Peromyscus maniculatus bairdii (prairie deer mouse): 102905476
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Entry
102905476 CDS
T11302
Symbol
Bmal1
Name
(RefSeq) basic helix-loop-helix ARNT-like protein 1 isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04710
Circadian rhythm
pmav04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
102905476 (Bmal1)
09159 Environmental adaptation
04710 Circadian rhythm
102905476 (Bmal1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmav03000
]
102905476 (Bmal1)
Transcription factors [BR:
pmav03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
102905476 (Bmal1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
bHLH_INO2
PAS_2
bHLH_NCOA
bHLH_NPAS4
PAS_8
bHLH_SAC51
Motif
Other DBs
NCBI-GeneID:
102905476
NCBI-ProteinID:
XP_076406613
Ensembl:
ENSPEMG00000011047
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All DBs
Position
1:123267335..123373448
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AA seq
626 aa
AA seq
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MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSATDYQESMDTDKDDPHGR
LEYAEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ
HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL
NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC
SGARRSFFCRMKCNRPSVKVEEKDFASTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE
DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI
LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW
FSFMNPWTKEVEYIVSTNTVVLANVLESGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT
VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI
LNGGTPDIPSTGLLPGQAQETPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM
AVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccagagaatggacatctcctccacaatcagtgacttcatgtccccaggcccc
accgacctgctctccagttccctgggcaccagtggcgtggactgcaaccgcaagaggaaa
ggcagtgccaccgactaccaagaaagtatggacacagacaaagatgatcctcacggaagg
ttagaatatgcagaacaccaaggaaggatcaagaatgcaagggaggcccacagtcagatt
gaaaagaggcgtcgggacaaaatgaacagtttcattgatgaattggcttctttggtacca
acatgcaatgcgatgtccaggaagttagataagctcaccgtgctaaggatggctgttcaa
cacatgaaaacgttgagaggtgccaccaacccatacacagaagcaaactacaagcctaca
tttctatccgatgacgaactgaaacacctaattctcagggcagcagatggatttttgttt
gtcgtaggatgtgaccgagggaagatcctctttgtctccgagtctgtcttcaagatcctc
aattatagccagaatgaccttattggccagagtttgtttgactacctgcatcctaaagac
attgccaaagtcaaggaacagctctcttcttcagacaccgccccccgggagcgactcatt
gacgcaaagactggacttccggttaaaacagatataacccccgggccgtcccgactgtgc
tctggagctcgccgctctttcttctgtaggatgaagtgcaacaggccttcggtgaaggtg
gaagagaaggacttcgcctccacctgctcaaagaaaaaagcagatcgaaaaagcttctgc
accatccacagcacaggctatctgaaaagctggccacccacaaagatggggctggacgaa
gacaacgagccagacaacgagggctgtaacctcagctgcctcgtcgcaatcgggcgactt
cattcacacgtggttccacagccagtgaatggggaaataagggtgaaatctatggagtat
gtgtctcgacatgctatagacgggaaattcgtttttgtagaccagagggcaacggctatt
ttggcatatctaccacaggaacttctaggcacgtcgtgttatgagtattttcatcaagat
gacataggacatcttgcagaatgtcacaggcaagttttacagacaagagaaaagatcaca
actaattgctataagtttaagatcaaagatggttcctttatcacactacgaagtcgatgg
ttcagtttcatgaacccgtggaccaaggaagtagaatacattgtctcaaccaacactgtt
gttttagccaacgtcctggaaagcggggacccaactttcccgcagcttacagcatccccc
cacagcatggacagcatgctgccctctggagaaggtggcccaaagaggactcatcccact
gttccaggcattccagggggaaccagagctggggcaggaaaaataggtcgaatgattgca
gaagaaatcatggaaatccacaggataagagggtcatcgccttccagctgtggctccagc
ccactgaacatcacaagtacgcctccccctgatgcctcctctccaggaggcaagaagatt
ctaaatggagggactccagacattccttccactggcctactaccagggcaggctcaggag
accccaggttatccatattctgatagttcttctattcttggtgagaacccccacataggc
attgacatgatagacaacgaccaaggatcaagtagtccaagtaacgatgaggcagcgatg
gctgtcatcatgagcctcttggaagcagatgcaggcctgggcggtcctgttgactttagt
gacttgccatggccgctgtag
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