Peromyscus maniculatus bairdii (prairie deer mouse): 102905858
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Entry
102905858 CDS
T11302
Symbol
Rims1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04517
IgSF CAM signaling
pmav04721
Synaptic vesicle cycle
pmav04723
Retrograde endocannabinoid signaling
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102905858 (Rims1)
09150 Organismal Systems
09156 Nervous system
04723 Retrograde endocannabinoid signaling
102905858 (Rims1)
04721 Synaptic vesicle cycle
102905858 (Rims1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmav04131
]
102905858 (Rims1)
Membrane trafficking [BR:
pmav04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
102905858 (Rims1)
Small GTPases and associated proteins
Rab associated proteins
102905858 (Rims1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
PDZ
FYVE_2
PDZ_6
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
102905858
NCBI-ProteinID:
XP_042122324
Ensembl:
ENSPEMG00000003826
LinkDB
All DBs
Position
21:complement(59211100..59691731)
Genome browser
AA seq
1641 aa
AA seq
DB search
MSSAVGPRGPRPPTVPPPMQELPDLSHLTEEERNIIMAVMDRQKEEEEKEEAMLKCVVRD
MAKPAACKTPRNAESQPHQPPLNIFRCVCVPRKPSSEEGGPERNWRLHQQFESYKEQVRK
IGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNEDKV
VMWVCNLCRKQQEILTKSGAWFFGSGPQQPSQDGTLSDTGTGAGSEVPREKKARLQERSR
SQTPLSTAAASSQDTASPGAPLDRSKGAEPSQQALGPEQKQASRSRSEPPRERKKPPGLS
EQNGKGGLKSERKCVPKSAVQPGEGTAEERERKERRETRRLEKGRSQEYPDRPEKREDGR
VAEDEKQRKEEEYQTRYRSDPNLARYPVKPPPEEQQMRMHARVSRARHERRHSDVALPHT
EAAAAPAEATAADKRAPAATRASPPESPRARAPAAQPPAEHGPLAPRPVPGPAEPPEPRV
PEPLRKQGRLDPGSAVLLRKAKREKAESMLRNDSLSSDQSESVRPSPPKPHRPKRGGKRR
QMSVSSSEEEGVSTPEYTSCEDVELESESVSEKGDLDYYWLDPATWHSRETSPISSHPVT
WQPSKEGDRLIGRVILNKRTTMPKESGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADV
VGHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPP
LESSSSSFESQKMERPSISVISPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQA
TDLPPRVDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKILEPKWNQTFVYSHVHRRDFRER
MLEITVWDQPRVQEEESEFLGEILIELETALLDDEPHWYKLQTHDQSSLPLPQPSPFMPR
RHLHGESSSKKLQRSQRISDSDISDYEVDDGIGVVPPVGYRSSARESKATTLAVPEQQRT
THHRSRSVSPHRGDDQGRPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSPVDHRSR
HMESQYSSEQDSELLMLPRAKRGRSAECLHTTSELQPSLARAKSASTNCLRPDTSLHSPE
RERGRWSPSLDRRRPPSPRIQIQHASPENDRHSRKSERSSIQKQTRKGTASDADRVLPSC
LSRRGYAIPRATDQPVIRGKHPTRSRSSEHSSVRTLCSMHHLAPGGSAPPSPLLTRTHRQ
GSPTQSPPADTSFSSRRGRQLPQVPVRSGSIEQASLVVEERTRQMKMKVHRLKQTAGSGS
SQELDREQYSKYNVPNDQYRSCDNVSAKSSDSDVSDVSAVSRTSSASRLSSTSFMSEQSE
RPRGRISSFTPKMQGRRMTSGRAIIKSTSVSGEMYTLEHNDGSQSDTAVGTVGAGGKKRR
SSLSAKVVAIVSRRSRSTSQLSQTESGHKKLKSTIQRSTETGMAAEMRKMVRQPSRESTD
GSIHSYSSEGNLIFPGVRVGPDSQFSDFLDGLGPAQLVGRQTLATPAMGDIQIGMEDKKG
QLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFD
ESPQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPPSSLVDPTLTP
LTRRASQSSLESSSGPPCIRS
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggccgtggggccccgcggtcctcgcccacccacggtgcctccccctatgcaa
gaactgcccgacctgagccacctgaccgaggaggagaggaacattatcatggcagtgatg
gaccggcagaaggaagaggaggaaaaagaagaggccatgctcaagtgtgttgtcagggac
atggcgaagcctgctgcctgcaaaacacccagaaatgctgaaagccagccccatcagcca
ccactgaacattttcagatgtgtctgtgttcccagaaagccaagcagcgaagagggaggc
ccagaaagaaactggagattgcatcaacagtttgaaagctataaggagcaagtgagaaaa
atcggagaggaagcaaggcgttaccagggcgagcacaaagacgatgccccgacatgtgga
atctgtcataagacaaagttcgctgatggatgtggccatctttgctcgtattgtcgcacc
aagttctgtgcacgctgtggaggccgtgtgtctctgcgatcgaacaatgaggacaaagtg
gttatgtgggtatgcaatttatgtcgaaagcaacaagaaatcttaaccaaatctggagcg
tggttcttcggaagcggcccccagcagcccagtcaggatgggactctgagcgacacaggt
acaggtgctggatctgaggtgcccagagaaaagaaagcaagactccaagagcgatcgagg
tcccagacacccctgagcacagcagccgcctcttcccaggacacggcgtcccctggtgca
cccctggacaggagcaaaggggctgagccttcacagcaagccttgggacctgaacagaag
caggcatcaaggtctagaagtgagccccccagggaaaggaagaagcctccagggctttcg
gagcagaatggcaagggaggcctgaagagcgagcgcaaatgcgtgcctaagtccgcggtg
cagcccggggaggggaccgcggaagagcgggagcggaaggaaaggcgggaaacccgcagg
ttggagaaagggcgctcccaggagtacccggaccggccggagaaacgagaggatggcagg
gtggcggaggacgagaagcagaggaaagaggaggagtaccagaccaggtaccgcagcgac
ccgaacctggcgcgctaccccgtgaagccgcctcccgaggagcagcagatgcgcatgcac
gcccgggtgtcccgcgcgaggcacgagcggcgccacagcgacgtggcactcccgcacacc
gaggctgcagccgcgccggccgaggccacggcggcggacaagcgcgcgccagccgccacc
agggcctctccgcccgagtccccccgcgcgcgcgcgcccgccgcccagcctcccgccgag
cacggcccgctggcgccacggcccgtcccgggtcccgcagagccgcccgagccgcgcgtc
cccgagccgctccgtaagcagggccgcctggacccgggctcggccgtgctcctgcgcaag
gccaagcgcgagaaggcagagagcatgctgcggaacgactcgctgagctccgaccagtcc
gagtccgtgcgaccgtccccgcccaagccgcaccggcccaagcggggaggcaagaggcgg
cagatgtcggtgagcagctcagaggaagagggcgtgtccaccccggagtacaccagctgc
gaggacgtggagctggagagcgagagcgtgagcgagaaaggtgatttggattactactgg
ttggatcctgcgacgtggcacagccgggaaacgtcgcctatcagttcgcatcctgtaacg
tggcagccgtcaaaagagggagaccgattaattggccgtgttattcttaacaaaagaaca
accatgcccaaagaatcaggtgcattattgggtctgaaagtggttggaggaaaaatgaca
gatttaggacgtcttggtgctttcatcaccaaagtaaagaagggtagcctggcagatgta
gttggacacctaagagcaggggatgaagttctagagtggaatggtaaacccctgccggga
gcaacaaacgaagaagtttacaacattattttagaatcaaaatcagaacctcaagttgaa
attattgtttcaaggcctattggtgacatcccccggatccctgagagttcccatcctccc
ctggagtccagctcaagttcctttgaatctcagaagatggaaaggccttccatttctgtt
atttctccaaccagccctggagctctgaaagacgccccccaagtcctgccagggcaactc
tctgtgaagctgtggtatgataaagtgggacatcagctgattgtgaatgttctacaagca
actgatctaccccctagagtagatgggcgtcccaggaatccctatgtaaaaatgtatttt
cttccagatagaagtgacaagagtaaaagaaggacgaagacagtgaagaaaattctagaa
ccaaaatggaaccaaacatttgtctactcacatgtccatcgtagggatttccgagagcga
atgttagaaattaccgtgtgggatcagccgagagtgcaagaggaagagagtgaatttctt
ggagagattctcatagaattggaaacggcgcttttagatgatgagccccactggtataaa
ctccagacacatgatcaatcctcactacctctgcctcagccgtccccgttcatgccaagg
cggcatcttcatggagagagctccagcaaaaaactacaaagatctcagcgaatcagtgat
agtgacatctcagattatgaggttgatgatggtattggagtagtgcctccagtgggttat
agatctagtgctagagaaagtaaagcaacaacattagcagtgccagagcagcaaagaaca
actcatcaccgctcccgctcagtgtctcctcatcgcggcgatgatcagggaaggccgcgc
tcacgtttaccaaatgtgccattacagaggagcttagatgaaattcatccaacacgaagg
tcacgttctccaaccagacaccatgatgcctcccgaagtccagtcgatcacagatccaga
catatggaaagtcagtattcatcagaacaagacagtgagcttctcatgctgcccagagca
aaacgaggacgaagtgcagaatgcctacacacgaccagtgagctacagccctcccttgcc
agggctaagagtgctagtaccaactgcttgagaccagacactagtttgcattcaccagaa
cgagaaaggggtagatggtccccctccctagataggaggcgacctcctagccccaggatt
caaatccagcatgcatctccggagaatgacaggcactccagaaagtctgaaagatctagc
atccaaaaacagactaggaaaggcacagcctctgatgcagacagggttctcccatcatgc
ctttctagaaggggatacgcaatcccaagagcaactgatcaaccagtcattaggggaaag
catcccactcgctcccggtcgagcgagcactctagtgtcagaaccctgtgttctatgcac
caccttgcccctggagggtcggcgccaccttctccgcttctgacaagaacgcaccgacaa
ggaagcccaacccagtctcctccagcagacacgtccttcagcagccgccggggaagacag
cttccacaggtgccggttcgaagtggcagtatagaacaagcaagcttagtagtggaggag
cgaaccagacagatgaaaatgaaagtgcaccgattgaagcagacagcagggtctgggtct
agtcaagaacttgatcgcgagcaatattccaagtataacgtacctaacgatcagtacaga
agctgtgataacgtctctgccaagtcatcagacagtgacgtcagtgacgtgtccgccgtt
tcccgaaccagcagtgcctcacgcctcagcagcacaagcttcatgtctgagcagtccgag
cgccccaggggtaggatcagttcatttacccccaaaatgcaaggcagacggatgacttca
ggaagagccatcatcaagagcaccagtgtaagtggagagatgtacacactggagcataat
gatggcagccagtcagacacagctgtggggaccgttggagcaggcggaaagaagcgcaga
tccagcctgagtgccaaagtggtcgccatcgtatcgcggagaagtagaagcacatctcag
ctcagccagacagagtcgggccacaagaagttaaaaagtaccatccagcgaagtacggaa
acggggatggcggctgaaatgcggaagatggtcagacagccaagccgggagtccacggat
ggcagcatccacagttacagctcggagggaaacttaatatttcctggagttcgagtcgga
cccgacagccagttcagcgacttccttgacggactggggccagctcagcttgttggccgc
caaaccctcgccacccctgccatgggtgatatccaaatcgggatggaggataaaaagggc
caattggaagttgaagttatcagagcccggagccttacacaaaaacctggctccaagtct
acccctgcaccctatgtgaaagtatatcttttggaaaatggagcctgtattgccaaaaag
aagacaagaattgcacggaaaactctcgaccctttgtatcagcagtcccttgtgtttgat
gaaagtccgcagggtaaagttcttcaggtgatcgtctggggtgactacggaagaatggac
cacaaatgctttatgggtgtggctcaaatattgttggaagaacttgatctgtccagcatg
gtgattggatggtataaattgttccctccgtcatcactggtggatcccacactcactccc
ctgacccgtcgggcttcccagtcatctctggagagttcatctgggcctccctgcatccga
tcatag
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integrated database retrieval system
