Peromyscus maniculatus bairdii (prairie deer mouse): 102907694
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Entry
102907694 CDS
T11302
Symbol
Rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
102907694 (Rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmav04131
]
102907694 (Rabgef1)
Membrane trafficking [BR:
pmav04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
102907694 (Rabgef1)
Protein recycling
Other Rab GTPase associated proteins
102907694 (Rabgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
CID_GANP
SSTK-IP
Motif
Other DBs
NCBI-GeneID:
102907694
NCBI-ProteinID:
XP_042124553
Ensembl:
ENSPEMG00000013007
LinkDB
All DBs
Position
23:21770080..21822081
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AA seq
492 aa
AA seq
DB search
MSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAER
LQREEEEAFASSQSSQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFSASSRVGSKKAEIQE
AKAPSPSINRQTSIETDRVTKEFIDFLKTFHKTGQEIYKQTKMFLEAMHYKRDLSIEEQS
ECTQDFYQNVAERMQTRGKVPPEKVEKIMDQIEKHIMTRLYKFVFCPETTDDEKKDLAIQ
KRIRALHWVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITRCSKHIF
NAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNL
CCAVAFIEKLDAQSLNLSQEDFDRYMSGQTSPRKQESESWSPEACLGVKQMYKNLDLLSQ
LNERQERIMNEAKKLEKDLIDWTDGIAKEVQDIVEKYPLEIKPPNQPLAAIDSENVENDK
LPPPLQPQVYAG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgaagtccgaacgccggggaattcatgtggatcaatctgagctcctgtgcaag
aaaggatgcggttactacggcaaccctgcctggcagggtttctgctccaagtgctggagg
gaggagtaccacaaggcccggcagaagcagatccaagaggactgggaactggcagaaaga
cttcagcgggaggaggaagaggccttcgctagcagccagagcagccagggagctcagtcc
ctcacattctccaagttcgaggaaaagaaaaccaatgagaagacccgcaaggtcaccacg
gtgaagaagttcttcagtgcctcttccagggttggatccaagaaggcagaaattcaggaa
gccaaagctcccagtccctccataaaccggcaaaccagcattgagacggatcgagtgact
aaagagttcatagactttctcaagaccttccacaagacaggccaagaaatctataaacag
acgaagatgtttttggaagcaatgcattacaaaagggatttgagcattgaggagcagtca
gaatgtactcaggacttttaccagaatgtggccgaaagaatgcagactcgtgggaaagtg
cctccagagaaagtggagaagataatggatcagattgagaagcacatcatgacccgtctc
tataaatttgtgttctgccctgagactactgatgatgagaagaaagatcttgccattcaa
aagaggatcagggctctgcactgggtgacacctcagatgctctgtgtccccgtcaatgag
gaaatcccagaagtgtctgacatggtggtgaaagcgatcacagacatcattgagatggac
tcaaagcgtgtgcctcgggacaagctagcctgcatcaccaggtgcagcaaacacatcttc
aacgccatcaagatcaccaagaatgagccagcctctgccgacgacttcttgcccaccctc
atttacatcgtcctgaagggcaacccccctcgcctgcagtccaacatccagtacatcact
cgcttctgcaaccccagcaggcttatgacgggcgaagatggctactacttcaccaacctg
tgctgcgctgtggctttcattgagaaattggatgctcagtcattgaatttaagtcaggag
gattttgaccgatacatgtccggccagacttccccaaggaagcaggagtctgagagttgg
tcccccgaagcctgcttaggtgtgaagcaaatgtataagaacttggacctcctgtctcag
ttgaatgagcggcaggaaaggatcatgaatgaagccaagaaacttgaaaaagacttaata
gactggacagacggaattgccaaggaagttcaagacattgttgagaaatacccacttgag
attaagcccccaaaccaacccttagcagccattgactctgaaaacgtggagaacgacaag
ctcccgcccccactgcagccgcaggtgtacgcagggtga
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