KEGG   Peromyscus maniculatus bairdii (prairie deer mouse): 102909974
Entry
102909974         CDS       T11302                                 
Symbol
Becn1
Name
(RefSeq) beclin-1 isoform X1
  KO
K08334  beclin
Organism
pmav  Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04136  Autophagy - other
pmav04137  Mitophagy - animal
pmav04140  Autophagy - animal
pmav04145  Phagocytosis
pmav04215  Apoptosis - multiple species
pmav04371  Apelin signaling pathway
pmav05010  Alzheimer disease
pmav05014  Amyotrophic lateral sclerosis
pmav05016  Huntington disease
pmav05017  Spinocerebellar ataxia
pmav05022  Pathways of neurodegeneration - multiple diseases
pmav05167  Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:pmav00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    102909974 (Becn1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    102909974 (Becn1)
   04140 Autophagy - animal
    102909974 (Becn1)
   04136 Autophagy - other
    102909974 (Becn1)
   04137 Mitophagy - animal
    102909974 (Becn1)
  09143 Cell growth and death
   04215 Apoptosis - multiple species
    102909974 (Becn1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    102909974 (Becn1)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    102909974 (Becn1)
   05014 Amyotrophic lateral sclerosis
    102909974 (Becn1)
   05016 Huntington disease
    102909974 (Becn1)
   05017 Spinocerebellar ataxia
    102909974 (Becn1)
   05022 Pathways of neurodegeneration - multiple diseases
    102909974 (Becn1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pmav04131]
    102909974 (Becn1)
   03029 Mitochondrial biogenesis [BR:pmav03029]
    102909974 (Becn1)
Membrane trafficking [BR:pmav04131]
 Autophagy
  Autophagosome formation proteins
   PI3K complex
    102909974 (Becn1)
Mitochondrial biogenesis [BR:pmav03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    102909974 (Becn1)
SSDB
Motif
Pfam: APG6 APG6_N BH3 CC_Bre1 MT CCDC170_1st NDC80_loop HAUS-augmin3 LMBR1 V_ATPase_I Exonuc_VII_L GAS
Other DBs
NCBI-GeneID: 102909974
NCBI-ProteinID: XP_076433802
Ensembl: ENSPEMG00000011686
LinkDB
Position
8:complement(88305329..88318241)
AA seq 448 aa
MEGSKASSSTMQVSFVCQRCSQPLKLDTSFKILDRVTIQELTAPLLTTAQAKPGETQEEE
AHSGEEPFIETRQDGVSRRFIPPARMMSTESVNSFTLIGEASDGGTMENLSRRLKVTGDL
FDIMSGQTDVDHPLCEECTDTLLDQLDTQLNVTENECQNYKRCLEILEQMNEDDSEQLQR
ELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQLE
LDDELKSVENQMRYAQMQLDKLKKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVEWNE
INAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELPLYCSGGLRFFWD
NKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSGGSYSIKTQFNSE
EQWTKALKFMLTNLKWGLAWVSSQFYNK
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggaggggtctaaggcgtccagcagcaccatgcaggtgagcttcgtgtgccagcgctgc
agccagcctctgaaactggacacgagcttcaagatcctggaccgagtcaccatccaggaa
cttacagctccattacttaccacagcccaggcgaagccaggagagacccaggaggaagag
gctcactcaggagaggagccatttatcgaaactcgccaggatggtgtctctcgaagattc
atccccccagccaggatgatgtctacagaaagcgtgaatagcttcactctgatcggggag
gcatctgacggtggcaccatggagaatctcagccggagactcaaggtcactggagacctt
tttgacatcatgtcgggtcagacagatgtggatcacccactgtgtgaggaatgcacagat
actctcttagaccagctggacactcagctcaatgtcaccgaaaatgaatgtcagaactac
aaacgctgtttggagatcctcgagcagatgaacgaggatgacagtgaacagctacaaagg
gagctgaaagagctggccttagaggaggagaggctgatccaggagctagaagatgtggaa
aaaaaccgcaaggtagtggcagaaaacctggagaaggtccaggctgaggcggagagactg
gatcaggaggaagctcagtaccagcgggaatacagtgaatttaaaagacagcagctggag
ctggatgatgagctgaagagcgtagaaaaccagatgcggtatgcccagatgcagctggac
aaactgaagaaaaccaacgtctttaatgcaaccttccatatctggcacagtggacaattt
ggcacaatcaataacttcagactaggtcgtttacccagtgttcctgtggagtggaatgaa
atcaatgctgcctggggccagacagtgttgctgctccatgcactagccaataagatgggt
ctgaagtttcagaggtaccgacttgttccctatggaaatcattcatatctggagtctctg
acagacaagtctaaggagttgccgttatactgttctgggggattgcggtttttctgggac
aacaagtttgaccatgcaatggtagcttttctcgactgtgtgcagcagttcaaagaagag
gtggagaagggcgagacacgattttgtcttccatacaggatggatgtggagaaaggcaag
attgaagatactggaggcagtggtggctcttattccatcaaaacgcagtttaactctgag
gagcaatggacgaaagcactcaagttcatgctgacgaatctgaagtggggtcttgcttgg
gtgtcctcacagttctataacaagtga

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