVTGQSAVLPCVVSGLPSPGLRWMKNEEVLD
TESSERLVLLAGGSLEISDLTEDDSGTYFCIADNGNKTIEAQAELTVQAPPEFLKEPTNI
YAHESMDIVFECEVTGKPTPTVKWVKNGDVVIPSDYFKIVKEHNLQVLGLVKSDEGFYQC
IAENDVGNAQAGAQLIILEHDVAIPTLPPTSLTSATTDHLAPATTGPLPSAPRDVVASLV
STRFIKLTWRTPASDPHGDNLTYSVFYTKEGVARERVENTSQPGEMQVTIQNLMPATVYI
FKVMAQNKHGSGESSAPLRVETQPEVQLPGPAPNIRAYATSPTSITITWETPLSGNGEIQ
NYKLYYMEKGTDKEQDIDVSSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTQDVAVRTLS
DVPSAAPQNLSLEVRNSKSIVIHWQPPSSATQNGQITGYKIRYRKASRKSDVTETLVTGT
QLSQLIEGLDRGTEYNFRVAALTVNGTGPATDWLSAETFESDLDETRVPEVPSSLHVRPL
VTSIVVSWTPPENQNIVVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLK
AFNNVGEGIPLYESAVTRPHTDTSEVDLFVINAPYTPVPDPTPMMPPVGVQASILSHDTI
RITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEFSV
MVTKGRRSSTWSMTAHGATFELVPTSPPKDVTVVSKEGKPRTIIVNWQPPSEANGKITGY
IIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFR
TPKADSSDKMPNDQALGSTGKGSRLPDLGSDYKPPMSGSNSPHGSPTSPLDSNMLLVIIV
SVGVITIVVVVIIAVFCTRRTTSHQKKKRAACKSVNGSHKYKGNCKDVKPPDLWIHHERL
ELKPIDKSPDPNPVMTDTPIPRNSQDITPVDNSMDSNIHQRRNSYRGHESEDSMSTLAGR
RGMRPKMMMPFDSQPPQPVISAHPIHSLDNPHHHFHSSSLASPARSHLYHPSSPWPIGTS
MSLSDRANSTESVRNTPSTDTMPASSSQTCCTDHQDPEGATSSSYLASSQEEDSGQSLPT
AHVRPSHPLKSFAVPAIPPPGPPIYDPALPSTPLLSQQALNHHIHSVKTASIGTLGRSRP
PMPVVVPSAPEVQETTRMLEDSESSYEPDELTKEMAHLEGLMKDLNAITTA
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagcgcgaagcccggcgactcctcagcacctcctcctcccggcgctgctgc
cccacaccgctgctgtggctgccgctgctgctgctgctgctcgggcgcccggcgtccggc
gccgcggccgtgaggagcggttccccgccgcagtccgcaggagccagcgttcgaacattc
actccattttattttctggtggagcccgtggacacactctcagttagaggctcttctgtt
acattaaactgttcagcatattctgagccttctccaaaaattgaatggaagaaagatgga
acttttttaaacttagtatcagatgatcgccgccagcttctcccagatggatctttattc
atcagcaatgtggtgcattccaaacacaataagccagatgaaggtttctatcagtgtgtg
gccactgtggataatcttggaactattgtcagcagaacagctaaactcacggtagcaggt
cttccgagatttaccagccaaccagaaccttcctcagtatatgctggaaacagtgcaatt
ctgaattgtgaagttaatgcagatttaatcccatttgtaaggtgggaacagaacagacag
cctcttcttctggatgacagggttgtcaaacttccaagtggaacactggttatcagcaat
gtgactgaaggagatggaggactctaccgctgcatagttgaaagtggtgggccaccaaag
tatagtgatgaagctgaattgaaagttcttcaaggtcctgaggaaatgctaaacctggta
tttttgatgcggccatctcctgtgatcagagttactggtcagagtgcagttttgccttgt
gttgtctcaggacttccttctccaggccttagatggatgaaaaatgaggaagtgcttgac
acagaaagctctgaaaggttggtcttgctagcaggaggtagtttggagatcagtgacctc
actgaggatgattctgggacttatttttgtatagctgataatggaaataagacaattgaa
gctcaggcggagcttactgtgcaagctccacctgaattcttgaaagaacccactaacata
tacgctcacgaatccatggatattgtatttgagtgtgaagtcactgggaagccaactcca
actgtgaagtgggtcaagaatggggatgtggttatcccgagtgattactttaaaattgta
aaggaacataatctgcaagtgttgggtctggtgaaatcagatgaagggttctatcaatgc
attgctgagaatgatgttggaaatgcacaagctggagcccagctgataatccttgagcat
gatgttgccatcccaacattacctcccacttcactgaccagtgccactactgaccatcta
gcaccagccacaacgggaccactgccttcagctcctcgggatgtcgtggcctccttggtc
tccacccgcttcatcaaattgacatggcgtacacctgcatcagatcctcatggagacaat
ctcacctactctgtgttctacaccaaagaaggggttgctagggagcgtgttgagaatacc
agtcagcctggagagatgcaggtgactattcaaaacttaatgccagcaactgtgtacatc
ttcaaagttatggctcaaaataaacacggttctggagagagttcagctcctctacgagta
gaaacacagcctgaagttcagctccctggtcccgcacctaatatccgagcttatgcaacg
tcacctacttctatcaccatcacatgggaaacaccactgtccggcaatggggaaattcaa
aattacaaattgtactacatggaaaaagggactgataaagaacaggatattgatgtttca
agtcactcctacactattaatggactgaaaaaatacacagagtatagtttccgagtggtg
gcctacaataaacatggtcctggagtctccacacaagatgttgctgttcgaacattatca
gatgttcccagtgctgctcctcagaatctgtccttagaagtgagaaattcaaagagtata
gtgattcactggcagcctccttcttcagccacacaaaatgggcagattactggctacaag
attcgctatcgaaaggcctcccgaaaaagtgatgtcactgagaccttagtaactgggaca
cagctgtctcagctgattgaaggtcttgatcgggggacagaatataacttccgagtagct
gctctcacagtcaatgggacaggcccagcaactgattggctatctgctgaaacttttgag
agtgacctagatgaaactcgtgttcctgaagtgcccagctctcttcatgtccgtccactt
gtcacgagcatcgtagtaagctggactcctccagagaaccagaacattgtggttcgaggg
tatgccattggttatggcattggcagccctcacgcacagaccatcaaagtggactataaa
cagcgttactataccattgaaaacctggatccaagctctcattatgtgattaccctgaaa
gcattcaacaacgttggcgaaggtatccccctttatgagagtgctgtgaccagacctcat
acagacacttctgaagttgatttatttgttattaatgctccatacactccagtgccagat
cccactcccatgatgccaccagtgggagttcaggcttccattctgagtcatgacaccata
aggattacatgggcggacaactccctgcccaaacaccagaagattaccgattcccgctac
tacacggttcggtggaagaccaatatcccagcaaacaccaagtacaagaatgcaaatgcc
acaactttaagctacttggttactggtttaaaaccaaatacgctctatgaattctctgtg
atggtgaccaaaggtagaaggtcaagcacgtggagtatgacagctcatggcgctaccttt
gaattagttcctacttctccacctaaggatgtgacagttgtgagtaaagaaggaaaacct
aggaccataatagtgaactggcagcctccctctgaagctaacggcaagattacaggttac
atcatttattacagcacagatgtgaatgcagagatacatgactgggtcattgaacctgtt
gtgggtaacagactgactcaccagattcaggagttaacacttgatacaccatactacttc
aaaatccaggcccggaattcaaaaggcatggggcccatgtctgaagctgtccagttcaga
acacctaaagcggactcctctgataaaatgcctaatgaccaagccttaggatcgacagga
aaaggaagccgactgccagacctaggatctgactacaaacctccaatgagtggcagcaac
agccctcatgggagccccacctctcccctagacagcaatatgctgctggtcatcattgtc
tctgttggtgtcatcaccattgtggtggttgtgatcatcgctgtcttctgtacccggcgc
accacctctcaccagaagaagaaacgagctgcctgcaaatcagtgaatggctcccataag
tataagggcaactgcaaagatgtgaaacccccagatctatggatccatcatgagagactg
gagttgaagcctattgacaagtctccagatccaaaccctgtcatgactgatactccaatc
cctcgaaattctcaagatatcacacctgtcgacaattccatggatagcaatatccatcaa
aggcggaattcatacagagggcatgagtcagaagacagcatgtctacactggctggaagg
aggggaatgagaccaaaaatgatgatgccttttgactctcagccacctcagcctgtgatt
agtgcccatcccatccattccctcgataaccctcaccatcatttccactccagcagcctc
gcttctccagcccgcagtcatctctaccacccaagcagcccatggcccattggcacatcc
atgtccctttcagacagggccaattccacagagtctgttcgaaacacccccagcacggac
accatgccggcctcctcatctcagacatgctgcactgatcatcaggatcctgaaggtgct
accagctcctcttacttggccagctcccaagaggaagactcaggccaaagccttcccaca
gcccacgttcgcccttctcacccactgaagagctttgctgtgccagcaatcccacccccg
ggacctcctatctatgaccctgcactgccaagcacaccattactgtcccagcaagctctg
aaccatcacattcactcagtaaaaacagcctccatcgggactttaggaaggagccggcct
cctatgccagtggttgttcccagtgcccctgaagtacaggagaccaccaggatgctagaa
gactctgagagtagctatgaaccagatgagctgaccaaagagatggcccacctggaagga
ctaatgaaggacctaaatgccatcacaacagcttga
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integrated database retrieval system
