Peromyscus maniculatus bairdii (prairie deer mouse): 102904191
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Entry
102904191 CDS
T11302
Symbol
Nup85
Name
(RefSeq) nuclear pore complex protein Nup85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03013
Nucleocytoplasmic transport
pmav05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102904191 (Nup85)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102904191 (Nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmav03019
]
102904191 (Nup85)
03036 Chromosome and associated proteins [BR:
pmav03036
]
102904191 (Nup85)
Messenger RNA biogenesis [BR:
pmav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102904191 (Nup85)
Chromosome and associated proteins [BR:
pmav03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
102904191 (Nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
TPR_4
Motif
Other DBs
NCBI-GeneID:
102904191
NCBI-ProteinID:
XP_006993686
Ensembl:
ENSPEMG00000002271
UniProt:
A0A6I9MDY6
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All DBs
Position
8:103133991..103166654
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AA seq
657 aa
AA seq
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MEELDCEPAVTWIPGVNSKKKQMCFDWGPGEMLLCETSFNKKDKPEKVPSCPFIYIIRKD
VDVYSQILRKLFNESHGIFVGLQRIEEELTGKSRKAQLVRVSKNYRSVIRACMEEMHQVA
IAAKDPASGRQFSSQVSILSAMELIWNLCEILFIEVAPAGPLLLHLLDWVRLHVCEVDSL
SADVLGSENPSKHESFWNLVTVLVLQGRLDEARQMLSKEADANPPSASMCRILGDLMRTM
PILSPGNTQTLTELELKWQHWREECERHLQDSTFAASPRLESLCKIMLGDEATLLEHKEL
LSNWYHFLVTRLLYSNPTVKPIDLHFYAQSSLDMFLGGESSPEPLDNILMAAFEFDIHQV
IKECSIALSNWWFVAHLTDLLDHCRLLQSHNLYFGSNMREFLLLEYASGLFAHHSLWQLG
VDYFDHCPELGRVSLELHIERIPLNTEQKALKVLRVCEQRQMTEQVRSICKILAMKAVRN
NRLGSALSWSIRAKDAAFATLVSDRFLRDYCERGCFSDLDLIDNLGPAMMLSDRLTFLGK
YREFHRLYGEKRFGDAASLLLSLMTSQIAPRSFWMTLLTDALPLLEQKQVIFSAEQTYEL
MRCLEDLASGRPGCGEPDAQRLQDEDDIEATKVEMLRLALARNLARAILREGSLEGS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctcgattgcgagcccgcagtaacttggattccaggcgtgaattccaagaag
aagcaaatgtgttttgactggggtcctggggagatgctcctgtgtgaaacttccttcaac
aaaaaagacaaaccagagaaggtgccgagctgcccctttatctatatcatacggaaagat
gtagatgtttactctcaaattttgagaaaactcttcaatgaatcccatggaatctttgtt
ggtctgcaaagaattgaggaggaattgactggaaaatccaggaaagctcaattggttcga
gtgagtaaaaattaccgatcggtcatacgggcctgtatggaagaaatgcaccaggttgca
attgctgctaaagatccagccagtggccggcagttcagcagccaggtctccattttgtca
gccatggagctcatctggaacctgtgtgagattctttttattgaagtagccccagctggc
cccctcctccttcatcttcttgactgggtccgactgcacgtgtgtgaggtggacagtttg
tcagcagatgttctgggcagtgagaacccaagtaaacatgagagcttctggaacttggtg
actgtcttggtgcttcagggccggttggatgaggcacgacaaatgctgtccaaagaagct
gatgccaaccccccttctgcaagcatgtgccgcatccttggggatctgatgaggacaatg
cccattctgagtcctggcaacactcagactctgacggagctggagctgaagtggcagcat
tggcgtgaggagtgtgagcggcacttgcaagacagcacattcgcagccagcccccgtctg
gagtcgctctgcaagatcatgctgggagacgaggccaccttgttggagcacaaggagctt
ctgagcaactggtaccatttcctagtgactaggctgctgtattctaaccccacagtgaaa
cctattgacctgcacttctatgcccagtccagcctggacatgtttctgggaggtgagagc
agtccagagccactggacaacatcttgatggcggcctttgagtttgacatccaccaggtg
atcaaggagtgcagcatcgccttaagcaactggtggttcgtagctcacctcaccgacctg
ttggatcactgcagactcctccagtcacacaacctctattttggttctaacatgagagag
ttccttctgctggaatatgcctcaggactctttgctcatcacagcctgtggcagctgggg
gtggattactttgaccactgcccggagctgggccgcgtttccctggagctgcacatagag
cggattcccctcaacacagagcagaaagccctgaaggtgctgagggtctgtgagcagcgg
cagatgactgaacaagttcgaagcatctgtaagatcttggccatgaaggctgtccgcaat
aaccgcctgggctcagccctctcttggagcatccgtgccaaagacgctgcttttgccacg
ctcgtatctgacagattcctcagggattactgtgagagaggctgcttttctgacttggat
ctcattgacaacctggggccagccatgatgctcagtgatcgactgacattcctgggaaag
taccgggagttccacagactgtatggggagaagcgctttggtgacgctgcttctcttctg
ctgtccctcatgacctctcagatagcacctcgttctttctggatgactctgctgacagat
gccctacctcttttggaacagaaacaggtgattttctcagcagagcagacatatgagctg
atgcgctgcctggaagacttggcctcagggaggccagggtgtggtgagcctgatgcccag
cgactccaggacgaagacgacatagaggccaccaaggtggagatgctgagactggctctt
gcccggaacctcgctcgggcaattctaagagaaggctcactggaaggttcctga
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