Peromyscus maniculatus bairdii (prairie deer mouse): 102906714
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Entry
102906714 CDS
T11302
Name
(RefSeq) ATP-binding cassette sub-family A member 17-like isoform X4
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102906714
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmav02000
]
102906714
Transporters [BR:
pmav02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
102906714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
RsgA_GTPase
AAA_15
AAA_29
MMR_HSR1
TpcC
Motif
Other DBs
NCBI-GeneID:
102906714
NCBI-ProteinID:
XP_015853152
Ensembl:
ENSPEMG00000007117
LinkDB
All DBs
Position
8:complement(12813684..12889173)
Genome browser
AA seq
1736 aa
AA seq
DB search
MAVFKKLKLLLWKNFILKKRKTLITLLELLMPLLFSTIVLYLRFNSMPKHVSTTNYQPIN
ISLLPIYFNKYPLKNKFQLAYIPSKSETLKAVTEMVEQTFAVDFEVLGFPSVPLFENYII
KDPRSFYILVGIVFDHTFNSSSEPLPLVVKYDLRFSYVQRNFAPSLNYLFFQEELEGWCT
AFLYPPNPSQEPREFVYADGGNPGYNKEGFLAIQHAVDKAIMWHHDPNATLNMFKNLHVL
LQRFPFGPHIKDPFLVILQNEFPLLLMLSFICVELIIINSILLEKEKKLKEYMCMMGLES
WLHWVAWFITFFISVLIVVSVMTILFCAKVDSVAVFTNSNPSLIFIFLMCFATATIFFAF
MMSTFFQRAHVGTVIGGIVFFFTYLPYIYITFSYHQRTYVQKIASCLFSNVAMAIGVRFI
SLFEAEGTGIQWRNIGSIQGDFSFIQVVLMLLLDSLLYCLIGFLAESLFSGKFGIPTSWY
FFAKCLFCVKKPVPVILPLLDIGDPEKPARRDFMQEELADQMKAIEIQHLYKVFYRGRRK
CIAVKDLSVNLYKGQITVLLGHNGAGKTTICSILTGLISPSKGQAYVLGCEVSKDLAQVR
KSLGWCPQHDILFDNFTVTDHLSFYGQLKGLSRQNCHEEIEEMLPLLGLKDKWNSRCKFL
SWGMKRKLSLGIALIADSKVLILDEPTSGMDSTSRRAIWDILQQQKSDRMILLTTHFMDE
ADLLGDRVAIMAKGELQCCGSPPFLKQKYGAGYYMTLIKTPLCDTTKLSSVIYYHIPDAI
LESRIGEEVIFILPKETMPRFEALFTDLEQKQTELGISALGVSVTTMEEVFIRVCKLADS
STNILTEKRPSIQPHPRVHRVPVDRIKYLHSRIFSMQTGLSIKLNTGLCLLCQQFYAMLL
KKVTYSLRNWRLMLFVQILLPLLIIVLSLTFFDFKSKKMENVPLELTLKTYGQTIVPFFV
SDNSLLGPQLSDKFIKMLVAAGQIPLYIQGSVEDFLLKKAKENPEDFDKLYVVAASFEDV
NNRTIVKALFNNQAYHSPGLALTLVDNFLFKLISGANASITTINYPQPLTAEELSESVLY
QGPKGHYLVTNFLFGIAFLSSSFSILTVTEKNIKSKNIQFISGVSAVAFWLSALLWDLIS
FLVPTLLLVLVFFWYKEEAFAHPESTPAVVLIMMLYGWAVIPFIYTVSFSFKTPGNACAK
LVVMLTFLSIGPFVLVTVTSDKDLGYAELSDSLDYIFLIFPGHCLGMAFSNLYYNFELKK
LCNAKNLSDIDCNDVSEGYVVQKNIYAWESLGIGKYLTALAFLGLLYIILIFLIEASTFS
ILKSRLSGFSREKKLGTFLNVTEPEDEDVLDEAETIKFYLETLLKKNPLIVKDVSKVYKE
KVTVLAVNKVSFTVNERECFGLLGLNGAGKTSIFNMLTGEQPITSGNAFVKGFNVKSDLV
KVRQWIGYCPEFDALLNFMTGREILAMYARIRGIPECHIKTCVDQILEDLLMRVYADKLV
KTYSGGNKRMLSTGIAFIGEPAVIFLDEPSTGMDPVARRLLWDTVARARESGKAIVISSH
SMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGSGYSLQAKVQREWQQEALTKFKAFVE
LTFPGSSLEDEHRGMVQYYLPGHNLSWAKVFGIMEQAKKDYMLEDYSINQVSLEDIFLSF
TSTVSSTNRKFHHGQALLDSALSPSHSEPILLPPSGPSSQPATPPPTPSPSEPVLL
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgttcaagaagttaaaacttcttctctggaagaatttcatcttaaagaagcgg
aagactctgataacacttctggaactcttgatgccgttactattttctacaattgtattg
tatcttcgtttcaacagtatgccaaaacacgtatcaactactaactaccaaccaattaat
atcagtttactgccaatatatttcaataagtatcctctgaaaaataaatttcagttggct
tatatcccttccaaaagcgagactttgaaagctgtcactgaaatggtggaacaaaccttt
gctgttgactttgaagtcctaggctttccttcggtgcctttatttgaaaactacataatt
aaggatcccaggtctttctacatactggtgggaattgtttttgaccataccttcaatagc
agcagtgaacctttgccactcgtggttaagtatgacttgcgtttcagttatgttcagagg
aactttgcaccatcactgaactatttattttttcaagaggagctagaaggctggtgcaca
gcctttctttatcctcccaatccaagccaagaaccccgggaatttgtatatgctgatggg
ggaaaccctggatacaacaaagaaggcttcctggcaatacagcatgcagtagacaaagcc
attatgtggcaccatgatcccaacgcaacactcaacatgttcaagaatctccacgtactg
ctgcagagattcccatttgggccccatatcaaggacccattcttagtgatccttcagaat
gagttccctctgctcctcatgctcagcttcatttgtgttgagctcataatcatcaattcc
attttactggagaaggagaagaaactgaaggaatatatgtgtatgatgggactagagagc
tggctgcactgggttgcttggttcattacattcttcatttctgtcttaattgtcgtttct
gttatgaccattctcttttgtgcaaaggtagacagtgtggctgtgttcaccaacagtaat
cctagcttgatatttatttttctaatgtgttttgccactgccacaattttctttgcattc
atgatgagcacgttttttcaaagagcgcatgtaggaactgtgataggtggaatcgtcttc
ttcttcacataccttccctacatatacatcactttcagttatcaccagaggacctatgtc
caaaagatagcctcttgcctcttctcaaatgttgccatggcaataggagtccgattcatc
tctctgtttgaagcagaaggaacaggcatccaatggaggaacataggcagtatccaagga
gactttagcttcattcaggtggtgctgatgctcctgctggactcactcttgtactgtctg
ataggctttttggcagagtctctcttctcaggaaagtttggaatacctacgtcttggtac
ttctttgccaagtgcctgttctgtgtcaagaagcctgttccagtaatactgccacttctg
gacatcggggatcctgagaaacctgcaaggagagacttcatgcaggaggagctagctgat
caaatgaaagcaattgaaatccagcatctatataaggtcttttacaggggacggcgtaaa
tgcatagctgtcaaggatctgagtgtgaacctgtacaaggggcagatcaccgttctcctg
ggacacaacggggcagggaaaaccaccatctgctccattcttacaggtcttatttcccct
tcaaagggacaggcatatgtccttgggtgtgaagtttcaaaagacttggctcaagttagg
aagagcctgggctggtgcccacaacatgacattttatttgataactttacagtaaccgac
catctttctttctatggtcagttgaaaggcctgtctcgccagaactgtcatgaagaaata
gaagagatgcttcccctcctcggtctgaaggacaagtggaactcgcggtgcaagttcctg
agttgggggatgaagcgcaagctctcacttggcatcgccctcatagctgattccaaggta
ctgattctggacgaacctacctcaggcatggactccacctccaggagggccatctgggac
attcttcagcagcagaagagtgaccgcatgatcctactgaccacccatttcatggatgaa
gctgacctgctgggggaccgcgtggccatcatggccaagggggagctacagtgttgtggg
tcgccaccattcctcaagcaaaaatatggtgcaggatattatatgactttaataaaaaca
cctctctgtgacacaacgaagctttctagtgtgatttattatcacataccagatgcaatc
ttggagtccagaattggagaagaagtgatattcatacttcctaaggagaccatgcccagg
tttgaagctctgtttactgacttggaacagaaacagacagagcttggaatctctgctttg
ggagtctctgtcaccactatggaggaagtgttcatacgagtttgtaagttggctgattct
agcacaaatatcctaactgagaagcgaccctctattcagcctcatccccgagttcacaga
gttcctgttgacagaattaaatatcttcactcaaggatcttttcaatgcagactggcctg
tcaatcaaactaaatactggactctgtcttctctgccaacaattctatgccatgctcctg
aaaaaggtcacatattcgctacgcaactggaggttgatgctgtttgtgcagattctgctg
cctctgctgatcattgtgttaagtctcactttttttgacttcaaatcaaagaaaatggaa
aatgtacccttggagctgacgttaaaaacatatggtcagacaattgttccattttttgtt
tctgacaattccctcttgggtcctcaactttcggataaatttataaagatgcttgtggct
gcaggacagattcctttgtatattcaaggttctgtagaggacttcctactgaaaaaggca
aaagagaaccctgaggactttgataagctctatgtggtggcagcttcttttgaggacgtg
aataaccgcaccatagtgaaggcactgttcaacaaccaggcataccattccccgggcctg
gctctgactctggtggacaatttcctcttcaagttgatttctggtgccaatgcttccatt
accacaatcaactaccctcagcctctgacggccgaagagctctcagagagtgtcttgtac
cagggccctaaaggacattaccttgttaccaactttctttttggaatagctttcctgtca
agctctttctccatcttgacagtcacagagaaaaacattaagtctaagaacatccagttt
ataagcggtgtcagtgcggttgcgttctggctctccgctctgctgtgggatctcatttct
ttccttgtccccactctcctgctagtgttggtgtttttctggtataaggaagaagctttt
gcccatcctgagagcaccccagcggtggtcttgataatgatgctctatggctgggctgtc
atccctttcatctacacagtcagcttctcttttaaaactcctgggaatgcgtgtgctaag
cttgtggtgatgctcaccttcttgagcattggcccctttgtgcttgtcacggtcacaagt
gataaagaccttggctatgcagaactctcagactccttggattatattttcctaatattt
cctggacattgcctgggaatggctttttccaacttgtactataactttgaactaaaaaag
ctttgcaatgctaagaacttgagtgatattgactgcaatgatgtttcagaaggatatgtg
gtccaaaagaacatctatgcctgggaatctctggggatagggaagtacctgacagctctg
gctttcttgggacttttgtacattatcctgattttcctcattgaagccagtacattctcc
atactgaaatccaggctttctggcttttctagggaaaaaaaattggggacattcctcaat
gtaacagagccagaagacgaagatgtactagatgaggcagaaaccatcaagttttatttg
gaaacattactaaagaaaaatccacttattgttaaagacgtgtcaaaggtctataaagag
aaggtaactgtgctggctgtaaacaaggtgtccttcaccgttaatgaaagagaatgcttc
ggccttctgggcctcaatggagctgggaagacttccattttcaacatgctgactggggag
cagccaatcacttcaggaaacgcctttgtcaagggtttcaatgtcaagtctgacctagtg
aaggtgcggcagtggattggttactgtcctgaatttgatgccctgctaaacttcatgaca
ggaagagagatacttgccatgtatgcccgtatccggggcatccctgagtgccacattaaa
acctgtgtagaccagattctcgaggacttactcatgcgtgtgtatgcagacaagctggta
aagacctatagtggcggtaacaaacgcatgctgagcactggcattgccttcatcggagag
cctgcagtcatcttcctagatgagccatccactggcatggaccctgtggcccggcgcctg
ctgtgggacactgtagcccgggcccgggagtctggcaaggccattgtcatctcctcccac
agtatggaggagtgtgaagccttatgtacccggctggccatcatggttcagggccagttc
aagtgcctgggcagcccacaacacctcaagagcaagtttggcagcggctactccctgcag
gccaaggtccagagggaatggcaacaggaggcgctaacgaagtttaaggcattcgtggaa
ctgactttcccaggcagcagtctggaagatgagcaccggggcatggtccagtactacctg
cctggccacaacctcagctgggcaaaggtgtttggcattatggaacaagccaagaaggat
tacatgttggaagactactctatcaaccaggtctctctggaggacatcttcctgagtttc
accagcacagtgtcctccaccaacagaaaattccaccacgggcaagctctcctagacagt
gccttatcaccctctcactctgagcctatcttacttcctccctcaggtccttcctctcag
cctgccacaccacctccaactccatctccttcagagcctgtcctactataa
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integrated database retrieval system
