Peromyscus maniculatus bairdii (prairie deer mouse): 102909772
Help
Entry
102909772 CDS
T11302
Symbol
Atxn1l
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin 1/1L
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04330
Notch signaling pathway
pmav05017
Spinocerebellar ataxia
pmav05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
102909772 (Atxn1l)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
102909772 (Atxn1l)
05022 Pathways of neurodegeneration - multiple diseases
102909772 (Atxn1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
102909772
NCBI-ProteinID:
XP_006974181
Ensembl:
ENSPEMG00000017466
UniProt:
A0A6I9L780
LinkDB
All DBs
Position
5:complement(42739016..42750350)
Genome browser
AA seq
687 aa
AA seq
DB search
MKPVHERSQECLPPKKRDLPVTSEDMGRTASCSTNHTPSSDASEWSRGVVVAGQSQTGAR
VSLGGDGTEAITGLTVDQYGMLYKVAVPPATFSPTGLPSVVNMSPLPPTFNVASSLIQHP
GIHYPPVHYAQLPSTSLQFIGSPYSLPYAVPPNFLPSPLLSPSANIATTHLPHFVPYASL
LAEEATPPPQAASPAQPFNKSSSATSPPGQLPHHSNAQPLDLAPGRMPIYYQMSRLPAGY
TLHETPTAGASPVLTPQEGQSALEAAAANGQRQRDRNVRRESEALDSTGSKGEGQGLVPV
VEGMADGQLFSGSQTPRVEVAAPAHRGTPDTDLEVQRVVGTLASQDYRVVAAQRKDEASP
LNLSHHTLDHQGEGRGSARNPTELVEKNQARVFYPQSHQEPVKHRPLPKAMVVANGNLVP
TGADPSLLPVGSEILGAPSLDMQARATFPDKEPTPPPVTSSHLPSHFMKGAIIQLATGEL
KRVEDLQTQDFVRSAEVSGGLKIDSSTVVDIQESQWPGFVMLHFVVGEQQSKVSIEVPPE
HPFFVYGQGWSSCSPGRTAQLFSLPCHRLQVGDVCISISLQSLNSNSVSQTSCAPPGQPA
IPRERPERTVLGPRELCDSEGKIPPSGEGSRVGEPSQPEPGAQACWPAPSFQRYSVQGEE
ARAALLRPSFIPQEVKLSIEGRSNAGK
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctgttcatgaaaggagtcaggaatgccttccaccaaagaaacgagacctccct
gtgaccagcgaggacatggggagaactgccagctgctccacaaaccacacgccctccagt
gatgcctctgaatggtcccgaggggtcgtggtggccgggcagagccagacgggagccaga
gtcagcctcgggggcgatggaactgaggccatcactggtctgacagtcgatcagtatggc
atgctctataaggtggctgtgccacctgccaccttttcaccaactggcctcccatctgtt
gtgaacatgagtcccttaccccccacgtttaatgtagcgtcttcactgattcaacatcca
ggaatccactatcccccagtccactatgctcagctcccatccacctcactgcagtttatt
gggtctccttatagccttccttatgctgtgccacctaatttcctacctagtcccctcctt
tctccttctgccaacattgccactactcaccttccacactttgtgccatatgcctccctc
ctagccgaagaagctactcctcccccccaggctgcatccccagcccagccatttaacaag
tcctcttctgccacctccccacccggccagttgccacatcactcgaacgctcaaccactg
gatcttgctccaggccggatgcccatttattatcaaatgtctaggctacctgctggatat
accttgcatgaaactccaacagcaggtgccagccccgttcttacccctcaggagggccag
tctgctctcgaagcagctgctgccaatggacagagacagcgagatcgaaatgtaagacga
gaaagtgaagcccttgattccaccggcagcaagggcgaaggccaaggactggtgccggtg
gtcgaaggcatggcggacggacagttgttttcagggtctcagactccacgagtggaggtg
gcggcgccagcacaccgagggaccccagacaccgacctggaggtccagcgggtagttggc
actttagcttctcaggactatcgtgtggtggcagctcagaggaaagatgaagccagccct
cttaacctatcccatcatacccttgaccatcagggtgagggacgagggtcagccaggaat
cctacagaactggtggagaaaaatcaggcccgtgtgttctaccctcagtcgcatcaggaa
ccagtaaaacacagacctttacccaaagcaatggttgtagccaatggcaacctggtgccc
actggagctgaccctagcctgctgcctgtaggctcggagatcctgggggcaccaagtctg
gacatgcaggccagagccaccttcccagacaaggagccaacaccacctcctgttacctcc
tcccacttgccctcccatttcatgaaaggcgccatcattcagctggctacaggagagctg
aagcgggtagaggacctccaaacccaggattttgtgcgcagtgccgaagtgagtgggggg
ctgaagattgactctagcacggttgtggacattcaggagagccagtggcctggatttgtc
atgctgcattttgtggttggtgaacagcagagcaaagtgagcatcgaggtgcctcccgag
caccccttttttgtatatggccagggctggtcctcctgcagccctgggcggactgcacag
ctcttctctctgccctgtcaccggctccaggtgggagatgtctgcatctctatcagttta
cagagcttgaacagtaactcagtttctcagaccagctgtgctcccccaggccagccggct
ataccccgagaaaggcctgagaggacagtcttggggcccagagaactatgtgacagcgag
gggaagatcccgccttcaggagagggttcccgggtgggagagccctcccagcctgagcct
ggtgctcaggcctgctggccagccccaagcttccaaagatacagcgtgcaaggggaggag
gcgcgggctgcgctgctccgtccctctttcatcccacaggaggtaaagctgtccatcgaa
gggcgttccaatgcaggaaaatga
DBGET
integrated database retrieval system
