KEGG   Peromyscus maniculatus bairdii (prairie deer mouse): 102904630
Entry
102904630         CDS       T11302                                 
Symbol
Wdtc1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
  KO
K11807  WD and tetratricopeptide repeats protein 1
Organism
pmav  Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:pmav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pmav04121]
    102904630 (Wdtc1)
Ubiquitin system [BR:pmav04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     102904630 (Wdtc1)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40 Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_EML_2 EIF3I Beta-prop_WDR3_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st TPR_19 Beta-prop_NOL10_N DSE1_N TPR_2 TPR_17 TPR_1 WD40_RFWD3 ANAPC4_WD40 TPR_11 PAC11 Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin Beta-prop_WDR41 ANAPC3 TPR_16 Beta-prop_HPS5 TPR_14 Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N TPR_6 TPR_BSK1_C ASA1 NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_SCAP CFAP70_TPR_C Barstar
Other DBs
NCBI-GeneID: 102904630
NCBI-ProteinID: XP_006975680
Ensembl: ENSPEMG00000011264
UniProt: A0A6J0D9B3
LinkDB
Position
2:complement(151783084..151853686)
AA seq 676 aa
MAKVNITRDLIRRQIKERGALSFERRYHVTDPFIRRLGLEAELQGHSGCVNCLEWNEKGD
LLASGSDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKFLPHAGDRILITGAADSKVHVHD
LTVKETIHMFGDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRENSKHSEVLIDLTEY
CGPMVEAKCLTVNPQDNNCLAVGASGPFVRLYDIRMIHNHRKSMKQSPSTGVHTFCDRQK
PLPDGAAQYYVAGHLPVKLPDYNSRLRVLVATYVTFSPNGTELLVNMGGEQVYLFDLTYK
QRPYTFLLPRKCHPVEVQNGKMSTTNGVSNGVSNGLHLHSNGFRLPESKGCISPQVELPP
YLERVKQQANEAFACQQWTQAIQLYSKAVQKAPHNAMLYGNRAAAYMKRKWDGDHYDALR
DCLKAISLNPCHLKAHFRLARCLFELKYVAEALECLDDFKGKFPEQAHSSACDALGRDIT
AALFSKNDGEEKKAAGGGPVRLRSTSRKDSISEDEMVLRERSYDYQFRYCGHCNTTTDIK
EANFFGSNAQYIVSGSDDGSFFVWEKETTNLVRVLQGDESIVNCLQPHPSYCFLATSGID
PVVRLWNPRPESEDLTGRVVEDMEGASQANQRRMNANPLEAMLLDMGYRITGLSSGGAGA
SDDEDSSEGQVQCRPS
NT seq 2031 nt   +upstreamnt  +downstreamnt
atggcaaaagtcaacataactagagacctcattcgtaggcaaatcaaggaacggggtgcc
ctgagctttgaacggcgatatcatgtcacagatccatttatccggcggctgggcctggaa
gcagagcttcagggtcactcaggatgtgtcaactgtctggagtggaatgaaaaaggagac
ttgctggcttctggttccgatgaccagcacaccattgtttgggacccactgcatcacaag
aagctactctccatgcacacaggacacacagcaaatatcttctctgtcaagttcctgcct
catgctggagaccgaatcttgatcacgggggcagctgactccaaggtgcatgtccatgac
ctgacggtaaaggagacgatccacatgtttggagaccacacaaaccgggtgaagcgcatt
gccacagcacccatgtggcctaacacattctggagcgccgctgaggatggccttatccgc
cagtatgaccttcgggagaacagcaaacactcagaggtgctgattgacctgacagagtac
tgtggtccaatggtggaggccaagtgcctcacagtcaatccccaggacaacaactgcctg
gcagtaggagccagtgggcccttcgtaagactctatgacattcggatgatccataaccac
agaaagagcatgaagcagagcccttccacgggagtgcacaccttctgtgaccggcagaag
cccctgcccgatggtgcggcgcagtactatgtggcaggtcacctgccggtgaagctgccc
gactataacagccgtctgagagtgctggtggccacttacgtgaccttcagccccaacggc
acagagctgctcgtcaacatgggaggggagcaggtatatttgtttgacctgacttacaag
caacggccatacaccttcctcctgcctagaaaatgccacccagtggaagtccagaatggc
aagatgtctactactaacggtgtgtccaatggcgtgtccaatggcctacaccttcacagc
aatggcttccggctgccagaaagcaaggggtgtatcagcccccaggtggagctgccccca
tacctggaacgtgtgaagcagcaagccaatgaggcctttgcctgccagcagtggacccag
gccatccagctttacagcaaggctgtgcagaaggctcctcacaacgccatgctctatgga
aaccgagctgccgcctacatgaagcgcaagtgggatggcgaccactatgatgctctccgc
gactgcctcaaggccatctccttgaacccttgccacctgaaggcacacttccgtctggcc
cgatgcctctttgaactgaagtatgtggctgaggctctggagtgcctggacgacttcaaa
gggaagttcccagaacaggcccacagcagtgcttgtgatgcgttgggtcgggacatcaca
gctgcccttttctccaaaaatgatggtgaggagaagaaggcagctggcgggggtccagtt
cgccttcgaagcaccagtcgcaaggactccatctccgaagatgaaatggtgctgcgggaa
cggagctacgactaccagttccgctactgcggccactgtaacaccacgacagacatcaag
gaggccaacttcttcggcagcaatgctcagtacatcgtcagtggctctgacgatggctcc
ttcttcgtctgggaaaaggagaccaccaacctagtccgagtgctccagggcgatgagtcc
atcgtcaactgcttgcagccgcaccccagctactgcttcctggccaccagtggcatcgac
ccggttgtgcgactgtggaacccacggccagagagtgaagacctcacaggccgagtggtg
gaggatatggagggtgcctctcaggccaaccagcggcgcatgaatgccaaccccttggag
gcgatgctgctggacatgggctaccggatcacaggcctgagcagtgggggtgctggggcc
tctgacgacgaggacagctcagagggccaggtgcagtgccggcccagctag

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