Peromyscus maniculatus bairdii (prairie deer mouse): 102907759
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Entry
102907759 CDS
T11302
Symbol
Prpf39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmav03041
]
102907759 (Prpf39)
Spliceosome [BR:
pmav03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102907759 (Prpf39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
102907759
NCBI-ProteinID:
XP_006986991
Ensembl:
ENSPEMG00000002480
UniProt:
A0A6I9LR55
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All DBs
Position
14:complement(6026687..6052723)
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AA seq
664 aa
AA seq
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MQNSHMDEYRNSDNGSTGNSSEVVVEHPDFSTEIMNVTEMEQSPDGSPSVNASTEENEMA
SAADLPVTETEGNFPPEFEKFWKTVETNPQDFTGWVYLLQYIEQENHLMAARKAFDKFFI
HYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPGDPE
TNNTIRGTFEHAVLAAGTDFRSDKLWEMYINWENEQGNLREVTAVYDRILGIPTQLYSHH
FQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAKLI
TEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEFE
IENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTVHLPKKPMA
HMLWAAFEEQQGNINEARTILRTFEECVLGLAMVRLRRVSLERRHGNMDEAEHLLQDAIK
NAKSNNESSFYAIKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSCDLK
QNEESILNCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQDS
LKRKAENGSEEPEEKKAHTEDMSSAQIIDGDLQANQAAYNYSAWYQYNYQNPWNYGQYYP
PPPT
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattctcacatggatgagtacagaaactctgataatggcagcacaggcaacagc
tcagaggtagtggtagaacatccagattttagtactgagatcatgaatgttacggagatg
gaacagtcacctgatggctctcccagcgtgaatgcatccacagaagaaaatgaaatggca
agtgctgcggaccttccagtgacagaaacagaaggaaacttccctccagaatttgagaaa
ttttggaaaacagtagaaactaatcctcaggattttacaggctgggtatatttgcttcag
tacatagaacaggagaatcacttgatggctgccaggaaagcatttgacaaatttttcata
cactacccgtattgctatggttactggaaaaagtatgcagaccttgaaaagcgacatgac
aacattaaacaatcagatgaggtttatcgacgggggcttcaggcaatacctcttagtgtt
gacctttggatacattatataaacttcttaaaagaaacattggaccctggtgatcctgag
acgaacaatacaataagaggaacttttgagcatgctgttctagctgcaggaacagatttt
cgatctgacaaactatgggaaatgtatataaactgggaaaatgaacagggaaatctgaga
gaagttacagctgtgtatgatcggattcttggtattccaacacagctgtacagtcatcat
tttcagagatttaaagaacatgtacagaataacttgcctagagatcttttaactggtgaa
cagttcattcagttgagaagggaattagcttctgtaaatggacacagtggtgatgatgga
cctcctggtgatgaccttccatcaggaattgaagacataactgacccagcaaagctaatt
actgaaatagaaaacatgagacatagaatcattgaaattcatcaagaaatgtttaattat
aatgagcatgaagttagtaagaggtggacatttgaagaaggtattaaaagaccttatttt
catgtgaaacctttggaaaaggcccaactaaaaaactggaaagaatacttagaattcgaa
attgaaaatgggactcatgaaagagttgtggttctctttgaaagatgtgtcatatcttgt
gccctctatgaggagttttggattaagtatgccaagtacatggaaaaccatagcattgaa
ggagtaaggcatgtcttcagcagagcttgtactgttcatcttccaaagaaacccatggca
catatgctttgggcagcttttgaggaacagcaggggaacattaacgaagccaggactatc
ttgagaacgtttgaagaatgtgttctaggactggcaatggttcgattgagaagagtaagt
ttagaacgacggcatggaaatatggacgaagctgaacatttgcttcaagatgctataaag
aatgccaagtcaaataacgagtcatcattttatgctattaaactagcccggcatcttttc
aaaatacaaaaaaatcttccaaaatcaagaaaggtacttttggaagcaatcgaaagagat
aaggagaacacaaagttatacctcaatttacttgaaatggaatacagttgtgatctcaaa
caaaatgaagaaagtatcctcaattgctttgacaaggccattcatggttcattgcctatt
aaaatgagaattacattttctcagagaaaagtggaattccttgaagattttggttcagat
gttaataagcttctgaatgcatatgatgaacatcaaacactcctaaaggaacaggattcc
ttaaaaaggaaagctgaaaatggttcagaagaaccagaagaaaagaaagcacacacagaa
gatatgtcatcagcacaaatcattgatggggatttacaggcaaatcaagctgcatataat
tacagtgcctggtatcagtataattatcagaatccttggaattatggacagtattatcct
ccacctccaacctga
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