KEGG   Peromyscus maniculatus bairdii (prairie deer mouse): 102908883
Entry
102908883         CDS       T11302                                 
Symbol
Rbm8a
Name
(RefSeq) RNA-binding protein 8A isoform X1
  KO
K12876  RNA-binding protein 8A
Organism
pmav  Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03013  Nucleocytoplasmic transport
pmav03015  mRNA surveillance pathway
pmav03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102908883 (Rbm8a)
  09122 Translation
   03013 Nucleocytoplasmic transport
    102908883 (Rbm8a)
   03015 mRNA surveillance pathway
    102908883 (Rbm8a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmav03019]
    102908883 (Rbm8a)
   03041 Spliceosome [BR:pmav03041]
    102908883 (Rbm8a)
Messenger RNA biogenesis [BR:pmav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     102908883 (Rbm8a)
Spliceosome [BR:pmav03041]
 Complex C
  Other components
   EJC/TREX
    102908883 (Rbm8a)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 102908883
NCBI-ProteinID: XP_006982647
Ensembl: ENSPEMG00000018117
LinkDB
Position
6:76619961..76622139
AA seq 174 aa
MADVLDLHEAGGEDFAMDEDGDESIHKLKEKAKKRKGRGFGSEEGSRARMREDYDSVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVE
YETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRRSRSPDRRRR
NT seq 525 nt   +upstreamnt  +downstreamnt
atggcggacgtgctggatcttcacgaggctgggggcgaggacttcgccatggatgaggat
ggggacgaaagcatccataaactaaaagagaaagcgaagaaacggaagggccgcggcttt
gggtccgaagaggggtcccgagcgcggatgcgagaggattatgacagtgtagagcaggat
ggcgacgaacctggaccgcagcgctctgttgaaggttggattctctttgtcactggagtc
catgaagaagccactgaagaagatatccatgacaaattcgctgaatatggggaaataaaa
aacatccaccttaacttggacaggcgtacaggatacttgaaggggtatactctagtggag
tatgaaacatacaaagaggcccaggctgccatggagggactcaatggtcaagatttgatg
ggacagccaatcagtgtcgactggtgttttgttcggggtccaccaaagggcaagaggaga
ggtggccgaagacgaagcagaagtccagaccggagacgtcgttga

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