Peromyscus maniculatus bairdii (prairie deer mouse): 102907210
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Entry
102907210 CDS
T11302
Symbol
Srcap
Name
(RefSeq) helicase SRCAP isoform X3
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102907210 (Srcap)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmav03036
]
102907210 (Srcap)
Chromosome and associated proteins [BR:
pmav03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
102907210 (Srcap)
SWR1 complex
102907210 (Srcap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
102907210
NCBI-ProteinID:
XP_006977107
LinkDB
All DBs
Position
1:137920699..137973577
Genome browser
AA seq
3174 aa
AA seq
DB search
MQSSPSPAHSQLPILQTQMVSDGMTGSNPVSPASSSSPASSGAGGISPQHIAQDSSLDGP
PGPPDGTTVPLEGLSLSQAADLVNKGPKWEKSHAEIAEQAKHEAEIETRIAELRKEGFWS
LKRLPKVPEPPRPKGHWDYLCEEMQWLSADFAQERRWKRGVARKVVRMVIRHHEEQRQKE
ERARREEQAKLRRIASTMAKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQT
EKYSDLLSQSLNQPIASSKAASSPCLGSSSAASSPPPPVSRLDDEDGDFQPQEEEEDDEE
TIEVEEQQEGNDAETQRREIELLRHEGELPLEELLRSLPPQLLGGPSSPSQTPSSQDSDT
NDGPEENVDEEPSQDLEVNPPPSSVTQCNQQRWHPDEDDEEFTANEDEAEDEEDTIAAEE
QLEGEVDHAMELSELAREGELSMEELLQQYAGAYAYDTSAPGSGNSEEEEEVEANSYDCE
LEETREVEEAAQEDSSSQSDSAEEQSEDEEDEQSEEEEMSGSSRSEESESDESEDARSQS
QADEEQEDEGDDDDDDDDDFGVEYLLARDEERSEADGGSGPPTPGPTTTLGPKKEITDIA
AAAESLQPKGYTLATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLG
KTIQTISLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLK
RQGWTKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQ
RRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKR
LHKVLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFM
SVINILMQLRKVCNHPNLFDPRPVTSPFITPGICFSTASLVLRATDVHPLQRIDMGRFDL
IGLEGRVSRYEADTFLPRHRLSRRILLEVATAPDPPPRPKPVKMKVNRMLQPVPKQEGRT
VVVVNSPRAPLGPVPVRPPPGPEVLAQPTIGPVPPVLPAPLMVSASPAGTPVVPASRPPG
PVLLSPLQPNTGSLPQVLPSPMGVMSGTSRPPTPTLSLKPAPPAPVRLSPAPPPGSSSLL
KPLTVPPGYTFSPVAATTTSTTIATVTTTAVPAPNSTPQRLILSPEMQARLPSGEVVSIG
QLASLAQRPVASAGGSKPLTFQIQGNKLTLTGAQVRQLAVGQPRPLQMPSSMVNNTGVVK
IVVRQAPRDGLTPVPPLAPAPRPSSSGLPAVLTSRPTLTPSRLTTPTLGTTRAPIPTPTL
VRPLLKLVHSPSPEVSASAPGAAPMTISSSLHMPSSLPGPASSPMTVHNSSPLASPVSST
VSVPVSSSLPISVPTTLSAPGSAPLTIPITAPLPVSDLGPALLTSVAPALAVVSAGSGPP
LASAGVSPSVSALALGLATTPALSPPQTSGHSLLLATTSSHVPGLNSAVAPACSPVLLPA
SALTSPFPVSPSSAPAQASLLAPAPSTSQALSTSLTPMAASQTAILGPSPTSPLAPLSVL
APSPGSVPLLAPSQTPIPSVTPPSMPGTPLPSSSLVSASTPVLAPSSTQTMVSTPASSAL
SSLASSQTLTLTPALATLGGLSPSQTHSLGTGSPQGPFPTQTLSLTPTPAQTLSLAPGVP
LGPTQTLSLAPAPPLAPSSPVGPTPAHTLTLAPASSSASLLVPTSVQTLTLSPAPVPVPA
LGPSATQTLALAPALTQAPASQASSLVVSASGAASLPATMVNRLSVPKDEPETLTLRSGP
PSPTPTATSFSGPRPRRQPPPPPRSPFYLDSLEEKRKQQRSERLERIFQLSEAHGALAPV
YGTEVLDFCTLPQPVASPISPRSPGPSHPIFWTYTEAAHQAVLFPQQRLDQLSEIIERFI
FVMPPVEAPPPSLHACHPPPWMAPHQAAFQEQLACELWPRARPLHRIVCNMRTQFPDLRL
IQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQ
RQALMERFNADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQ
TRDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTIRELFDMPLEEP
PGSSASSVPEEEEEAVASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNENDVF
PAGEGEEASRPGAEEEEMSRAEQEIAALVEQLTPIERYAMKFLEASLEEVSREELKQAEE
QVEAARKDLDQAKEEVFRLPQEEEEGSGAGDEMSCGTSGGSHRRSKKVKAPERLGTRVSE
RLRGARAETQGANHTPVTSTHPTCNTFMPPQCSPVRERIPRPVPRPRHAPAPAPAPTPPP
APAPAVTSALPAAPIPISAPNPVAILPVHILPTPAPLLQLPPSCSSPTCISPSACTPPPT
CTPSPAPTSHSTASSPTPLDSLPVPVSPGVTNLPLNSEVELCARELVPVASLELPGMTNS
EASLVSPGPPKDLLPGSVDILPESEKNLLTPAPSSTLEADNIPNGQDQEVPGPEEGTSPT
LLPGGEGLTTSLSESNGLELPPSAASDEPLQEVLEAHRNLEEMGEVQIPISNPEKPQELV
SAEVTAPSTSPSATSSPEGPSPARPPRRRTSADVEIRGQGSGRAGQPPGPKVLRKLPGRL
VTVVEEKELVRRRRHRGTASTLVPGVSEAHTSPGSPSTHSMSGPESSPPSSAPCEAAPSS
SLSTPTQHPFIACRHVELGVAGGGSPENGEEAELTITPPAVKRRRGRPPKKNRSPADAGR
GVDETPSSISKGKTNGVDPVPGPETVTVAEPALRPQFVPGLAQPLGPEPVHRPEPILSPV
EKRRRGRPPKARDLPIPGTISSPGDGNLESRTQPLPLPAPLTPLPPLVACPTAVANTVTT
VTISTSPPKRKRGRPPKNPPSPRPSLGPVLDTDSPSVLESCGLGVRRQPLGQAESEGSSS
DEDGSRPLTRLARLRLEAEGIRGRKSEGSMVMAVIQDDLDLADSGPSGLELTPPVVSLTP
KFRSTRLRPGSLVPPLETEKMPRKRSGAPVGSSGMAKRGRLQPPSPLGPEGSVEESEAEA
SGDEEEGDGTPRRRTGPRRLVGTTNQGDQRILRSSAPPHLSVPTVSHRGRKAKT
NT seq
9525 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcagcccctcccctgctcactctcagctcccaatcctacagacacagatggtg
tcggacggcatgacagggagcaatcctgtatcccctgcctcatctagttctccagcttct
agtggggcaggtggtatctccccgcaacatatagcccaagattcctctctggatggacct
ccaggcccgccagatggtaccacagttcctctggaggggctcagcttatcccaagctgcc
gacctggtcaacaagggcccaaagtgggagaagagccatgcagaaattgcagaacaagct
aaacatgaagctgaaattgaaactcgaattgctgaacttcgaaaggagggattctggtca
ttgaaaaggctacctaaagtgccagagcctccccgtcctaaaggccattgggactatcta
tgtgaagagatgcagtggctctcggctgactttgctcaggagcgccgatggaaacgaggt
gtggcccggaaggtggtacgtatggtaatccggcaccatgaagagcagcgacaaaaagag
gagcgagctcggagagaagaacaggccaagctgcgccgaattgcttctaccatggccaag
gatgtcaggcagttctggagcaatgtggagaaggtggtacaattcaaacaacagtcccgg
cttgaagaaaaacgtaagaaagccttggacctgcacctggacttcattgtgggacaaact
gagaagtattcagaccttctgtctcagagccttaaccagccgatagcgtccagcaaagct
gcctcgtccccttgtctcgggtcttcctcagcagcatccagtcctccaccccctgtttct
cggctggatgatgaagatggggacttccaaccccaagaggaagaagaggatgatgaggag
accattgaggttgaagaacagcaggaaggcaatgatgcagagacccagaggcgtgagatt
gaactgcttcgccatgagggagagctgccactggaagagctgctccgttccctgccccct
cagctcttgggtggaccttccagcccctctcagacaccctcgtctcaggacagcgatacc
aacgatgggcccgaagaaaatgttgacgaggaaccgtctcaggatttggaggtaaaccct
ccaccttcctctgtaacacagtgcaaccaacaacgttggcatcctgatgaagatgatgaa
gagtttactgctaatgaagatgaagcagaggatgaagaggacaccatagcggctgaggag
cagttagagggagaggtggaccatgccatggaactgagcgagttagctcgagaaggtgag
ctttctatggaggagctactgcaacaatacgctggggcctatgcctatgatacctctgct
ccaggctctgggaacagcgaagaggaagaggaagtggaagccaatagttatgactgtgaa
ctagaggaaacaagagaagttgaagaggcagctcaagaagatagtagcagtcagtcagat
tctgctgaagagcagagtgaggatgaggaagatgaacagtcggaggaggaagaaatgagt
ggaagttcacggtcagaagaatctgagtctgatgaatctgaggatgctcggtcacaaagc
caagcagatgaagaacaggaggatgagggagatgatgatgacgatgatgatgatgatttt
ggggtggaatacttgcttgctcgagatgaggaaaggagtgaggcagatgggggcagtggg
cctccgaccccaggtcccaccaccactctagggcccaagaaagaaattactgatattgct
gcggcagctgaaagtctccagcccaagggttatactttggccactacccaggtgaagaca
cctattccacttcttctgcggggccagctccgagagtaccaacacattggccttgactgg
ctggttactatgtatgagaaaaagcttaatggcattcttgcagatgagatgggactgggg
aagacaatccagaccatctccttgcttgctcacttggcctgtgagaaaggtaactggggt
cctcatttaatcattgttcctaccagcgtgatgttgaactgggagatggaattgaaacgt
tggtgtcccagctttaaaatcctcacttactatggagctcagaaagagaggaagctcaag
cggcagggctggaccaagcccaatgctttccatgtgtgtatcacatcttacaagctggtg
ctacaggatcaccaggcttttcgtcgcaagaactggcgctatctcattctggatgaggct
cagaatatcaagaatttcaagtcccaacggtggcagtcactgctcaacttcaacagccag
aggcgcctgctcctgacaggaactcccttgcaaaatagcctcatggagctgtggtccttg
atgcattttttaatgccacatgtcttccagtctcatcgagagttcaaggaatggttctcg
aaccctctaactggcatgattgagggaagccaagaatataatgaaggtctggtcaaacgc
cttcacaaggttctgcgaccttttttgcttcgccgagttaaggtggatgttgagaagcag
atgcccaaaaagtatgagcatgttattcgatgccggctttccaagcgccaacgctgtctc
tatgatgacttcatggcccagaccacaactaaggagacactagctacaggccatttcatg
agtgtcatcaacattttgatgcagttgcggaaagtctgcaatcatccaaatctatttgac
cctcgacctgttacctcccctttcatcaccccaggcatctgctttagcaccgcctctctg
gtgctaagggccactgatgtccacccactccagcgcattgacatgggtcggtttgatctt
attggcctggagggtagagtctctcgatatgaggctgacacatttctaccccgccaccgt
ctttcccgccgcattctgttagaagtagctactgctcctgatcccccacctcgacccaag
ccagtcaagatgaaagtcaacaggatgctgcagccagtgcccaagcaagaaggccgtaca
gtggtggtggtgaacagcccacgggcaccccttggccctgtcccagtccgcccccctcca
ggccctgaggtcttagcccagcccaccattggtccagtccccccagtgctgccagcacca
ctcatggtgtcagcttcgcctgccggaaccccagttgttcctgcttcccggccgcctgga
cctgttctcttgtctcccttgcagccaaatactggttctctcccccaggtgttgccatcc
cccatgggagtcatgagtgggacctcacggcctcccacaccaaccctgtcactgaagcca
gccccacctgccccagttcgcctgagcccagctccacctccaggctcctctagcctgttg
aagcccctcacagtgcctccaggctacactttctctcctgttgctgctaccaccacttcc
accaccatagcaactgttaccactacagcagtgccagctccgaattctacaccacaacgc
ctcatcttatctcctgaaatgcaggctcgtctgccctctggagaagtggtcagcatcggg
cagttggcctccttggcacaacgtccagtggcgagtgcagggggaagcaaacctctcacc
ttccaaatccagggcaacaaactgactttgactggtgcccaggtgcgccagctggctgtg
gggcagccccgcccgctgcaaatgccgtcatccatggtgaacaatacaggcgtggtgaag
attgtagtaagacaagcccctcgggatggactgacacctgtcccaccactggcaccggca
cctcgaccttcaagttctgggcttccagctgtgttgacgtcacgccccacattaacccct
agccgtctgaccacacccactctgggtactactcgtgcccctataccaacacccactcta
gtgaggcccctcctcaagctggtccacagtccttcgcctgaagtcagtgcatcggcacct
ggagctgctcccatgaccatttcttcttctctgcacatgccatcctcactccctgggcca
gcctcttctcccatgacagttcacaattcctctccccttgctagtcctgtgtcctctaca
gtctcagtccctgtgtcatcctcacttcccatctcggtccctaccacactgtctgcccca
ggctctgctccactgaccatccccatcacagcacccttgcctgtttcagatttaggtcca
gctctgttgaccagtgtggctccagcactggctgtcgtctcagcaggctctggaccacct
ttggcgtcagctggggtttccccgtcagtgtcagccttggctctgggtttggccactact
ccagccctgtccccacctcagacatctggtcactctctgttgctggctaccacctcttca
catgttccaggattgaactcagctgtggccccagcatgctcacctgtcctgctgccagct
tcagctctaaccagtcctttcccagtatcaccaagttcagctccagctcaggcttccctt
ctggctccagcaccttctacatctcaggctttatccacctctctgactcctatggcggct
tcacagacagcaatcctgggcccttctccaacttctcctctggctccactgtcagttctg
gctccgtcaccaggctctgtccctcttctggctccatcacagactccgattccatctgta
acaccaccatcaatgccaggaactcctttaccctcatcatcactggtatcagcttcaact
cctgtgttggctccttcatcaactcagactatggtgtcaaccccagcttcatcagctctc
tcaagcctggcttcttctcagacattgaccctaaccccagctttagcaactcttggtgga
ttgtctccatctcagacacattctttgggaacagggagtcctcagggcccctttccaact
cagacgttgtcattgactccaacgccagcacagacactgtctttagcaccaggagtacca
ctgggtccaactcaaacactgtctctggctccagcaccccctttggctccaagttctcca
gtaggcccaactccagctcacacactgactttggctcctgcatcatcatctgcttcactc
ctggtcccaacttcggtgcaaacactgaccttgagccctgccccagttcctgtgcccgct
ctgggtccatctgccacccagacgttagccctggccccagccttaacacaggccccagct
tcccaggcgtcttccctcgtcgtttcggcatctggtgccgcttccttgcctgccaccatg
gtcaaccggctgtctgttcccaaggatgagcctgagacactgactttgcgatctggtcct
cccagccccactcccactgctacctcgttcagtgggccccggcctcgacgccagccccca
ccaccacctcgttcccctttctatctggattctctggaagaaaagcggaagcagcagcga
tctgaacgcctggaacggattttccaacttagtgaggctcatggggccctggcacccgtg
tatgggactgaagtcctggatttctgtactttgccccaacctgttgccagccccatcagc
cctcgttctcctggccccagccaccccatcttttggacttacaccgaggctgcccatcag
gctgtactgtttccccagcagcgactagaccagctatcagaaatcattgagaggttcatc
tttgtcatgcctcctgtggaggcacctcccccttccctgcatgcctgccacccacctcct
tggatggcccctcaccaggcagccttccaggagcagttggcctgtgagctctggccccga
gcccgtcctttgcaccgtattgtatgtaatatgcgtacccagttccctgacttgagactc
atccagtatgattgtggaaagttgcaaacattggcagtgttgttgcggcagctcaaggca
gagggccaccgggtgctcattttcacccagatgacccgaatgctggatgtgttggagcag
tttctcacctaccatggtcacctatatttgcgcctggatgggtctactagagttgagcag
agacaggccttgatggaacggttcaatgcagacaaacgcatattctgcttcatcctttca
actcgaagtgggggtgtgggtgtgaacctgacaggagcagacactgttgttttttatgac
agcgactggaatcccaccatggatgctcaggcccaggatcgctgtcatcgaattggtcag
actcgggatgtccacatctataggcttatcagtgaacgaacagtagaggagaacattcta
aaaaaggcaaatcagaagagaatgttgggagacatggccatcgagggaggcaacttcact
acagcctattttaaacagcagaccatccgagagctgtttgatatgcctctggaggagccg
cccggctcctctgcatcttctgtccctgaagaggaagaggaggctgtggccagcaagcag
actcatattttggagcaggcattgtgccgggcagaagatgaagaagatatccgtgcagcc
acccaggccaaagccgaacaagtggctgagcttgcagaatttaatgagaacgatgtgttt
cctgctggtgagggagaggaggccagtcgacctggggctgaggaggaggagatgtccagg
gctgaacaggaaattgctgctcttgtagaacagctgactcccattgagcgctatgccatg
aagttcctagaggcttcactggaggaagtaagccgagaggagctcaagcaggcagaagag
caagtggaagctgcccgaaaagacctggatcaagccaaggaggaggtgtttcgactgccc
caagaggaagaggaagggtcaggggctggggatgagatgtcttgtgggactagtggaggc
agccaccggcgcagtaagaaagtcaaggctcctgagaggctggggactcgtgtcagtgag
cgtcttcgtggagctcgagctgagactcaaggagccaaccacactcctgtcacatctacc
catcctacctgcaacaccttcatgcctccccagtgcagccctgtgagagaacgaattccc
aggccagtgcctaggcctcgacatgctcctgctcctgctcctgctcccactccacctccc
gctcccgctcccgctgtaacttctgccctacccgcagctcccatacccatttcagcccca
aatccagtagccattcttcctgtccatatcttgcctactcctgcacctctgcttcagctc
cctccgtcttgttcttctcctacttgcatctctccttctgcctgtacccctccacccact
tgtaccccctcacccgctccaacctctcattcgaccgcttcttcaccaaccccacttgat
tccctccctgtgcccgtctctcccggggttaccaaccttcctttgaactcagaagtagag
ctgtgtgcacgagagttggtacctgtggcgtctctagagctgcctggaatgaccaattct
gaggcttccctggttagtcctgggcctccaaaggatcttttgccagggtctgttgatatt
ctgcctgagtcagagaagaatcttctaactcctgcacccagttcaaccctggaggctgac
aacatccccaatggtcaggatcaggaggtgccaggtcctgaggaagggactagtcccaca
ctgctccctggtggtgaggggttgaccacgagtctgagtgagagcaatgggctggagctc
ccaccctcggcagcatcggatgagccacttcaggaggtgttggaggctcacaggaacttg
gaagaaatgggagaggttcagatcccaatctccaacccagaaaagccacaagaacttgtt
agtgccgaggttacagccccatccacctcaccttcagccacctcctctcctgagggtcct
tcacctgcccgtcccccacggcgtcgtaccagtgctgatgtggaaatcaggggtcagggg
tctggccgggcaggacaacccccaggtcccaaagtgcttcgaaagctgccaggacggctg
gtaactgtggtggaagaaaaagaacttgtgagacgtcggcgacatcggggaactgccagc
accctagtacccggggtatccgaagctcacaccagtccaggaagcccatccacccacagc
atgtcagggccagagtcctcacctcccagcagtgcgccctgtgaagctgctccgtcatcc
tcactgtccaccccaacccagcatcccttcatagcttgtcgtcatgttgaactgggtgtg
gctggtgggggcagcccagagaatggagaagaagcagagcttaccatcactccacctgct
gtgaaacgtcggaggggaaggccccccaagaagaacaggtctccagcagatgctgggaga
ggggtggatgagaccccttcatccatctctaaggggaaaaccaatggggttgacccagtc
cctgggcctgagacggtaactgttgcagagcctgccctcaggccccagtttgttcctggg
ctggcccagcctctcggacctgaaccagttcacagaccagagcccatcctgtcacctgtg
gaaaaaagacgacgtgggcgtccccctaaagcaagggatttgcccattcctgggaccata
tcctctccaggggatggcaacttagagagccggacacagccactccccctcccagcaccc
ctgacaccactcccaccacttgtagcctgtcccactgctgtcgccaacactgtcaccact
gtcactatttcaacctccccacctaagcggaagcgaggccgacctcccaagaatccacca
tcacctcggcccagccttggccctgtcttggacaccgacagcccttctgtccttgagagt
tgtggattgggggtgcggcggcaacccctgggccaggcggaaagtgaaggcagttcctct
gatgaggatggaagccgccctctcacccgcctggcccgtctacggcttgaagcagagggc
attcggggacgaaagagtgaagggtccatggtgatggccgtaattcaggatgacctggat
ttagcagatagtgggccgagtgggttagaactgacaccacctgtggtctcattaactccc
aagtttcggtcaacccgcctgcgtccagggtctctagttcccccactagaaactgaaaaa
atgcctcgcaaaaggtcaggggctccagttgggagttctgggatggcaaagaggggccgc
ttgcagcccccaagtcccctggggcctgagggttcagtagaggagtcagaggcagaagcc
tcaggtgacgaggaggaaggagatggaaccccacgccgccgaaccggtccccgcaggctc
gttgggaccaccaaccaaggggaccagcgtatcctgcgtagtagtgctcctccccaccta
tctgtccctactgttagtcacagaggtcgcaaggccaagacgtga
DBGET
integrated database retrieval system
