Peromyscus maniculatus bairdii (prairie deer mouse): 102907939
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Entry
102907939 CDS
T11302
Symbol
Prdm13
Name
(RefSeq) LOW QUALITY PROTEIN: PR domain zinc finger protein 13
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmav03000
]
102907939 (Prdm13)
Transcription factors [BR:
pmav03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
102907939 (Prdm13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_7th_ZNF462
zf_MP81
zf-BED
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
102907939
NCBI-ProteinID:
XP_006979327
Ensembl:
ENSPEMG00000000098
LinkDB
All DBs
Position
2:complement(47621063..47629127)
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AA seq
746 aa
AA seq
DB search
MPARVTPRAEDARRGAASSSHXGCSWFCHSLLAEDPESSSACLAAVATMQGTSRTPATSV
NADCCIPAGLRLGPVPGTFKLGKYLSDRREPGPKKKVRMVRGELVDESGGSPLEWIGLIR
AARNPQEQTLEAIADLPGGQIFYRALRDVQPGEELTVWYSNSLAQWFDIPTTATPTHDEK
GEERYICWYCWRTFRYPNSLKAHLRFHCVLSGGGGRAFLHQEHAARPGPAAEGFGLPPKP
IAPDLTAPVQQGALRPQAQATQLAQACGARESIKREVSLAPPATSASPGKWGTPRKGKEP
PDRALDAGGATRAHSHFLGIVGGSPAAGSGLAFYPGVRSAFKPAGLTRAAAQGDPYREEG
GSKGPGLALGRLLGGGRAGGRPSSGESPAGHHHHHHHAHHHHHHPKCLLAGEPPPPGLAC
PGALRAFPLLAGHTEEVSAFKHVERAPPAAGALPAARYAALPAPGLPLERCALPPLDAAG
GLKGYSSGECSPLPAVMPAFTVYSGDLLYGPPAAYYPLKLHLGGLLKYPESISYLSGPAA
AAAAAAAAAIGPAELGSLASIDREIAMHTQQLSEMAAGKGRARLDSGTLPPAVVAAAGSG
GGGAAGKPKTGHLCLYCGKLYSRKYGLKIHMRTHTGYKPLKCKVCLRPFGDPSNLNKHIR
LHAEGNTPYRCEFCGKVLVRRRDLERHVKSRHPGQSLIAKAGDGPGAEPGYALEPGDPKS
EDSDVDVCFTDDQSDPEAGGRGERDS
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccgcgtcactccgcgggcagaagacgcacgtcggggtgcggcttcttcatcg
catngaggctgctcctggttctgtcactcgctcctcgcggaggaccccgagagctccagc
gcctgcctagcggcagtggcaacaatgcaaggaacttcccgcactccggccaccagcgtg
aatgctgactgctgcatcccggctggcttgcgcctggggcccgtgcctggcaccttcaag
ctgggcaagtacctgtcagatcgcagggaaccagggcccaagaaaaaggtgcgcatggtg
agaggggagctggtggacgagtcagggggctcccctctggagtggatagggttaatccgg
gcagccaggaacccccaggaacagaccctggaagctattgcagacttaccaggaggacag
atcttctatcgagcattgcgagatgtccagcccggggaagagctgactgtatggtattct
aattccttggctcagtggtttgacatccctacaactgctactccaactcatgatgaaaaa
ggggaggagcgctacatctgctggtactgctggaggacatttagataccctaacagtctc
aaggcacacctgcgtttccactgcgtgctcagcggaggcgggggccgcgccttcctgcat
caggagcacgcggccaggccaggcccagcggcagaaggctttggcctccctccgaaaccc
attgctccagacttgaccgcgccagtccagcaaggcgctttgcggccccaggcacaggcc
actcaactcgcccaggcctgtggggcgcgggagagcatcaagcgcgaggtttccttggcg
cccccggccacttcagcgtccccgggcaagtgggggactcccagaaaaggcaaggagcca
ccagatcgcgccctggacgccggcggggcgacccgcgcacacagtcacttcctgggcatc
gtgggcggctccccagccgctggcagcggcctggcattctaccccggcgtgcgctcggct
ttcaaaccggctggcctgacgcgggcagccgcgcagggcgacccctaccgggaagagggc
ggcagcaagggacccggcctggcattaggccggcttctgggtgggggccgggccggcggg
cgtcccagcagtggggagagcccggctggccaccaccatcaccaccaccacgctcaccac
caccaccaccaccccaagtgcctgctcgcgggggagccgccgccacccggcttggcgtgt
cccggggccctgcgcgccttccccctgctcgcaggccacacggaggaggtgtcggccttc
aagcacgtggagcgcgccccacccgccgctggggcgctgcccgcggcgcgctatgcagct
ctcccagcacccgggctccccctggagcggtgcgcgctgccgcccctcgacgccgccgga
gggctcaaaggctactccagcggcgagtgcagcccgctgcccgccgtcatgccagccttc
acggtgtacagcggagacctgctctacggtccccctgccgcctattacccgctcaagctg
cacttgggcgggctgctcaaatacccggagtccatctcctatttgagcgggcccgcggcg
gctgcggcggccgcggcggctgcggcgatcggcccggccgagctgggctccctggccagc
atcgaccgcgagatcgccatgcacacgcagcagctgtccgagatggcggccgggaagggt
cgtgcccgcttggactccgggacgctgcctccggccgtagtggcggcagcaggcagcggc
ggcgggggcgcagcaggcaaacccaagaccggccacttgtgcctctactgcggcaagctg
tactcgcgcaagtatgggctcaagatccacatgcggacgcacaccggctacaagccgctc
aagtgcaaagtgtgcttgcggcccttcggggaccccagcaatctcaacaagcacattcga
ctgcacgcggagggcaacacgccctatcgctgcgagttctgcggcaaggtgctggtgcgc
cgccgggacctggagcgtcacgtcaagtcccgccaccccggccagagcctgatcgccaag
gcgggtgacggcccgggcgcggagccaggctatgccctggagcctggggatcccaagagc
gaggacagtgatgtggacgtctgcttcacggacgaccagagcgacccggaggctgggggt
cgaggcgagcgcgactcctaa
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