Peromyscus maniculatus bairdii (prairie deer mouse): 102907995
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Entry
102907995 CDS
T11302
Symbol
Rfx1
Name
(RefSeq) MHC class II regulatory factor RFX1 isoform X5
KO
K09173
regulatory factor X 1/2/3
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmav03000
]
102907995 (Rfx1)
Transcription factors [BR:
pmav03000
]
Eukaryotic type
Other basic domains
RF-X
102907995 (Rfx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
102907995
NCBI-ProteinID:
XP_006993145
Ensembl:
ENSPEMG00000014245
UniProt:
A0A6I9M5Q8
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All DBs
Position
5:21463744..21498400
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AA seq
963 aa
AA seq
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MATQSYVTELQAAPQASQPPQAPPQALPQPPPPTAPQPPAAATPQPQYVTELQSPQPQTQ
PPGSQKQYVAELPAAPAPSQPATPAPSPVAQQYLVVTVSEGAMRASETVSEASPSSTASQ
TGVPTQVVQQVQSSQQRLLVQASVQAKPGHASPLQLTNIQVPQQAIPTQHLVVQSAAPGT
KGGQVSLTVHPAPERSPVQANNSTSKTAGAPAGTVQQLQVHSVQQSVPVSQERSVVQATP
QTKAAAVQQLTVQGLQPVHVAQEVQQLQQVPVPHVYPSQVQYVEGGDASYAASAIRSSTY
PYPETPIYTQPAGTSYYEAPGTAAQVSTPATSQTVASSGSVPMYVSGSPIVASSSSSEAG
ASNSSVGAGGSGGGGSSNGGGGGGGGGSSGGGSGAGTYVIQGGYMLGNASQSYSHTTRAS
PATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRR
LGTRGNSKYHYYGLRIKASSPLLRLMEDQQHMAMRGQPFSQKQRLKPIQKMEGVANGVAV
GQQSTGLADISAQVQQYQQFLDASRSLPDFVELDLQGKVLPEGVGPGDVKAFQVLYREHC
EAIVDVMVNLQFTLVETLWKTFWRYNLSQPNEAPPLAVHDEAEKRLPRASLVLLSKFQPV
LQWTKRCDNVLYQGLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTHAMVNIPEEMLRV
KVAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASWVCRC
EDRVVQRLEQDFKVTLQQQNSLEQWAAWLDGVVSQVLKPYQGSSGFPKAAKLFLLKWSFY
SSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMGEFANLATSL
NPLDPDKDEEEEEEEESEDELPQDISLAAGSESPALGPEALEPPAKLARADTRGLFVQAL
PSS
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacagtcctatgttactgagctacaggcagccccacaagcatcccagccgcca
caagccccaccccaggccctgccccagccaccacccccgacagcaccccagcctcctgct
gcagcgaccccccagccccagtatgtcaccgagctgcagagcccccagccccagacgcag
cctccgggcagccagaagcagtatgtggcagagcttccggctgcccccgcaccctcacag
cctgccacacctgccccctcccctgtggcccagcagtatctcgtggtcaccgtctcagaa
ggtgccatgcgggctagtgagactgtgtcagaggccagccccagttccacggcaagccaa
accggcgtccccacccaggtggtacagcaggtgcagagcagccagcagcgcctgctggtc
caggcaagcgtgcaggccaagccaggccacgcctcacccctgcagctcaccaacatccag
gtaccacagcaggctatccccacacagcacctggtggtgcagagcgcagcgccgggcacg
aagggtggccaggtctccctgacggtgcaccctgcccctgagaggtcaccagtgcaggcc
aacaactccaccagcaagacagctggcgctcctgcaggcacggtacagcaactacaggtc
cacagcgtccagcagagtgtccctgtcagccaagagaggtcggtagtccaggccactccc
cagaccaaagctgccgcggtgcagcagctgactgtgcaggggctgcagccagttcacgtt
gctcaagaggtacagcagctccagcaggtgcctgtcccacatgtgtaccccagccaggtg
cagtatgtggagggtggtgatgccagctacgcagccagtgccatccgctctagcacctac
ccctaccctgagacgcccatctacacgcaaccagcaggcaccagctactatgaggctcca
ggcaccgctgcccaggtcagcacgccggctacttcccagactgtggccagcagtggctca
gtgcccatgtatgtgtccggcagcccgattgtcgccagctcctccagcagtgaggccggg
gccagcaacagcagcgtgggggcagggggcagcgggggaggtggcagcagcaatggtggt
ggcggcggcggtggcggcggcagcagcggcggtggcagtggagcaggcacctacgtgatc
caaggcggctacatgctaggcaacgccagccagtcttattcccacaccacccgtgcctca
ccggccacagtccagtggctcctagacaattacgagaccgccgagggcgtgagcctgccg
cggagcaccctctactgccattacctgctgcactgccaggagcagaagctggagcctgtg
aacgccgcctccttcggcaagctcatccgctcagtgttcatggggctgcgcacccgccgc
ctgggcaccaggggcaactctaagtaccactactacggcctgcggatcaaagccagctca
cccctgctgcggctgatggaggatcagcagcacatggccatgcgaggccagcccttctcc
cagaaacagaggctcaagcccatccagaagatggagggcgtggccaacggtgttgccgtg
gggcagcagagcacagggctggcagacatcagcgcccaggtgcagcagtaccagcagttc
ctggatgcctccaggagtctccctgattttgttgagctggacctccagggcaaagtgctg
cctgagggcgtcggccctggggacgtcaaggccttccaggtcctgtaccgggaacactgt
gaggccattgtggacgtcatggtaaatctccagttcacactggtagaaacactgtggaag
accttctggagatataaccttagccagcccaacgaggcacctccgctggctgtgcatgac
gaggcagagaaacggctgcccagggccagtctggtgctcctctccaagttccagcccgtg
ctgcagtggaccaagcgctgtgacaatgtgctgtaccagggcctggtggagatcctcatc
cctgacgtgctgcggcccatccccagtgccttgacccaagcaatccggaactttgccaag
agcctagagagctggctcacgcacgccatggtgaacatccctgaggagatgctgcgggtg
aaggtggccgcggccggcgccttcgcacagacgctgcggcgctatacgtcactcaaccat
ttggcacaggcggcgcgagccgtgctgcagaataccgcgcagatcaaccagatgctgagc
gacctcaaccgtgtggacttcgcaaatgtgcaggagcaggcctcgtgggtgtgccgctgc
gaggaccgggtggtgcagcgtttggagcaggacttcaaggtgacgctgcagcagcagaac
tcactggagcaatgggcagcctggctggacggcgtcgtgagccaggtgctcaagccctac
cagggcagttccggcttccccaaggcggccaagctcttcctcctcaagtggtccttctac
agctccatggtcatccgggacctgaccctgcgcagcgctgccagcttcggctccttccac
ctcatccggctgctctatgacgagtacatgtactatctgatcgagcaccgcgtggcccag
gccaagggcgagaccccgatcgcagtcatgggagagtttgcaaatctggccacctcgctg
aaccccttggaccctgacaaagacgaggaggaagaagaggaggaggagagtgaggatgag
ctgccacaagacatctcgctggctgcgggcagcgagtccccggctctgggcccagaagcc
ctagaaccaccggcgaagctggcgcgggccgacactcgtggcctctttgtgcaggccctg
ccctccagctaa
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