Peromyscus maniculatus bairdii (prairie deer mouse): 102909817
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Entry
102909817 CDS
T11302
Symbol
Pms2
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X2
KO
K10858
DNA mismatch repair protein PMS2
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03430
Mismatch repair
pmav03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
102909817 (Pms2)
03460 Fanconi anemia pathway
102909817 (Pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmav03400
]
102909817 (Pms2)
DNA repair and recombination proteins [BR:
pmav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
102909817 (Pms2)
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GFIT
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NCBI-GeneID:
102909817
NCBI-ProteinID:
XP_006982718
UniProt:
A0A6I9LPB0
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Position
23:complement(38256779..38280758)
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AA seq
862 aa
AA seq
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MEQTEGASTELAKAIRPIDGKSVHQICSGQVVLSLSTAVKELIENSVDAGATSIDIRLKD
YGVDLIEVSDNGCGVEEENFEGLALKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDV
TISTCHVSASIGTRLVLDHNGKITQKTPYPRPKGTTVSVQHLFYTLPVRHKEFQRNIKKE
YAKMVQVLQAYCVISTGIRVSCTNQLGQGKRQPVVGTSGSSSMKENIGSVFGQKQLQSLI
PFVQLPPSDSVCEEYGLSPSKTPHNLFHISGFISHCTHGTGRSSTDRQFFFINQRPCDPA
KVSKLVNEVYHMYNRHQYPCVVLNISVDSECVDINVTPDKRQILLQEEKLLLAILKTSLI
GMFDSDANKLNVNQQSLLDIEGNLVKMHTEEIEKPVSGKQDNSLKITADEKRVASISRLR
EAFSLHPTTETKSWGPVTPELRQNYPHQKRGVPSSCPSNLISYRGLCGSQDKVVSPKESP
GDCMDRVKIEKDSGLSSTSASSEEGFSTPEVASSVSSDFTASSPEDRSSQETMDCGEQLL
GMDCHLSGTGHHLKQEDSKYKCTALPPPTPHSSSNAKRVKTEERPSNTDIPPRLLDTQNT
SAAQVDVAVKINKKIVLLNFSMSSLAKRMKQLQHQKQQNESEQSYRKFRAKICPGENQAA
EDELRKEISKSMFAEMEILGQFNLGFIITKLKEDLFLVDQHAADEKYNFEMLQQHTVLQV
QRLITPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDEDAPVTERAKLISLPTSKNWTFGP
QDIDELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALNTKEMKKLITHMGEMDHP
WNCPHGRPTMRHIANLDVISQK
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaccgagggcgcgagtacagaacttgctaaggccatcaggcctattgatggg
aagtcagtccatcaaatttgttctgggcaggtggtactcagtttaagcactgctgtgaag
gagctgatagaaaacagtgtggatgctggtgctaccagtattgatataaggcttaaagac
tatggggtggacctcattgaagtttcagacaatggatgtggggtagaagaagaaaacttt
gaaggtctagctctgaaacatcacacttctaagatacaagagtttgccgacctgactcag
gttgaaacttttggctttcggggggaagctctgagctcactgtgtgcactgagtgatgtc
actatatctacctgccatgtgtctgcaagcattgggactcgactggtgttagatcacaat
gggaaaatcacccagaaaactccctacccacgacccaaaggaacaacagtcagcgtgcag
cacttgttttatacactacctgtgcgtcacaaagaatttcaaaggaatattaaaaaggag
tatgccaagatggtccaggtcttacaggcatactgtgtcatttcaacaggcatccgtgta
agttgcactaatcagcttggacaaggaaaacgacaacctgtggtgggcacaagcggaagc
tccagcatgaaggaaaatatcggctctgtgtttggacagaagcagttgcaaagcctcatt
ccttttgttcagctgccccctagtgactctgtttgtgaagagtatggcctgagcccttct
aagactccacataatcttttccacatttcaggcttcatttcacactgtacacatggaact
ggaaggagctccacagacagacagtttttcttcatcaatcagcgtccttgtgaccctgca
aaggtctctaaacttgtaaatgaggtttatcacatgtataatcgacatcagtatccatgt
gttgttcttaacatttccgttgattcagaatgtgttgatattaatgtgactccagataaa
aggcaaattttactacaggaggagaagcttttgctggcaattttaaagacctccttgata
ggaatgttcgacagcgatgcaaacaagcttaatgtcaaccagcagtcactgctggacatt
gaaggtaacttagtaaagatgcacacagaagaaatagaaaagcctgtgtcaggaaagcaa
gataattcattgaagatcacagcagatgagaaaagggtagcatccatttccaggctgaga
gaggccttttctcttcatcctaccacagagaccaagtcttggggcccagtgacccctgaa
ctgagacagaattatccacatcagaaaaggggtgtaccatcttcttgtccttcgaacctc
atctcttatagaggtctgtgtggctcccaggacaaagtggtgagtcccaaggagagccct
ggtgactgtatggacagagtgaaaatagaaaaagactcagggctcagcagcacctcagcc
agctctgaggaagggtttagcaccccagaagtggccagtagcgttagcagtgactttaca
gcgagctctccagaagacagatcttcacaggaaaccatggactgtggtgagcagttactt
ggaatggactgccatctttcaggtacaggacaccatttgaagcaagaagatagcaaatat
aaatgtacagctttgcctccaccaactcctcactcttcctcaaacgctaagcgtgtcaag
acggaagaaaggccttcaaatactgacattcctccaaggttgcttgatactcagaacacc
tcagcagctcaggttgatgtagctgtgaaaattaataagaaaatagtgctcctgaacttt
tctatgagttccttagctaaacggatgaaacagttacagcaccagaagcagcagaatgaa
agtgagcagagttacaggaaatttagggccaagatttgccctggagaaaatcaagcggca
gaagatgaactcagaaaagagattagtaaatcaatgtttgcagagatggagatcttgggt
caatttaacctgggatttataataaccaaactgaaggaggacctcttcctggtggaccag
catgctgcggacgagaagtacaactttgagatgctgcagcagcacactgtgctccaggtg
cagaggcttatcacgccccagactctgaacttaaccgctgtcaatgaagctgtgctgata
gaaaatctggaaatattcagaaagaatggctttgattttgtcattgatgaggatgctcca
gtcactgaaagagctaaattgatttccttgccaactagtaaaaactggacctttggaccc
caagacatagatgaactgatctttatgctaagtgacagccctggggtcatgtgccggccc
tcaagagtcaggcagatgtttgcttctcgagcctgtcggaagtctgtgatgattggaact
gctctcaatacaaaggagatgaagaagctcatcacccacatgggtgagatggaccacccc
tggaactgtccccatggaaggccaaccatgaggcacattgcaaatctggatgtcatttct
cagaagtga
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