Peromyscus maniculatus bairdii (prairie deer mouse): 102904707
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Entry
102904707 CDS
T11302
Symbol
Casc3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03013
Nucleocytoplasmic transport
pmav03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102904707 (Casc3)
03015 mRNA surveillance pathway
102904707 (Casc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmav03019
]
102904707 (Casc3)
Messenger RNA biogenesis [BR:
pmav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102904707 (Casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
102904707
NCBI-ProteinID:
XP_006971883
Ensembl:
ENSPEMG00000009774
UniProt:
A0A6I9KVT1
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Position
8:85781875..85808721
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AA seq
700 aa
AA seq
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MADRRRQRASQDTEDEESGASGSDSGSPARGGGSCSGSAGGGGSGSLPSQRGGRGGGLHL
RRVESGGVKSAEESECESEDGMEGDAVLSDYESAEDSEGEEEYSEEENSKVELKSEANDA
ADSSAKEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPAYIP
RKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYD
IRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIGDRSNKSHRHQGPGGTLPPRTFINRNAAG
TGRMSASRNYSRSGGFKEGRTGYRPVEVGGQHGGRSGETHKHEANYRSRRLEQTPMRDPS
PEPDAPLLGSPEKEEAASETPATVPDTVPPAPDRPIEKKSYSRARRTRTKVGDAVKAAEE
VPPPSEGLTSAAAIPETTPPPAAKTGNWETPVDSTTGGLEQDVAQLNIAEQNWSPGQPSF
LQPRELRGMPNHIHMGAGPPPQFNRIEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHISIM
EGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQSPAPLPNPGLYPPP
VSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQVYGG
VTYYNPAQQQVQPKPSPPRRTPQPVSIKPPPPEVVSRGSS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcgtcggcagcgcgcttcccaggacacggaggacgaagaatccggtgct
tcgggttccgacagcggctctccggcgcggggcggcggcagctgcagcgggagcgccggc
ggcggcggcagtggctcgctgccttctcagcgcggcggccgcggcgggggcctccatctg
cggcgggtggagagcgggggcgtcaagagcgcggaggagtcggagtgtgagagtgaagat
ggcatggaaggcgatgctgttctttccgattatgaaagtgcggaagattcagaaggtgaa
gaagaatacagtgaagaggaaaactccaaagtggagttgaaatcagaggctaatgatgct
gctgattcctcagcaaaagagaagggagaagaaaagcctgatactaaaggcactgtgacc
ggagagaggcaaagcggggatggacaggagagcacagagcctgtagagaacaaagtgggt
aaaaaaggccctaagcatttggatgatgatgaagatcggaaaaatccagcatatataccc
aggaaagggctcttctttgagcatgatcttcgaggacaaactcaggaagaggaagttcga
cccaaaggacgtcagcgaaagctatggaaggatgagggtcgctgggagcatgataagttc
cgtgaagatgaacaggccccaaagtcccgacaggagctcattgctctttatggctatgat
attcgatccgctcacaatcctgatgacatcaaaccccgaagaatccggaaacctcgattt
ggaagtcctccacaaagagatccaaactggattggtgatcgatcaaacaagtcccatcgc
caccagggtcctgggggtaccctaccaccaaggacatttattaacaggaatgcagcaggt
actggccgcatgtctgcatccagaaattattctcgatctgggggcttcaaggaaggtcgt
actggttataggcctgtggaggttggtgggcagcatggtggccggtctggtgagactcat
aagcatgaagctaattaccggtcacggcgtctggagcagactcctatgagggatccatct
ccagaaccagatgctccattgcttggcagtcctgagaaagaagaggcggcctcagagaca
ccagctactgttcctgacactgtaccaccagctcctgacaggcccattgagaagaaatcc
tattcccgggcaagaaggacccggaccaaagttggggatgcagtcaaagctgctgaggag
gttcctcctccatctgaagggcttacttcagcagccgcaatcccagaaacaactccacct
ccagctgctaagactgggaactgggagactccagtagattctaccacaggtggactggag
caagatgtggcacagctcaatatagcggaacagaactggagtccaggacagccttccttc
ctccaaccacgggagcttcgaggtatgcccaaccacatccatatgggagcaggacctcca
cctcagtttaaccggattgaagaaatgggtgtccagggtggtcgagctaaacgttattca
tcccagcggcagagacctgtgccagagcctcctgctcctcctgtgcatatcagtatcatg
gagggacattactacgatccattgcagttccagggaccaatctatacccatggtgacagc
cctgctccactgcctccccagggcatgattgtacaaccagaaatgcaccttcctcaccca
ggtttacatccccatcagtcaccagcacctctgcccaatccgggtctctacccaccacca
gtgtccatgtctccaggacaaccaccaccccagcagttgcttgctcctacttacttttcc
gctccaggtgtcatgaattttggtaaccccagttacccttatgctccaggagcattacct
cctcctccacctcctcatctgtatcctaacacacaggctccatcgcaggtgtatggagga
gtgacctactataaccctgcccagcagcaggtgcagccaaaaccctccccaccccggagg
actccccagccagtctccatcaaaccccctccacctgaggttgtaagcaggggttccagt
taa
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