Peromyscus maniculatus bairdii (prairie deer mouse): 102905302
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Entry
102905302 CDS
T11302
Symbol
Sncaip
Name
(RefSeq) synphilin-1 isoform X1
KO
K04558
synphilin-1
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav05012
Parkinson disease
pmav05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
102905302 (Sncaip)
05022 Pathways of neurodegeneration - multiple diseases
102905302 (Sncaip)
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GFIT
Motif
Pfam:
SNCAIP_SNCA_bd
Ank_2
Ank_4
Ank
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
102905302
NCBI-ProteinID:
XP_006987542
Ensembl:
ENSPEMG00000013269
UniProt:
A0A6I9LSJ0
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Position
19:43732405..43870823
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AA seq
965 aa
AA seq
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MEAPEYLDLDEIDFSDDISYSVTSLKTIPELCRRCDSQNEDRSVSGSSWNCGVSTLITNP
QKPTGIADVYSKFRPVKRVSPLKHQPETLENNENDDQKNNTVEYQKAGETDQGPPPEELS
PEDGVRGLPGKGSEPSQALGELEHYDLDMDEILDVPYIKSSQQLAPFTKVTSEKRILGLC
TTINGLSGKGCPIGSTENATSTMTPFCVLSPVKSPHLRKAKTVLRDQHKLSTEESENSPA
LGKCVPAYESESSSQDFLNKAFSDPHGRKTEKTGPDCKLRAFHLQASAAGPKPEEQVNGM
TWTNGQGSEERSEHLKKVRSILNIVKEGQISLLPHLAADNLDKIHDENGNNLLHVAASKG
HAECLQHLTSLMGEDCLSERNTEQLTPAGLAIKNGQLECVRWMVSETEAIAELSCSKDFP
SLIHYAGCYGQEKILLWLLQFMQEQGISLDEVDQEGNSAVHVASQHGYLGCIQTLVEYGA
NVTMQNHAGEKPSQSAERHGHTLCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVTLQS
QLQQLLEAQKSEGKSLPSSPSSPSSPASRKSQWKILDADDEATGKSKTGAQEGIQVLGSL
SASSRARTKGKDEDSDKILRQLLGKEISENVCTQEKLSLEFQDAQVSSRNSKKIPLEKRE
LKLARLRQLMQRSLSESDTDSNNSEDPKNTPVRKSDRPRPQPIVESVENMDSAESLHLMI
KKHSLASGRRFPFSTKASKYLDGHSPSPTSESSEPDLDSHCPGLGMTPPTQPSADPTQSS
PDSSTAQKVATSPKSALKSPSSKRRTSQNSKLRVTFEEPVVQMEQTSLELNGEKDKDRGR
APQRTSESGEQMKRPFGTFRSIMETLSGNQNNNNNYQPANQLKTCTLPLTSLGRKTADTK
GNPVSPASKGKNKAEMYSSCLHLPSNVRVEEHLRDYARHNDINRNMKKTYNKKHIAEPES
KELFL
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggaagcccctgaataccttgatttggatgaaattgactttagtgatgacatttcttat
tcagtcacgtctctcaagaccattccagaactgtgcagaagatgtgactcacaaaatgaa
gacagatcagtttctggctctagctggaattgtggtgtctcaactctcattacaaaccca
caaaagcccactggaatcgctgatgtatacagtaagttccgcccggtgaagcgcgtttct
ccactgaaacatcagccagagactctggaaaacaatgaaaatgatgaccaaaagaacaat
acggtggaataccagaaagcaggggagactgaccagggccccccacctgaggaactcagc
cctgaagatggagtcagggggttgccaggtaagggctcagagcccagccaggcactgggc
gagctggagcattatgaccttgacatggatgagattctggatgtgccttacattaaatcc
agtcaacagctggccccgttcaccaaggtgacgtcagaaaaaaggattttgggtttatgc
acaaccatcaatggcctgtctgggaaaggctgccctattggaagcactgagaacgccaca
tccaccatgactccgttctgtgttctttctcctgtgaaaagccctcacttaaggaaagca
aagactgtcctccgggaccagcacaagctctccacagaagagtctgagaactcacctgct
ctgggtaaatgtgtccctgcatatgagtcagaaagcagcagtcaagacttcctaaacaag
gcctttagtgacccccatggtcgaaaaacggagaagacggggccagactgcaagctcagg
gcctttcacctgcaggcctcagcggcagggcccaaaccggaagagcaggtcaacggcatg
acctggaccaacggccaaggctcagaagaaaggagtgagcacctgaagaaagtgagaagc
atactgaacattgtgaaggaaggacagatttcgctcttgccacacctagctgcagacaat
ctggacaaaattcacgacgagaatggcaacaatctgttacacgttgctgcatcgaagggc
catgcagaatgcctgcaacacctcacctctctgatgggcgaagactgtctcagtgagcgg
aacacagagcagctgactcccgccggcctggccatcaagaatggtcaactggagtgtgta
cgctggatggtgagtgagacagaagccattgcagaattgagttgttccaaggatttcccg
agccttattcattatgcaggttgctatgggcaggagaagattctcctgtggcttcttcag
ttcatgcaagaacaaggcatctcactggatgaagtggaccaggaaggcaacagcgctgtt
cacgtcgcctcacagcatggctaccttggatgcatacagaccctggtggagtatggagca
aatgtcaccatgcagaaccacgctggggagaagccctcccagagtgctgaacgccacggg
cacaccctgtgctcccggtacctagtggtggtagagacctgcatgtccctggcctcacaa
gtggtaaagctgaccaagcagctaaaggagcagacagtggagcgtgtcacactgcagagc
caactccaacaacttctagaagcccaaaagtcagagggcaaatcactcccgtcttcaccc
agttcaccctcctcaccagcttctagaaagtcccagtggaaaattctagatgcagatgat
gaggctacaggcaagagcaaaacaggagcccaggaaggaatacaagttcttggaagctta
tcagcatccagcagggctaggaccaaaggaaaagacgaagactctgacaaaatcctacgt
cagttattggggaaagaaatctcagagaatgtctgtacccaggaaaagctgtcattggaa
ttccaagatgcgcaagtatcctctaggaattcgaaaaaaatacctctagagaagagggag
ctgaagctagccaggctgaggcagctgatgcagagatcattgagtgagtctgatacagac
tcaaacaattctgaagaccccaaaaatactcctgtgagaaaatcagacaggcccaggcca
caacccattgtggaaagtgtggagaatatggacagtgcagaaagcttacacctgatgata
aagaaacactctctggcatcaggacgcaggtttcctttcagtacaaaggcctccaaatac
ctggatgggcacagcccatctcccacttcagagagcagtgaaccagacttggactctcat
tgtccaggcttggggatgactcctccaacccagccttctgcagaccccactcagtccagc
cctgacagctccactgcccagaaagttgccacaagccccaagagtgccctcaagtctcca
tcatccaagcgccggacatcccaaaactcaaaactcagagttacctttgaggagcctgtc
gtgcagatggagcaaacgagccttgaactaaatggagaaaaagacaaagataggggcagg
gccccccagaggactagtgaatcaggggaacaaatgaaaaggccttttggcacgttccga
tccatcatggagactttaagtgggaatcaaaacaacaataataactaccagccagccaac
cagctgaagacctgcacactgcccttaacatcactcggaaggaagacagcagataccaag
ggaaatcctgtgagccctgctagcaaaggaaagaacaaggcagagatgtacagcagctgt
ctccatcttccctctaacgtgcgggttgaagagcatctgcgtgactacgcacggcataat
gacatcaatagaaacatgaagaaaacctacaacaaaaagcacattgctgagccagagtca
aaggaactcttcttatga
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