Peromyscus maniculatus bairdii (prairie deer mouse): 102909617
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Entry
102909617 CDS
T11302
Symbol
Nudt21
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102909617 (Nudt21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmav03019
]
102909617 (Nudt21)
Messenger RNA biogenesis [BR:
pmav03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
102909617 (Nudt21)
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
102909617
NCBI-ProteinID:
XP_006985266
Ensembl:
ENSPEMG00000015463
UniProt:
A0A6I9LV87
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Position
5:11182823..11202600
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AA seq
227 aa
AA seq
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MSVVPPNRSQTGWPRGVNQFGNKYIQQTKPLTLERTINLYPLTNYTFGTKEPLYEKDSSV
AARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEG
LKRLMTEILGRQDGVLQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQ
EKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIYN
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggtgccgccgaatcgctcgcagacgggctggccccggggggtcaaccagttc
ggcaacaagtacatccagcagaccaagcccctcaccctggagcgcaccatcaacctgtac
ccgcttaccaattatacctttggtacaaaagaacccctctacgagaaggacagctctgtt
gcggccagatttcagcgcatgcgggaggaatttgataaaattgggatgagaaggactgta
gaaggggttctgattgtacacgagcaccggctaccccatgtgttattgctacagttggga
acaactttcttcaaattacctggtggtgaacttaacccaggagaagatgaagttgaagga
ctaaaacgcttaatgacagagatactgggtcgtcaagatggcgtcctgcaggactgggtc
attgatgactgcataggtaactggtggagaccgaattttgaacctcctcagtatccatat
attcctgcacatattacaaagcccaaggaacataagaagttgtttctggttcagcttcaa
gagaaagctttatttgcagtaccgaaaaattacaagctggtagctgcaccattgtttgaa
ttgtatgacaatgcaccaggatatggacccatcatttctagtcttcctcagctgttaagc
aggttcaattttatctacaactga
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