Peromyscus maniculatus bairdii (prairie deer mouse): 102909622
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Entry
102909622 CDS
T11302
Name
(RefSeq) mitochondrial inner membrane m-AAA protease component AFG3L1
KO
K08956
AFG3 family protein [EC:3.4.24.-]
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
102909622
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmav01002
]
102909622
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pmav03110
]
102909622
Peptidases and inhibitors [BR:
pmav01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
102909622
Chaperones and folding catalysts [BR:
pmav03110
]
Other chaperones and cochaperones
AAA proteases
102909622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
FtsH_ext
AAA_5
AAA_22
TIP49
RuvB_N
AAA_2
AAA_16
AAA_17
AAA_14
nSTAND3
AAA_28
AAA_33
Mg_chelatase
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
102909622
NCBI-ProteinID:
XP_042133771
Ensembl:
ENSPEMG00000008295
UniProt:
A0A8C8TCE0
LinkDB
All DBs
Position
5:57046140..57081432
Genome browser
AA seq
789 aa
AA seq
DB search
MLLRLVGAAGSRALPWRFSNLWRCGGCAGSGVAAWSSVRVGGIARQCHQGICLQQQALQG
RLTSFPPRLCSKPPKGFEKYFKNKKNGRSTDPGNSVTPKKEPKNAGPGGDGGKRGGKQDD
FAWWRRMQKGEFPWDDKDFRSLAVLGAGVAAGFLYFYFRNPGKEITWKHFVQYYLARGLV
ERLEVVNKQFVRVIPVPGTTSEKFVWFNIGSVDTFERNLESAQWELGIEPTNQAAVVYTT
ESDGSLLRSLVPTLVLVSILLYTMKRGPMGTGRGSRGGGLFSVGETTAKILKNNIDVRFA
DVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVP
FITVNGSEFLEMFVGVGPARVRDMFAMARKNAPCILFIDEIDAIGRKRGRGHLGGQSEQE
NTLNQMLVEMDGFNSATNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSSIFK
VHLRPLKLDQRLTKDALSRKLAALTPGFTGADISNVCNEAALIAARHLSSSVQERHFEQA
IERVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHADPLLKVSIIPRGKGLGYAQY
LPREQYLYTREQLFDRMCMMLGGRVAEQLFFGQITTGAQDDLRKVTQSAYAQIVQFGMSE
KLGQVSFDLPRQGETMVEKPYSEATAQLIDEEVRCLIRSAYARTLELLTQCREQVEKVSR
RLLEKEVLEKADMIELLGPRPFAEKSTYEEFVEGTGSLEEDTDLPEGLKDWNQGREEGGT
ERCLQESPA
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgttactccggctggtgggggcggcgggcagtcgggccctgccctggcgtttttccaac
ttgtggcgatgtggcggctgcgcagggagcggcgtggcggcctggagcagcgtgagggtc
ggtggcattgctcggcagtgtcatcaggggatatgcttgcagcagcaggctctgcaggga
agactgacttcgtttcccccacggctgtgttcaaaaccccccaaagggtttgagaaatat
tttaagaataagaagaatggaagaagtacagacccaggaaattcagtaactccaaaaaaa
gaaccaaagaacgctgggcctggaggagatggaggcaagagaggagggaagcaagatgac
tttgcctggtggagacggatgcagaagggagagtttccttgggatgacaaggatttccgg
agtctggctgttttgggggcaggcgtggctgcaggatttttatatttctatttccgaaat
cctggaaaagagatcacctggaaacactttgtacagtattacctagccagaggtctggtg
gagcggctggaggttgtgaacaagcagtttgttcgagttattcctgttcctgggacgaca
tccgagaagttcgtgtggtttaacattggtagtgttgatacctttgagcggaacctcgag
tctgctcagtgggagctggggattgagcccaccaaccaggctgcggtagtctatactact
gagagtgatggctctcttctccgaagcctggtacccaccctggtcctggttagcatcctc
ctctataccatgaagaggggtccaatggggactggtcgtggtagccgaggaggaggcctc
ttcagtgttggtgagacaacagccaagatcttaaaaaacaacattgatgtgcgattcgca
gatgtggctggctgtgaagaggccaaattggaaattatggagtttgtgaatttcctgaag
aacccaaagcagtatcaggacttaggagccaaaattccaaagggagcaatgctcactggc
ccacctggaactggcaaaacacttcttgcaaaagcaactgctggagaggccaacgtgccc
ttcatcactgtgaatgggtcggagttcctggaaatgtttgttggtgttgggccggcacgg
gttcgtgacatgtttgcgatggcccgaaaaaatgctccttgtattttattcattgatgag
attgatgcaattggcaggaagcgaggccgtggtcacctgggaggccagagtgagcaggag
aacactttaaaccagatgcttgtggagatggatgggtttaactctgccactaatgtggta
gtgctagctggcaccaatcgccctgatatccttgacccagccctaacacggcctggccgg
tttgaccgccagatctacattggtccccctgatatcaaaggcaggtcctctattttcaag
gtccacttgcgtccactcaagctagaccaacgcctcaccaaagatgctctttcgaggaag
ctagcggctctcactccgggcttcactggtgctgatatttctaatgtgtgcaatgaagca
gcactgattgctgcccgccatcttagctcttctgtccaggagcggcactttgagcaagcc
atcgagagggtcattggaggccttgagaagaagacgcaggtcctacaacccagtgaaaag
acaactgtagcctaccatgaggctgggcatgcagtggtgggctggttcttggaacatgca
gatcctctgctgaaggtgtccatcatccctcggggcaaggggcttggctacgcccagtac
cttccccgtgagcagtacctctacacacgggagcagcttttcgaccgcatgtgtatgatg
ctggggggtagggtggctgagcagctcttctttggccagatcaccacaggggctcaggat
gatctgaggaaggtcacccagagtgcctatgcccagattgtgcagtttggaatgagtgag
aagctaggccaggtatcctttgacctccccagacaaggagaaaccatggtggaaaagcca
tacagtgaagcaactgcccaactcatcgatgaggaagtccggtgccttatcaggtctgcc
tatgctcggaccctggagctgctcacgcagtgccgggagcaggtagagaaggtgagcagg
cgactcctggagaaggaagtgctggagaaggccgacatgatagagctcctgggccctcgg
ccctttgcagagaagtccacctatgaggagtttgtagagggcaccggcagcctggaggag
gacacagacctccctgaggggctgaaagactggaatcagggacgggaggaaggaggcact
gaacggtgcttacaggagagccctgcatag
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integrated database retrieval system
