Peromyscus maniculatus bairdii (prairie deer mouse): 102908419
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Entry
102908419 CDS
T11302
Symbol
Exosc10
Name
(RefSeq) exosome complex component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102908419 (Exosc10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmav03019
]
102908419 (Exosc10)
Messenger RNA biogenesis [BR:
pmav03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
102908419 (Exosc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
102908419
NCBI-ProteinID:
XP_006975300
UniProt:
A0A6I9L9I0
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Position
2:165484494..165511125
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AA seq
887 aa
AA seq
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MAPPSPQEPQAAPVTSATKPDEEMVLPGFPDADSFVKFALGSVVAVTKASGGLPQFGDEY
DFYRSFPAFQAFCETQGDRLLQCMSRVMQYHGCRSNIRDRSKVTELEDKFDLLVDTNDVI
LERVGILLDEASGVNKHQQPVLPAGLQVPKTIVSSWNRKAGEYGKKAKSETFRLLHAKNI
LRPQLRFREKIDNSNTPFLPKIFVKPNAQKPLPQALSKERRERPQDRPEDLDVPPALADF
IHQQRTQQVEQDMFAHPYQYELDHFTPPESVLQKPQPQLYRPVEETPCHFVSSLDQLVEL
NEKLLGCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTDPA
IVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLARHSLDHLLRLYCGVESNKQYQ
LADWRIRPLPEEMLNYARDDTHYLLYIYDRMRLELWERGNDQPVQLQVVWQRSRDICLKK
FVKPIFTDESYLELYRKQKKHLNSQQLAAFQLLFAWRDKTARREDESYGYVLPNHMMLKI
AEELPKEPQGIIACCNPVPPLVRQQINEMHLLIQQAREMPLLKSETAAGVKKSGPLPSAE
RLENDLFGPHDCSHAPPDNYPITPTDGSVPLQKQPSLFAEGKEETPLDARCLLTTAVITL
FSEPSAEESGKTPLTVAQKKAQNIMESFENPFRMFLPSLEHKAHISQAAKFDPSSKIYEI
SNRWKLASQVQVQKEPKEATLKKVAEQTGARKQAKEESEAASLEQAIPVRQQAALENATK
KRERAAGDLRTTEQKQEKKRLKSSKKPQDPDPPGKDFSPYDYSQSDFRAFAGDSTSKASP
QFDPNKPAPSGKKCVAAKKFKQSVGNKSMSFPAGKSDRGFRHNWPKR
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcccagtccccaggagcctcaggccgcgccagtgaccagcgcgaccaagcct
gacgaggagatggtgctgcctggcttccccgacgcagacagcttcgtgaaatttgccctg
gggtcagtggtagcagttaccaaagcatctggaggcctgccacaatttggtgacgagtat
gatttttatcgaagttttcctgccttccaggctttttgtgaaacacaaggagacaggttg
cttcagtgcatgagcagggtaatgcagtaccatgggtgccgcagcaacatcagagaccga
agtaaagtgaccgaattggaggacaagttcgacttactagttgataccaacgatgtgatt
ttggagagagtgggtatattactggatgaagcatcgggtgtgaataagcatcaacagcct
gtcctccctgctggactgcaggtccccaaaacaatagtgtcgagttggaaccggaaggca
ggagaatatgggaaaaaagcaaaatctgagactttccgactgctacacgcaaaaaacatc
ctccgaccccagctcagattccgagagaagattgataattctaatacaccatttctccct
aaaatctttgtcaagcccaatgctcagaagcccctccctcaggccctctcaaaagaaagg
cgggaacgtccacaggatcgtcctgaggacctggacgtcccccctgccctggcagatttc
atccatcagcagaggacccagcaggttgaacaggacatgtttgcgcatccttatcaatat
gaacttgatcactttactccacctgagtcggtgcttcagaagccgcagccccagttgtac
agacctgtggaagagacaccctgccactttgtatcctccctggaccaactcgtggagctg
aacgaaaagctcctgggttgtcaggagtttgcagtggacctagagcatcactcatacaga
agcttcctaggactgacctgcctgatgcaaatttccacccgaacagaagacttcatcgtt
gacaccctagagcttcgaagtgacatgtacattctcaatgagagcctcacagacccagcc
attgttaaggtcttccatggtgccgactctgacatcgagtggctacagaaagactttggg
ctctacgtagtgaacatgtttgacacacaccaggcagcgcggcttctcaacctggctcgt
cactcactggaccacctgctgagactctactgtggtgtggagtcaaacaagcagtaccag
ctggcagactggaggatacgccctctgccagaggagatgctaaactacgcccgggatgac
acccattacctgctgtacatctatgaccgaatgaggctggagctgtgggagagaggcaac
gaccaacctgtccagttgcaggtcgtgtggcagcggagcagggacatctgcctcaagaaa
ttcgtcaagcctatctttacggacgagtcatacctcgagctgtatcgcaagcagaagaag
catctgaactcacagcagctggcggcctttcagctgctatttgcctggagggataagaca
gctcgcagggaggatgagagctacggatatgttctacctaatcacatgatgctaaagata
gctgaggaactgcctaaggagcctcaaggcattatagcttgctgcaacccagtaccacct
ctcgttcggcagcagatcaatgagatgcatcttttaatccagcaggctcgagagatgccc
ctgctcaagtctgaaactgcagctggagtgaagaagagcggaccgctgcctagcgccgag
agattggagaatgatctctttggaccccatgactgttcccacgcccctccagataactac
ccgatcaccccaaccgatgggtctgtgccacttcagaagcagccgagcctctttgctgag
ggcaaagaagaaacccctctggatgccagatgccttcttaccacagccgtcatcactctg
ttcagtgagcctagcgctgaggaaagtggaaagactccattgacggttgcacagaaaaaa
gcccagaacataatggagtcctttgaaaacccatttaggatgttcctgccttctctggaa
cacaaggcccacatctctcaagcagcaaagtttgatccttcttcaaaaatctatgaaatc
agcaaccgctggaagctggccagccaggtccaggtccagaaagaacctaaagaagcaacc
ttgaagaaggtggccgagcagacaggcgcccggaaacaggcaaaggaggagtctgaagca
gcttcgttggagcaggccatcccagtgcggcagcaggccgcgctagaaaatgctactaag
aagagagagagagccgccggtgacctgaggaccacagaacaaaagcaggagaagaaacga
ctaaaaagctccaagaaaccccaggatcccgaccccccaggaaaagatttcagtccttac
gactacagccagtcagacttcagggcctttgctggggacagcacatccaaggcctccccc
cagtttgacccgaataagccggcgccttctggcaagaaatgtgttgcagccaaaaaattt
aaacagtcggtgggaaacaaaagtatgtcctttccagctggcaagtcagacagaggcttc
cggcacaactggccaaagagatag
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