Peromyscus maniculatus bairdii (prairie deer mouse): 102909558
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Entry
102909558 CDS
T11302
Symbol
Psmb4
Name
(RefSeq) proteasome subunit beta type-4
KO
K02736
20S proteasome subunit beta 7 [EC:
3.4.25.1
]
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03050
Proteasome
pmav05010
Alzheimer disease
pmav05012
Parkinson disease
pmav05014
Amyotrophic lateral sclerosis
pmav05016
Huntington disease
pmav05017
Spinocerebellar ataxia
pmav05020
Prion disease
pmav05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
102909558 (Psmb4)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
102909558 (Psmb4)
05012 Parkinson disease
102909558 (Psmb4)
05014 Amyotrophic lateral sclerosis
102909558 (Psmb4)
05016 Huntington disease
102909558 (Psmb4)
05017 Spinocerebellar ataxia
102909558 (Psmb4)
05020 Prion disease
102909558 (Psmb4)
05022 Pathways of neurodegeneration - multiple diseases
102909558 (Psmb4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmav01002
]
102909558 (Psmb4)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pmav03051
]
102909558 (Psmb4)
Enzymes [BR:
pmav01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
102909558 (Psmb4)
Peptidases and inhibitors [BR:
pmav01002
]
Threonine peptidases
Family T1: proteasome family
102909558 (Psmb4)
Proteasome [BR:
pmav03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
beta type subunits
102909558 (Psmb4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Proteasome
Motif
Other DBs
NCBI-GeneID:
102909558
NCBI-ProteinID:
XP_006994854
Ensembl:
ENSPEMG00000016780
UniProt:
A0A6I9MGD6
LinkDB
All DBs
Position
6:complement(74792903..74795649)
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AA seq
264 aa
AA seq
DB search
MEAFWESRAGHWAGGPAPGQFYRVPSTPCALMDPASALCQGPITRTQNPMVTGTSVLGVK
FDGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGDYADFQYLKQVLGQMVIDEE
LLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAP
SLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVLYYRDARSYNRFQIATVTEK
GVEIEGPLSAETNWDIAHMISGFE
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgttttgggagtcacgggctggccactgggccgggggtcctgctccggggcag
ttttaccgggtcccgtccactccctgcgccctcatggatccggcgtccgcgctttgccag
ggtccgatcacccggacccagaaccccatggtgactgggacgtcggtcctcggcgtgaag
ttcgacggcggagtggttattgctgcagacatgctgggctcctacggctccctggctcgt
ttccgcaacatctctcgtattatgcgagtcaacgacagcaccatgctgggggcttcggga
gactacgctgacttccagtatctgaagcaagttctcggccagatggtgattgatgaagag
ctgttgggagatggacacagctatagccctagagctattcactcatggttgacaagggcc
atgtacagccgccgctccaagatgaatcctctgtggaacaccatggtcattggaggctat
gctgatggagaaagcttcctcggttatgtggacatgcttggtgtagcttatgaagccccg
tcactagccactggttatggtgcgtacttggctcagcctctacttcgagaagttctagag
aaacaaccagtgctgagtcagactgaggcccgagaactcgtggaacgctgcatgcgagtg
ctgtactacagagatgcccgttcatacaaccggtttcaaattgccaccgtaactgaaaaa
ggtgtcgagatagaaggaccactctcagcggagaccaactgggacattgcccacatgatc
agtggctttgaatga
DBGET
integrated database retrieval system
