Peromyscus maniculatus bairdii (prairie deer mouse): 102909425
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Entry
102909425 CDS
T11302
Symbol
Col4a3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04151
PI3K-Akt signaling pathway
pmav04382
Cornified envelope formation
pmav04510
Focal adhesion
pmav04512
ECM-receptor interaction
pmav04820
Cytoskeleton in muscle cells
pmav04926
Relaxin signaling pathway
pmav04933
AGE-RAGE signaling pathway in diabetic complications
pmav04974
Protein digestion and absorption
pmav05146
Amoebiasis
pmav05165
Human papillomavirus infection
pmav05200
Pathways in cancer
pmav05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102909425 (Col4a3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102909425 (Col4a3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102909425 (Col4a3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102909425 (Col4a3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
102909425 (Col4a3)
09154 Digestive system
04974 Protein digestion and absorption
102909425 (Col4a3)
09158 Development and regeneration
04382 Cornified envelope formation
102909425 (Col4a3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102909425 (Col4a3)
09162 Cancer: specific types
05222 Small cell lung cancer
102909425 (Col4a3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
102909425 (Col4a3)
09174 Infectious disease: parasitic
05146 Amoebiasis
102909425 (Col4a3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
102909425 (Col4a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmav04147
]
102909425 (Col4a3)
00536 Glycosaminoglycan binding proteins [BR:
pmav00536
]
102909425 (Col4a3)
Exosome [BR:
pmav04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
102909425 (Col4a3)
Glycosaminoglycan binding proteins [BR:
pmav00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102909425 (Col4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
102909425
NCBI-ProteinID:
XP_006990424
Ensembl:
ENSPEMG00000022581
UniProt:
A0A6I9MAF3
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All DBs
Position
13:complement(32349742..32478882)
Genome browser
AA seq
1671 aa
AA seq
DB search
MHAETAPRLQALLLPILLLLLATPPVVSKGCVCKGKGQCFCMGTKGEKGEKGYPGPPGFP
GQKGFPGPEGLPGPQGPKGSLGLPGLTGPKGIRGITGLPGFSGPPGLPGIPGHPGPHGLA
GLPGCNGSKGEQGFPGIPGTPGYSGLPGPPGLKGQKGEPAQGEDREFNGKGDPGPPGLPG
FQGFPGPPGFPGPAGPPGPPGVFGFPGAVGPRGPKGHMGDNAIGEKGERGVKGLTGPPGL
QGTVIVTLIRPPYNKSDFEGEKGDKGEMGEPGRPGPPGPPGDSYGSEKGVPGEPGPRGKP
GKDGAPGFPGTQGAKGNRGLPGLMGEAGIKGWKGDTGPPGFPGPTEYYDAYLEKGDKGMP
GPPGPKGARGPQGPSGPPGVPGSPGLSRPGLRGPPGWPGQKGRKGERGPPGKDTMGPPGP
LGCPGFPGPPGPPGPPGRPGDVVFHPGPPGDHGVPGNIGPPGDPGVDGPKGEPGLPCTQC
PCIPGPPGPPGLPGLDGVKGIPGERGAPGMKGNPGSPGSTGLPGFPGFPGDQGHPGLKGS
KGETPLPWGQVGDPGDPGRRGQPGRKGFDGTPGSPGAKGSPGPRGEPALSGRKGDQGPPG
APGSPGPPGPAGPAGPPGYGPPGETGPKGTQGAPGAPGPPGEAGPKGEPGMSTPVPGPPG
PPGPPGQAGRRGVPGLPGPVGKCDPGLPGPDGEPGIPGIGFPGPPGPKGDQGFPGTKGSP
GRPGERGKPGRPGEPGQPGAKGEPGVGTPGEPGKPGFPGERGDPGENGEIGLPGFPGLPG
TPGKDGLDGPPGDPGQPGPPGAKGLPGRCTQGPRGAQGLPGLNGLKGQPGRRGDAGPKGD
PGIPGLDRSGVPGEPGPPGMPGHPGEMGPPGQKGYPGTPGFPGPPGDKGELGMMGYPGTT
GPPGPPGKPGSQGQRGSLGIPGIKGERGRPGAKGERGEKGIPGPSQLPYLKGDKGEAGLK
GFVGNPGEKGNRGIPGLPGQKGLAGLPGLPGPPGPRGDMGSSGNPGGPGPVGMPGSMGNM
GVPGPKGKKGTLGLPGLPGRPGLPGTHGPRGDKGEQGHSEGARPGPPGPKGEPGLPGVKG
TKGERGPPGPPGQPGPAGPDGAPGSPGSPGHPGKPGPDGDLGLKGMKGFPGPPGSTGPPG
PPGLPGLPGTMGMRGNQGHDGIPGPPGEKGETGLLGAHPGPKGSSGVPGVKGDKGAPGLP
GLPGRKGSMGDVGPRGPPGISGLPGPPGLPGAIVPGPKGNRGLPGPRGSPGKPGPPGPPG
LIVKGIKGDKGFMGLPGPKGLPGAVGDMGPPGHPGPPGTPGLLGLRGDPGFPGFPGIKGE
KGNQGFPGSIGHPGPVGPKGPPGGRGKPGTLKIISLPGSPGPPGPPGQPGMKGDPGPLGP
PGNPGPCGPKGKPGKDGKPGSPGPAGEKGNQGSKGQQGPPGLNGLPGLKGKPGDRGTAAS
GTRMQGFVFTRHSQTTAAPSCPEGTQALYSGFSLLFVQGNERAHGQDLGTLGSCLQRFTT
MPFLFCNINNVCNFASRNDYSYWLSTPALMPMNMAPITGRALEPYISRCTVCEGPAMAIA
LHSQTTAIPPCPHGWVSLWKGFSFIMFTSAGSEGAGQALASPGSCLEEFRASPFIECHGR
GTCNYYSNSYSFWLASLNPERMFRKPIPSTVKAGDLEKIISRCQVCMKKRH
NT seq
5016 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcagagactgctccaaggttgcaggcgctcctgctgcctatcctgctactgctc
ctggccacaccacctgtggttagcaagggctgcgtctgcaaaggcaagggccagtgcttc
tgcatggggaccaaaggggaaaagggggagaaaggctatcctgggccccctggttttcct
ggccagaaaggatttccaggtcctgaaggcttgcctggaccacagggacctaagggctct
ctcggacttccgggactcactggccccaaaggcatcagggggataactggattaccagga
ttttcaggtcctcctggacttccaggcatcccaggccaccctggacctcatgggctggct
ggtttaccaggatgcaatggttctaagggtgaacaaggattcccaggcattccggggaca
ccaggctattcagggctcccaggtcctcctggtttgaaaggacaaaagggtgagcctgct
caaggagaagacagagaattcaatggaaaaggtgaccctgggccgccagggctgccaggc
ttccagggttttccaggccccccaggttttccagggcctgctggtccaccaggtcctcca
ggagtttttggttttccaggcgctgtgggacccagaggaccaaaaggtcatatgggcgat
aacgcaataggagaaaaaggcgaaaggggtgtgaaaggattaacaggacctcctgggctg
caaggaacagtgattgttacactcatccgacccccgtacaacaaatcggatttcgagggg
gagaaaggagacaagggagagatgggtgaacctggacgtcctggacctccggggccacct
ggagactcctacggatcagaaaagggtgtgcctggagagcctggtccaaggggaaaacct
ggaaaagacggtgctcctggctttcctggcactcagggagccaagggcaacaggggcctt
cctgggctaatgggtgaagctggcattaagggatggaaaggagacactggccctccagga
tttcctggtccaacagaatattatgatgcatacctggaaaagggagacaaaggaatgcca
ggcccacctgggcccaaaggtgctcgtggtccacagggtcctagtggtccccctggagtt
cctggaagtcctggactgtcaaggcctggcctcagaggaccccctggatggccaggccag
aaaggaaggaaaggggaaagaggaccccctggaaaagacactatgggccctcctggaccc
ctgggctgccctggtttcccaggtccgccaggcccaccaggacctcccggacgtccaggt
gacgttgtttttcacccaggtccacctggtgaccacggagtgccaggcaatataggacct
ccaggagacccaggagttgatgggcccaaaggagaaccaggcctcccgtgcacacagtgc
ccttgcatcccagggccccctggtccccccggattgccaggattagatggtgtcaaagga
atcccaggagaacgaggtgcacctggtatgaaaggaaacccggggtcccctggaagcaca
ggtctcccaggatttccaggattcccaggtgaccaagggcatccaggactgaaaggaagc
aaaggtgaaacacctctaccctgggggcaagtgggtgacccaggcgatcctgggcgcaga
ggtcagccagggagaaagggcttcgatggaactcccggaagtccaggagcaaaaggatct
ccaggacctaggggggaaccggccctgagtggaaggaaaggagaccagggacctccaggg
gctcctggatccccggggcccccaggacctgcaggaccagctggaccaccgggctatgga
cctccaggagaaacaggtccaaagggaacgcaaggagctcctggagccccgggaccacct
ggagaagccggtcctaaaggagaacctggtatgtcaacaccagttccaggtcccccagga
cctccagggcctcctggtcaggctggccgccgaggtgtgcctggtttgcctggacctgtg
ggaaaatgtgatcctggtcttcccggacctgatggtgaaccaggaatcccaggaattgga
tttcctgggcctccaggacctaagggagatcaaggtttcccaggaacaaaaggatcacct
ggtcgtcctggggaaaggggaaagccaggccgtcctggagagccaggacaaccaggagcc
aagggagaaccaggagtaggcacacccggagaaccaggaaaacctggctttccaggagaa
agaggcgatcccggggaaaatggagaaattggactccccggatttccaggcctccctgga
actccaggaaaagacggtcttgatgggcctccaggagacccagggcagcctggaccacct
ggagcaaaagggctcccagggaggtgtacccagggacccaggggtgcccaaggacttccg
ggcttaaatggattgaaagggcaaccaggtagaagaggtgatgcagggccaaagggagac
cctggcatcccaggcttggacagatcaggagtccctggagaacctgggccaccaggaatg
ccaggtcatccaggtgagatgggaccaccaggccaaaaaggatatccaggaactccagga
ttcccagggccgccaggcgataaaggagagcttgggatgatgggctatcctggaaccact
ggccctccagggcctcctgggaaaccaggttcacaggggcagagaggtagccttggaatt
ccaggaataaaaggcgaaagaggacgcccaggagccaaaggtgaacgaggagagaagggg
attcctgggccttcccaacttccatacttaaaaggggacaaaggagaagctgggctcaaa
ggatttgtaggaaatcctggtgaaaaaggaaacagaggcattccagggttaccaggtcag
aaaggcctcgcaggactgcctgggctaccaggccctccaggccctagaggagatatggga
agcagtgggaatcctggaggaccaggaccagtcggcatgccaggaagcatggggaacatg
ggtgtgccaggccctaaagggaaaaaaggaactttgggacttccgggtctacctggaaga
ccaggccttccagggactcatggtccccgaggagataaaggggagcaaggtcattcagaa
ggtgcaaggccaggaccaccgggaccaaagggcgaaccaggactgccgggcgtcaaagga
acgaaaggagaaagaggcccgcctgggccacctggacaaccggggcctgctggacctgac
ggagcccctgggagtcctgggagtcctggccacccagggaagccgggtcctgatggtgat
ttgggtcttaaaggaatgaaaggcttcccaggccctccaggaagcactggccctccaggc
cctccaggacttccaggacttcctggaacaatgggtatgagaggtaaccaaggacatgac
ggaattcctggtcctcctggagaaaagggagaaacaggcttactgggggcccatccaggc
ccaaaaggaagctctggtgttccaggagtcaaaggagacaaaggagctcccggcttgcct
ggcctccctggcaggaaggggtccatgggagatgttggacctcgaggaccccccggcatc
agtgggctcccaggaccaccaggtctacctggggcaattgtccctggcccaaaaggaaac
agaggccttcctggcccaagaggaagtccagggaagccagggcccccaggaccgccagga
cttatcgtaaaaggcataaaaggtgacaaaggatttatgggtctacctggccccaaaggt
ctacctggagctgtaggcgacatgggaccaccaggtcacccgggaccaccaggtactcca
ggccttctaggtctcagaggtgatccgggattcccgggatttccgggcataaaaggagaa
aaaggtaatcaaggatttcctggatcaattggacatccaggaccagttgggccaaaagga
ccgcctggtggacgtggaaaacctggcacacttaagatcatctcccttccaggaagccca
gggccgcctggtccacctggacagccaggaatgaaaggagatcctgggccactgggacca
cctggaaacccagggccctgtggaccaaaaggtaaaccaggaaaggatggaaaaccagga
tctccagggccagctggtgaaaagggcaaccaaggctctaaaggccaacaaggaccacct
ggactgaacggattgccaggcttaaagggcaaacctggagacaggggaacagctgcctct
gggacaagaatgcaagggtttgtcttcacccgacacagtcaaaccacagctgctccttcc
tgtcccgaaggaacacaggcactctatagcgggttttctcttctttttgtacaaggcaat
gaacgtgcgcatggacaagaccttggcactctgggcagctgcctgcagcgattcaccaca
atgccattcttattctgtaacatcaataatgtatgtaattttgcatcacggaatgattat
tcatactggctgtcaacaccagctctgatgccaatgaacatggctccaattactggcaga
gctctcgaaccttatattagcagatgtaccgtttgtgaaggtcctgcgatggccatagct
cttcacagccaaactactgctatccctccatgtcctcatggctgggtttctctctggaaa
ggtttttccttcattatgttcacaagtgcaggctctgagggtgctgggcaagcactggca
tcacctggctcctgcctggaggaattccgagccagtccgtttatagaatgccatggacgg
ggaacctgtaactactactcaaactcctatagtttctggctggcttcattaaacccagaa
agaatgttcagaaaacctattccatcaactgtgaaagctggagatttagaaaaaatcata
agccgctgtcaggtgtgcatgaagaaaagacactga
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