Peromyscus maniculatus bairdii (prairie deer mouse): 102909913
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Entry
102909913 CDS
T11302
Symbol
Sox21
Name
(RefSeq) transcription factor SOX-21
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmav03000
]
102909913 (Sox21)
Transcription factors [BR:
pmav03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102909913 (Sox21)
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Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
102909913
NCBI-ProteinID:
XP_042141336
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All DBs
Position
9:complement(115562411..115563890)
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AA seq
276 aa
AA seq
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MSKPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKFAFPVPYGLGGVADAEHPALKAGAGLHAG
AGGGLVPESLLANPEKAAAAAAAAAARVFFPQSAAAAAAAAAAAAAGSPYSLLDLGSKMA
EISSSSSGLPYASSLGYPAAGAGAFHGAAAAAAAAAAAAGGHTHSHPSPGNPGYMIPCNC
SAWPSPGLQPPLAYILLPGMGKPQLDPYPAAYAAAL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccggtggaccacgtcaagcgacccatgaacgccttcatggtgtggtcgcgg
gcccagcggcggaagatggcccaggagaacccgaagatgcacaactcggagatcagcaag
cgcctgggcgccgagtggaagctgctgaccgagtcggagaagaggccgttcatcgacgag
gcgaagcgcctgcgagccatgcacatgaaggagcatcccgactacaagtaccggccgcgg
cgcaagcccaagacgctgctcaagaaggacaagttcgccttcccggtgccctacggcctg
ggcggcgtggcggacgccgagcacccggcgctcaaggcgggagccgggctgcacgcaggc
gcgggcggcggcctggtccccgagtccctgctcgcgaaccccgagaaggcggccgccgcc
gctgccgccgccgccgcgcgcgtcttcttcccgcagtccgcggccgccgccgccgccgcc
gctgccgccgccgccgcgggcagcccctactccctgctcgacctgggctccaagatggca
gagatctcgtcgtcgtcgtccggcctgccgtacgcgtcgtcgctcgggtaccccgccgcg
ggcgcgggggccttccacggtgcggcggcggcggctgcagcggccgcggcggccgccggg
gggcacacgcactcgcaccccagcccgggcaacccgggctacatgatcccgtgcaactgc
agcgcgtggcccagcccggggctgcagccgccgctcgcctacatcctgctgccaggcatg
ggcaagcctcagctggacccctaccccgcggcctacgccgccgcgctatga
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