KEGG   Peromyscus maniculatus bairdii (prairie deer mouse): 102906928
Entry
102906928         CDS       T11302                                 
Symbol
Kdm4b
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
pmav  Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:pmav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pmav03036]
    102906928 (Kdm4b)
Enzymes [BR:pmav01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     102906928 (Kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     102906928 (Kdm4b)
Chromosome and associated proteins [BR:pmav03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    102906928 (Kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD LBR_tudor SLX1_C DUF7141
Other DBs
NCBI-GeneID: 102906928
NCBI-ProteinID: XP_076414786
Ensembl: ENSPEMG00000021576
LinkDB
Position
22:8606717..8696406
AA seq 1101 aa
MGSEDHSAQNPSCKIMTFRPTMDEFRDFNRYVAYIESQGAHRAGLAKIIPPKEWKPRQTY
DDIDDVVIPAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLANSEKYCTPRHQDFDDLER
KYWKNLTFVSPIYGADISGSLYDDDVAQWNIGNLRTILDMVERECGTIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLR
HKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKVATQCTCRKDMVKISMDVFVRILQPERYEQWKQGRDLTVLDHTRPTALSSPELSSWSA
SRASLKAKLLRRQISVKENRPWRKAEEERRPSLERRREPTRRPGPASHRRRSQPKKCKPE
DSKSPGEAAAGVAGLDEAGGCSREEATPEDEDEDEEMLPSQSHEAGPCMEEDGRGKPRPT
KARSKKKTPSPLSPLLPPAPPTLSPTEEGLRPPPPPKSPVPTMGPMAAEGGPPPAPLNVV
PPGAPGEEAEVRPRPIIPMLYVLPRTNTTDGDRERTAHPQLAPMELGLEDEGQAQAGSAQ
APSSFSKLKVEIKKSRRHPLGRPPTRSPLSVVKQEASSDEEGFLFSGEDDVSDPEALKSL
LSLQWKNKAASFQAERKFNAAAALHEPYCAVCTLFYPYSQSVQTEREIPATPGDSTVQPP
SKSGQRTRPLIPEMCFTSSGENTEPLPANSYVGEDGTSPLISCAHCCLQVHASCYGVRPE
LAKEGWTCSRCAAHAWTAECCLCNLRGGALQTTTEHRWIHVICAIAVPEVRFLNVIERNP
VDVSAIPEQRWKLKCVYCRKRMKKVSGACIQCSYEHCSTSFHVTCAHAAGVLMEPDDWPY
VVSITCLKHRAGGPGGQLLRAVSLGQVVITKNRNGLYYRCRVIGSTAQTFYEVNFDDGSY
SDNLYPESITSRDCLRLGPPPEGELVELRWTDGNLYRARFISAATSLIYQVEFEDGSQLT
VKRGDIFTLEEELPKRVRSRLSLSTGTPQEPSFSGEDVKAAKRPRVATMLATTTEDTGHS
PEYLAFVESLLQAQGRPGAPF
NT seq 3306 nt   +upstreamnt  +downstreamnt
atggggtccgaggaccacagcgcccagaaccccagctgcaaaattatgaccttccgcccc
accatggacgagttccgggacttcaacagatacgtggcctacatcgagtcacaaggtgcc
caccgcgcaggcctagccaagatcatcccacccaaggagtggaagccacggcagacgtat
gacgacattgatgatgtggtcatcccagcacctattcagcaggtggtgacaggccagtcg
gggcttttcacacagtataacatccagaagaaggccatgaccgtgggcgagtaccgccgc
ctggccaacagtgagaagtactgtaccccacgccaccaagactttgacgacctggaacga
aagtactggaagaacctgaccttcgtctcgcccatctacggggccgacatcagtggctct
ctgtatgatgatgacgtggcccagtggaacatcggcaacctgaggaccatcctggatatg
gtggagcgtgagtgcggcaccatcatcgagggtgtgaacacaccctacctgtacttcggc
atgtggaagaccacttttgcctggcacactgaagacatggacctgtacagcatcaactac
ctgcacttcggcgagcccaagtcctggtacgccatcccaccggagcacggcaagcgcctg
gagcgcctggccataggcttcttccctgggagctcacagggctgtgatgctttcttgagg
cacaagatgacactcatctcgcccatcatcctgaagaagtatggcatccccttcagccgg
atcacccaggaagctggggagttcatgatcactttcccctatggttaccacgcgggcttc
aaccatggcttcaactgtgcagagtccaccaactttgccacgctacgctggattgactat
ggcaaagtggccacacagtgcacatgtcgcaaggacatggtcaagatctccatggatgtg
ttcgtacgcatcctgcagcccgaacgctatgagcagtggaagcagggccgcgacctcact
gtgctggaccacactcggcccacagccctgagcagccctgagctgagctcctggagcgcc
tcacgggcctcactgaaggccaagctcttgcgcagacaaattagtgtgaaggagaacaga
ccctggagaaaggctgaggaggagaggaggccgagtctagagaggaggcgggagccgacc
aggaggccagggccggcgtcgcaccggagacggagccagcccaagaagtgcaagcccgaa
gactccaagtctcctggggaggcggcggctggggtggctggtctggacgaggctgggggc
tgttcccgggaggaggccacacctgaggacgaggatgaggatgaggaaatgctgccctca
cagagccacgaggccgggccatgcatggaagaggatggcagaggcaagccccggccaacc
aaggcccggagcaagaagaagacccccagccccctgtcacccctgttgccgcctgcccca
ccaaccctgtcacccaccgaggagggcctgaggccaccacccccacccaagtctccggtt
ccaaccatgggccccatggccgcagaggggggtcctccaccagcacccctcaatgtggtg
cctcctggggcaccgggtgaggaggcagaggtgcggccgaggcccatcatccccatgctg
tatgtgcttccccgcaccaacaccaccgatggggaccgggagcgcactgcccaccctcag
ctggcacccatggagctgggactggaagacgaaggccaggcccaagccggcagtgcgcag
gccccgtcctccttctctaagctgaaggtggaaatcaaaaagagccgtcgtcaccccctg
ggtcggccacccacacggtccccactgtctgtggtcaagcaggaggcttccagtgatgaa
gaaggcttcctgttctcaggagaggacgatgtgagtgaccccgaggccttgaagtccctg
ctgtcgctgcagtggaagaacaaggcggccagtttccaagctgagaggaagttcaatgcg
gcagccgccctccacgagccctactgcgccgtctgtacgctcttctacccctacagccag
tcagtacagacagagcgggagatcccggccactccgggggacagcactgtccagccaccc
tcgaaaagtggccagaggacacgaccactgatccctgagatgtgcttcacttcgagtggg
gagaacacggagccactgcctgccaattcctatgtcggcgaggatggcaccagcccactc
atttcctgtgcccactgctgcctgcaggtccacgccagttgctacggtgtccggcctgag
ctggccaaggagggctggacatgctcccggtgtgcggcccatgcctggactgcggaatgc
tgtctgtgcaacctccgcgggggagcgctgcagacgaccacggagcacaggtggattcac
gtgatctgcgccattgcagtccccgaggtacggttcctgaacgtgattgagcgcaaccct
gtggacgtcagtgccatccctgagcagcggtggaaactgaagtgtgtgtactgccgcaag
cgcatgaagaaggtgtccggcgcctgcatccagtgctcctacgagcactgctccacgtcc
ttccacgtgacctgcgcacatgcagctggtgtcctcatggagcccgacgactggccctat
gtagtgtccatcacctgcctcaagcacagagcaggtggccctgggggtcagctcctgcgc
gctgtgtccctgggccaggtcgtcatcaccaagaacaggaacgggctgtactaccgctgt
cgcgtcattggcagtaccgcgcagaccttctacgaggtcaacttcgatgacggctcctac
agcgacaacctgtatccagagagcatcacgagcagagactgcttgcggctggggccgcct
cctgagggcgagctggtggagctgcggtggacagacggcaacctgtatagagccaggttc
atctccgcggccaccagcctcatctaccaggtggagtttgaggacgggtctcagctgacg
gtgaagcgtggggacatcttcaccctagaagaggagctgcccaagagggtgcggtcccgg
ctgtcgctgagcactggcacaccacaggagcctagcttctctggagaggatgtgaaggct
gctaagcgcccacgggtggccaccatgctggccaccaccacggaggacacagggcacagc
ccagaatacctggccttcgtggagagcctgctgcaggcccagggccgacctggggcaccc
ttctag

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