Peromyscus maniculatus bairdii (prairie deer mouse): 102906312
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Entry
102906312 CDS
T11302
Symbol
Sorcs3
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmav04131
]
102906312 (Sorcs3)
Membrane trafficking [BR:
pmav04131
]
Endocytosis
Others
Others
102906312 (Sorcs3)
Endosome - Lysosome transport
102906312 (Sorcs3)
Endosome - Golgi transport
102906312 (Sorcs3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
102906312
NCBI-ProteinID:
XP_006983363
Ensembl:
ENSPEMG00000016181
UniProt:
A0A6I9LRR0
LinkDB
All DBs
Position
1:200844991..201472314
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AA seq
1220 aa
AA seq
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MEAAGTERPAGWPGAPLARTGLLLLSTWVLAGAEITWGTTGGPGRLVSPASRPPAMPPLL
SRAAMNRWPEELATARRATTLRRRSRLELLPQANGGGEIPAEAEGTSPEDVRWVRGIPAP
STAGSSRRTRRAQPPSTLERGDAWATAPGDGAKGSRPQTKGSREEVKATRTGGPAAEELR
LPSTSFALTGDSAHNQAMVHWSGHNSSVILILTKLYDFNLGSVTESSLWRSTDYGTTYEK
LNDKVGLKTVLSYLYVNPTNKRKIMLLSDPEMESSILISSDEGATYQKYRLTFYIQSLLF
HPKQEDWVLAYSLDQKLYSSMDFGRRWQLVHERITPNRFYWSVSGLDKEADLVHMEVRTA
DGYAHYLTCRIQECAETTRSGPFARSIDISSLVVQDEYIFIQVTIGGRASYYVSYRREAF
AQIKLPKYSLPKDMHIISTNENQVFAAVQEWNQNDTYNLYISDTRGIYFTLAMENIKSSR
GLMGNIIIELYEVAGIKGIFLANKKVDDQVKTYITYNKGRDWRLLQAPDVDLRGSPVHCL
LPFCSLHLHLQLSENPYSSGRISSKDTAPGLVVATGNIGSELSYTDIGVFISSDGGNTWR
QIFDEEYNVWFLDWGGALVAMKHTPLPVRHLWVSFDEGHSWNKYGFTLLPLFVDGALVEA
GVETHIMTVFGHFSLRSEWQLVKVDYKSIFSRRCTKEDFETWHLLNQGEPCVMGERKIFK
KRKPGAQCALGRDYSGSVVSEPCVCADWDFECDYGYERHGESQCIPAFWYNPTSPSKDCS
LGQSYLNSTGYRRIVSNNCTDGLREKYSAKTQLCPGKAPRGLHVVTTDGRLVAEQGQNAT
FIILMEEGDLQRTNIQLDFGDGIAVSYANFSPIEDGIKHVYKSAGIFQVTAYAENSLGSD
TAVLFLHVVCPVEHVHLRVPFVAIRNKDVNISAVVWPSQMGTLTYFWWFGNSTKPLITLD
SSISFTFLAEGTNTITVQVASGNALIQDTKEIAVHEYFQSQLLSFSPNLDYHNPDIPEWR
QDIGNVIKRALVKVTSVPEDQILVAVFPGLPTSAELFILPPKNLTERRKGNEEDLEQIVE
TLFNALNQNLVQFELKPGVQVIVYVTQLTLAPLVDSSAGHSSSAMLMLLSVVFVGLAVFL
IYKFKRKIPWINIYAQVQHDKEQEMIGSVSQSENAPKITLSDFTEPEELLDKELDTRVIG
GIATIANSESTKEIPNCTSV
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcaggcaccgagcgccccgcaggctggcccggggcgcccctcgcccggacg
gggctgctactcttgtctacgtgggtcctggccggcgccgagatcacttggggcacgacg
ggaggtcccgggcgcctggtgtctccggcttcacggccaccagcgatgcctcctctcttg
tcacgggcagcgatgaaccggtggcccgaggagctggcgactgcacggagagccactacg
ctgaggcgcaggtctcggctggagctactgccccaggcgaacggcggcggggagataccg
gctgaagctgagggaacctcgcctgaagacgtgaggtgggttcggggcatcccggctcct
agcacggcgggcagctcgaggaggactcgccgggcacagccccccagtaccctggagcgc
ggggacgcttgggctactgctcccggagatggtgccaaaggaagccgccctcaaaccaag
ggttcccgggaagaggtgaaggcgacgcggactggaggaccggcggctgaggagctcagg
ctgcccagcacgtcttttgcgctgactggggactcggcccacaatcaagctatggtgcac
tggtcgggacacaacagcagcgtgatcctgatcctgaccaagctgtatgacttcaacctg
gggagtgtgactgagagttctctgtggaggtcaacagattatggcaccacctatgaaaaa
ctaaatgacaaagtgggtttgaagacggtcctcagttacctctatgtcaaccccaccaac
aaaaggaagatcatgcttcttagtgatcctgaaatggagagcagtatattgatcagctca
gacgaaggggcaacttaccagaagtatcggctcacattctacatccagagcctgctcttc
catcccaagcaggaggactgggtgctggcctacagcttggatcaaaagctttatagctcc
atggactttggaagacgatggcaactcgttcacgagcgcatcacacccaacagattttat
tggtcggtgtctggattggataaggaggcagacctggtgcacatggaagtgaggacagca
gatggatatgcccactacctcacctgcaggatccaggaatgtgctgagacaactcggagt
ggcccctttgcccgctccattgacatcagctctctggttgtccaggatgagtatatcttc
attcaggtaacaataggtggaagagccagctactacgtgtcctatcgaagagaagccttt
gcccagataaagctgcccaagtactccttgccaaaggacatgcacatcatcagtacaaat
gagaaccaagtgtttgcagccgtccaagaatggaaccagaatgacacgtacaacctctac
atctcagacacacgtgggatctactttactctggctatggagaacattaagagcagccga
ggtctaatgggaaacatcattattgaattatatgaggtagcaggtatcaaggggatattc
ctggcaaacaagaaggtggatgaccaggtgaagacatacatcacttacaacaaaggcagg
gattggcgactactacaagctccagatgtggacctgagaggaagcccagtgcactgctta
ctgcccttctgttccttacaccttcatctgcagctctctgaaaacccatattcctcaggg
agaatctctagcaaggacacagcccctggacttgtggtggccacaggcaacattggctcg
gaactctcctatacagatatcggtgtgttcatctcttctgatgggggcaacacatggaga
cagatctttgatgaagagtacaatgtctggttcctagactggggtggcgccctcgtggcc
atgaaacacacacctctgccagtcaggcacttgtgggtgagttttgatgagggccactcc
tggaacaaatatggtttcacattgctgcctctcttcgtggatggggcgttggtggaggca
ggagtagagacccacatcatgacagtttttggccacttcagcctacgctccgaatggcag
ttggtgaaagtggactacaagtctatcttcagccggcgctgcaccaaggaggactttgag
acttggcacctgctcaatcagggagagccttgtgtcatgggggaaaggaaaatattcaag
aaacgcaagccaggtgctcagtgtgcccttggcagagactactctgggtcggtggtatca
gaaccctgtgtctgtgctgactgggactttgaatgtgactatggctatgaaagacatggg
gaaagccagtgtatcccagctttctggtataacccaacttccccctcaaaggactgcagc
cttggccaaagctaccttaatagcactgggtaccggaggattgtgtccaacaactgcaca
gatgggttaagggagaagtactctgctaagactcagctgtgtcctggaaaagctcctcgg
ggcctccatgtggtcaccactgatgggcgcctggtggcagagcagggtcagaatgcaacc
ttcatcattctaatggaagagggtgacctccaaaggacaaacatccagcttgactttggg
gatgggattgctgtgtcctacgccaatttcagccccattgaggatggcatcaagcacgtg
tacaagagtgcggggatcttccaggtgacagcctatgcagagaacagtcttggctctgat
acagctgtcctcttcctgcatgtggtttgtccagtggaacacgttcaccttcgagttcca
tttgtcgccataagaaacaaggatgtgaacatcagtgcagttgtgtggcccagtcagatg
gggacccttacctacttctggtggtttggcaatagcacaaagcccctcatcaccttggac
agcagcatctctttcacattccttgcagaaggaaccaacaccatcactgtgcaggtagct
tctgggaatgctctcatccaagacacaaaggagattgcagtacatgaatatttccagtca
cagctcttatcattctctccaaatctcgattaccacaatcctgatattcctgagtggagg
caagacattggcaatgttataaagcgagctctggttaaggtgaccagtgtcccagaagac
cagattcttgtggctgtgttcccaggtctccccacttcagcagagcttttcatccttcca
cctaagaacttgacagaaaggaggaaaggtaatgaagaggatctagaacaaattgtagag
acactatttaatgcattaaaccaaaacttggtacagtttgagctgaagccaggggtccag
gtcattgtatatgtcacacagctgacattagctccactggtggactccagcgctgggcac
agcagctctgccatgcttatgctcctgtcggtggtgtttgtcggcttggctgtatttctc
atctacaagtttaaaaggaaaatcccctggatcaacatctatgcccaagtccaacatgac
aaggaacaggagatgatcgggtcagtgagccaaagtgaaaacgccccgaaaatcacactc
agtgatttcaccgagcccgaggagctgctggacaaagagctggacacacgggtcatagga
ggcattgctaccattgcaaacagcgagagcacaaaggagatccccaactgtactagtgtt
taa
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