Peromyscus maniculatus bairdii (prairie deer mouse): 102904152
Help
Entry
102904152 CDS
T11302
Symbol
Pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03030
DNA replication
pmav03410
Base excision repair
pmav03420
Nucleotide excision repair
pmav03430
Mismatch repair
pmav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102904152 (Pold1)
03410 Base excision repair
102904152 (Pold1)
03420 Nucleotide excision repair
102904152 (Pold1)
03430 Mismatch repair
102904152 (Pold1)
03440 Homologous recombination
102904152 (Pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmav03032
]
102904152 (Pold1)
03400 DNA repair and recombination proteins [BR:
pmav03400
]
102904152 (Pold1)
Enzymes [BR:
pmav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
102904152 (Pold1)
DNA replication proteins [BR:
pmav03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
102904152 (Pold1)
DNA repair and recombination proteins [BR:
pmav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
102904152 (Pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
102904152 (Pold1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
102904152
NCBI-ProteinID:
XP_006986263
Ensembl:
ENSPEMG00000015996
LinkDB
All DBs
Position
1:37523976..37543281
Genome browser
AA seq
1103 aa
AA seq
DB search
MDIKRRQGPGPGVPPKRIRGGLWDEDEPSQFEESLAQLEETEDENRLQEAEEELQLPPEG
TAGGQFSTADIDPRWLRPNLRALDPSTEPLIFQQLEIDHYVGSAVPLPGGPPVSRNSVPI
LRAFGVTDEGFSICCHIHGFAPYFYTPAPPGFGAEHLSDLQRELNAAISRDQRGGKELSG
PAVLAMELCSRESMFGYHGHGPSPFLRIILALPRLVAPARRLLEQGIRVPGLGTPSFAPY
EANVDFEIRFMVDADIVGCNWLELPAGKYVQRTEKKATLCQLEVDVLWSDVISHPPEGQW
QRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPCAPIL
GARVQSYEREEDLLQAWANFILAMDPDVITGYNIQNFDLPYLISRAQTLKVERFPFLGRV
IGLRSNIRDSSFQSRQVGRRESKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGE
QKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAFLPLRLLERLMVLVNNVEMARVTGVPLG
YLLSRGQQVKVVSQLLRQAMRQGLLMPVVKTEGGEDYTGATVIEPLKGYYDVPIATLDFS
SLYPSIMMAHNLCYTTLLRPGAAQKLGLKPDEFIRTPTGDEFVKSSVRKGLLPQILENLL
SARKRAKAELAQETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFG
RQMIEKTKQLVESKYTLENGYDANAKVVYGDTDSVMCRFGVSSVAEAMSLGREAANWVSS
HFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSQPDTHDRMDCKGLEAVRRDNCPLVANLV
TSSLRRILVDRDPDGAVAHAKDVISDLLCNRIDISQLVITKELTRAAADYAGKQAHVELA
ERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQLAK
PLLRIFEPILGEGRAESVLLRGDHTRCKTVLTSKVGGLMAFTKRRNCCIGCRSVINHQGA
VCEFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMRKK
VRKDLEDQERLLQRFGPPGPEAW
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggatattaagcggcgacaaggaccaggccctggggtgcctccaaagcggattcgtggg
ggcctgtgggatgaggatgaaccatcacagtttgaggagagcttggcacagctggaggag
acagaggatgagaatcggctgcaggaggcagaggaggagctgcagctgcctccagagggc
accgcgggcgggcagttttccactgcggacattgacccgcgctggctgcggcctaaccta
cgtgccctggaccccagcacggagcccctcatcttccagcagctggagatcgaccactat
gtgggctcagcggtgccactgccaggggggcccccagtatcccgtaattcagtgcccata
ctgcgggcctttggggtcaccgatgagggcttctccatctgctgccatatccatggcttt
gcaccctacttctacacccctgcacctcccggttttggggctgagcacctgagtgacctg
cagcgagagctgaacgcggccatcagccgggaccagcgtggtgggaaggagctctcgggg
ccagcagtgctggccatggagctgtgctcccgtgagagcatgtttgggtaccatggtcac
ggcccttctccgtttctccgcatcatcctggcactaccccgccttgtggcaccagcccgc
cgcctcctggaacagggtatccgtgtgccaggcctggggaccccaagcttcgcgccctat
gaggccaacgtggacttcgagatccggttcatggtggatgctgacatcgtgggctgcaac
tggttggagctcccagctgggaagtatgttcagaggacagagaagaaggccacactgtgt
cagctggaggtggatgtgctgtggtcagatgtgatcagtcacccaccagaagggcagtgg
cagcgcattgccccactgcgtgtgctcagctttgacatcgagtgtgctggccgcaaaggc
atcttcccggagccggagcgtgaccctgtgatccagatctgttccctgggactgcgctgg
ggcgagccagagccgttcttgcgcctggcactcacgctgcggccctgcgcccccatcctg
ggtgccagagtgcagagctacgagcgggaagaagacctgctccaggcctgggccaacttc
atccttgccatggaccctgacgtgatcaccggctacaacattcagaactttgacctccca
tacctcatctctcgggcgcaaaccctgaaggtggagcgcttccctttcctgggccgtgtg
attggtctccgctccaacatccgagactcctccttccagtcgaggcaggtgggccggcgg
gagagtaaggtggtcagcatggtgggtcgagttcagatggacatgctgcaggtgctgctg
cgggaatacaagctccgctcctacacgctcaatgccgtgagcttccacttcctgggcgag
cagaaggaggatgtgcagcacagcatcatcaccgacctgcagaacgggaatgagcagacg
cgccgccgcctggccgtgtactgcctgaaggatgccttcctgccgcttcggctgctcgag
cgccttatggtgctggtgaacaacgtggagatggcgcgtgtcacaggtgtgccccttggg
tacctgctcagccgaggccagcaggtcaaggtcgtgtctcagctgctgcgccaggccatg
cgccaggggctgctgatgcctgtggtgaagactgagggtggcgaggactacacgggagcc
actgtcatcgagcccctcaaagggtactatgacgtccccattgccaccctggacttctcc
tctctatacccatccatcatgatggcccataatctgtgctacaccacgctgctacggccc
ggggctgctcagaagctgggccttaaaccagatgagttcatcaggacacccactggggat
gagtttgtgaagtcctccgtgcggaagggcctcctgccccagatcctggagaatctgctg
agtgcccggaagagggccaaggctgagctggctcaggagaccgaccccttgcggcgacag
gtcttggatggacggcagctggcactgaaagtgagtgccaactcggtgtatggcttcact
ggtgcccaggtgggcaagctaccatgtttggagatctcgcagagtgtcactgggttcggg
cgtcagatgattgagaaaaccaagcaactagtggagtccaagtacaccctggaaaatggc
tacgatgccaacgccaaggtggtctacggggacactgactctgtgatgtgccgatttggt
gtctcctcggtggctgaggcaatgtctctgggtcgggaggccgcaaactgggtatccagt
cactttccatcgcccatccggcttgagtttgagaaggtttactttccatacctgctcatc
agcaagaagcgctatgctggcctgctcttctcctcccagcctgatacccatgacagaatg
gactgcaagggcctggaggccgtgcgcagggataattgtcccctggtggccaaccttgtt
acttcctctctgcgccgaatcctcgtggaccgggatcctgacggtgcggtggcccatgca
aaagatgtcatctcggacctgctctgcaaccgaatagacatctcccagctggtcatcacc
aaggagctgacccgagcagcagcagactacgctggcaaacaggctcacgtggaactggct
gagaggatgaggaagcgcgaccccggcagcgcgcccagcttgggtgaccgcgtcccctat
gtgatcatcggtgctgccaaaggcgtggccgcctacatgaagtcggaggaccccctgttt
gtgctggagcacagcctgcccatcgacactcagtactacctggagcagcagctggccaag
ccgctgctgcgcatctttgagcccattctgggtgagggccgtgcggagtccgtgctgcta
cgcggtgaccacacacgctgcaaaaccgtgctcaccagcaaggttggtggcctcatggcc
ttcaccaagcgccgcaactgttgcattggctgccgctccgtgatcaaccatcagggagct
gtgtgtgagttctgtcagccacgggagtcagagctctatcagaaggaggtgtcacacctg
aatgccctggaggaacgcttctcgcgcctctggacacagtgccagcgttgccagggcagc
ttgcacgaagacgtcatctgcaccagccgcgactgtcccatcttctacatgcgcaagaaa
gtgcgcaaggacctggaggaccaggagaggctgctgcagcgtttcggacctccgggccct
gaggcctggtga
DBGET
integrated database retrieval system
