Peromyscus maniculatus bairdii (prairie deer mouse): 102909891
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Entry
102909891 CDS
T11302
Symbol
Taf4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03022
Basal transcription factors
pmav05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102909891 (Taf4)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
102909891 (Taf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmav03021
]
102909891 (Taf4)
03036 Chromosome and associated proteins [BR:
pmav03036
]
102909891 (Taf4)
Transcription machinery [BR:
pmav03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102909891 (Taf4)
Coactivators
SAGA/TFTC/STAGA complex
102909891 (Taf4)
Chromosome and associated proteins [BR:
pmav03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
102909891 (Taf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
102909891
NCBI-ProteinID:
XP_006976103
Ensembl:
ENSPEMG00000015031
LinkDB
All DBs
Position
4:complement(157240092..157314504)
Genome browser
AA seq
1044 aa
AA seq
DB search
MAAGSDLLDEVFFNSEVDEKVVSDLVGSLESQLAASAAHHHHLAPRTPELRAAAAGALGN
HVVSGSPAGAAGAGPAASAEGAPAAAPEPPPAGRARPAGGGPRHPGSSSPRRLLVPAGPA
PAPAKLRPPPEASAGPCPAAAAAATAAAAAAAAGPDPATAAPPAGSGASKPGPPGPPGPG
AAQTLNGSAAPPTAPHAAPAVSPVNNGPAPPPAAGSVIQAAPAPAPAAPSPPAAPAPAAP
PPPAPPAPAAPARPPGHPAAPAPPVSPAAAAAAAAAAQNGAAPAPAAASGGAAGLGQPGA
GALGAKAEAPKPVPGTGPAAAAAAAAAAAGVAGGGAAGGVLLGPAMPGALPVPAPGTPAG
LAKGAAAATPSLPRTPAATTGAIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRS
ENGQLLMIPQQALAQMQAHAQAQPQSTMAPRPATPTGAPPVQISTVQAPGTPIIARQVTP
TTIIKQVSQAQTTVQPTTTLQRSPGVQPQLVLGGSAQTASLGTATAVQTGTPQRTVPGAS
TTSTAATETMENVKKCKSFLSTLIKLASSGKQSTETAANVKELVQNLLDGKIEAEDFTSR
LYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPPASQATTALTAVVLSSS
VQRTAGKTAASVTSALQPPVISLTQPTQVGVGKQAPPTPLVIQQPPKPGALIRPPQVTLT
QTPMVALRQPHNRIMLTTPQQIQLNQLQPVPVVKPTVLPGTKALSTVSAQAAAAQKNKLK
EPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDDTFLLPAPLQRR
ILEIGKKHGITELHPDVVSYVSHATQQRLQNLVEKISETAQQKNFSYKDDDRYEQASDVR
AQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQ
RDANLTALAAIGPRKKRKVDCAGPGSGAEGSGPGAAVPGGSGVGTPRQFTRQRITRVNLR
DLIFCLENERETSHSLLLYKAFLK
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggacgaggtcttcttcaacagcgaggtggacgagaaa
gtggtgagcgatctggtgggctcgctcgagtcgcagctggcggccagcgcggcccaccac
caccacctcgcgccgcgcacgcccgagctgcgggccgcggccgccggcgcgctcgggaac
catgttgtgagcggcagcccggccggagccgcgggcgcagggccggccgcctccgccgag
ggcgcgcccgcagcggcgccggagccgccccccgcaggtagagcgcggccggcgggtggg
ggcccgcggcacccgggctccagctcaccgcgccgcttgcttgtccccgcagggcccgcg
ccggcgcccgccaagctgaggccgccgcccgaggccagcgcggggccctgcccggccgcc
gccgccgccgccaccgccgccgccgctgccgccgccgcggggcccgatcccgccaccgcc
gccccgcccgccggctccggcgcctccaaacccggcccgcctggcccgcccggccccggc
gccgcgcaaactttgaatgggagcgccgcgccgcccaccgcgccgcacgccgcacctgct
gtcagcccggtcaacaacgggcccgcgccgccgcccgccgccggctctgtcatccaggcg
gcccccgcgcccgcgcccgccgcgccctcgcctcccgccgcgcccgcgcccgccgcgccc
ccgccgcccgcgcccccagcgcccgccgcgccagcccggccgcctgggcaccccgccgcg
cccgcgccccccgtgtcacccgccgccgccgccgccgccgccgctgccgcgcagaacggg
gccgctcctgcccccgccgcggcctccgggggcgccgcggggctgggccagccgggcgcg
ggcgcgctgggggccaaggccgaggcgcccaagcccgtgcccgggaccgggccggcggcg
gcagcggcggcggcggcggcggcggcgggggtcgcgggcgggggcgcggcgggtggcgtg
ctgctcgggcctgccatgccgggcgcgctgccggtgcctgcgcccgggacccccgcgggg
ctggcaaagggcgcggccgcggcgacccccagtctgcctcggacgccggcggccaccacc
ggcgctatccgggccacgctgacgcccaccgtactggccccgcgcctgccgcagccgccg
cagaacccgaccaacatccagaacttccagctgcccccaggaatggtcctcgtgcggagt
gagaatgggcagttgttaatgatccctcagcaagccctggcccagatgcaggcccatgcc
caggcccagcctcagagcaccatggcaccccgtcctgcaacccccacaggtgctccacct
gtccagatctccaccgtgcaggctccaggaacacctattattgcacggcaggtgacccca
actaccataattaagcaggtgtctcaggcccagacgacggtacagcccaccacaaccctt
cagcggtctcctggggtacagcctcagctggttctgggtggttctgcacagacagcctca
ctcggaactgccacagctgttcagacagggacacctcaacgaacagtccccggggccagc
accacctccacagctgccacggaaactatggaaaatgtgaagaaatgtaaaagttttcta
tctacattaataaaactggcttcctctggtaaacagtctacagagacagcggctaatgtg
aaagaattagtacaaaacttgctggatgggaaaattgaagcagaagatttcactagcagg
ttatatcgagaactgaactcttcacctcaaccttaccttgtgcctttcctgaagaggagc
ttacctgccttgagacagctgaccccagactccgcggcctttatccagcagagccagcag
caacagccacctgcctcgcaggccaccactgcactcacggctgtggtgctgagcagctcg
gtgcagcgcacagctgggaaaacagctgcctcggtgaccagcgccctccagcccccggtc
atcagcctcacgcagcccacacaggttggcgttggcaagcaggcaccgcccacaccactg
gtgatccagcagcccccgaagcctggagccttgatccggcccccgcaggtgaccttgacg
cagacacccatggtcgcattgcggcagcctcacaaccggatcatgctcaccacaccacag
cagatccaactgaaccagctgcagccagtccctgtggtgaaacccaccgtgttacctgga
accaaagccctttctactgtgtctgcacaagcagccgctgcacagaaaaacaagctcaag
gagccagggggaggctccttccgggatgacgatgacatcaatgatgttgcgtcaatggct
ggagtgaacctgtctgaagaaagtgcaagaatattggccacaaactctgagttggtgggg
acactgactcgatcctgtaaagacgacaccttcctcctccccgcacctttgcagaggagg
atactggaaataggtaaaaagcacggcatcacggaactgcatccagatgtagtgagttac
gtgtctcatgccacacagcaaaggctgcagaatcttgtagaaaaaatatctgaaacagct
cagcagaaaaacttctcctataaggatgacgacagatacgagcaagcgagtgatgtccgg
gctcagctcaaattctttgaacagcttgatcagattgaaaagcagaggaaagatgagcag
gagagggagatcttgatgcgggcagcaaagtctcggtccagacaagaagacccagagcaa
ttaaggttgaagcagaaagcaaaagagatgcagcagcaggagctggcacagatgcgacag
cgagatgccaacctcacagcattggcggcgatcgggcccaggaaaaagaggaaagtggac
tgtgccgggccgggatcgggagcagagggctcaggcccaggcgcagcggtcccaggcggc
tccggcgtgggaacccccagacagttcacacggcaaagaatcacgcgggtcaacctcagg
gacctcatattttgtttagaaaatgagcgtgagacaagccattcactgttgctctacaaa
gcattccttaagtaa
DBGET
integrated database retrieval system
