Peromyscus maniculatus bairdii (prairie deer mouse): 102910306
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Entry
102910306 CDS
T11302
Symbol
Sema6d
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
102910306 (Sema6d)
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NCBI-GeneID:
102910306
NCBI-ProteinID:
XP_042132053
Ensembl:
ENSPEMG00000019804
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Position
4:101891954..102461329
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AA seq
1086 aa
AA seq
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MRFFLLCFHVLFLLVSRLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ
LMLKIRDTLYIAGRDQVYTVNLNEIPKTEVIPSKKLTWRSRQQDRENCAMKGKHKDECHN
FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLNTLEYDGEEISGLARCPFDARQTNVALFAD
GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI
AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI
TDIIQINGVPTVIGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED
KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYR
LTAIEVDRSAGPYQNYTVIFVGSEAGVVLKVLAKTSPFSLNDSVLLEEIEAYNQAKCNAE
SEEDRKVVSLQLDKDHHALYVAFSSCVVRIPLSRCERYGSCKKSCIASRDPYCGWLSQGV
CERVTLGMLLLTEDLFASHNHSAGGFEQDTEYGNTAHLGDCHESLPTSTTPDYKIFGGPT
SDMEVSSSSVATVASSPEITSKVVDTWRPKLTSSRKFVVQDDPYTSDFTDTLSGIPKGVR
WEVQSGDSNQMVHMNVLITCVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAESAQSC
TDSSGSFAKLNGLFDSPVKEYQQNIDSPKLYSNLLTSRKELPPNTDTKSMVMDHRGQPPE
LAALPTPESTPVLHQKTLQAMKSHSDKAHGHGASRKEHPQFFPSSPPPHSPLSHGHIPSA
IVLPNATHDYNTSFSNSNAHKAEKKLQNIDHPLTKSSSKREHRRSVDSRNTLNDLLKHLN
DPNSNPKAIMGEIHMAHQTLMLDPVGPMSEVPPKVPNREASLYSPPSTLPRNSPTKRVDV
PTTPGVPMTSLERQRGYHKNSSQRHSISAVPKNLNSPNGVLLSRQPSMNRGGYMPTPTGA
KVDFIQGTPVSVHLQPSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTTSVRP
LNKYTY
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgaggttctttctgctttgcttccacgtgctgttccttctggtctccaggttacgggca
gtcagcttcccggaagacgacgagccccttaacactgttgattatcactattcaaggcaa
tatccggtttttagaggacgcccttcaggcaacgaatcgcagcataggctggactttcag
ctgatgctgaaaattcgagacacactttatattgctggcagagatcaagtctatacagtg
aacttaaatgaaatccccaaaacagaggtcataccaagcaagaagctgacgtggaggtcc
aggcaacaggatcgagaaaactgtgctatgaaaggcaagcataaagacgagtgccacaac
ttcatcaaagtatttgttccaagaaacgatgagatggtttttgtttgtggtaccaatgct
ttcaaccccatgtgtagatactataggttgaataccttagagtatgatggggaagaaatt
agcggcctggcacgatgcccatttgatgccagacaaaccaatgttgccctctttgctgat
gggaaactgtattctgctacagtggccgacttcctggctagtgatgctgtcatttataga
agcatgggtgacggatctgcccttagaacaataaaatatgattccaaatggatcaaagaa
ccacactttcttcatgccattgaatatggaaactatgtctatttcttcttcagagaaatc
gctgtggaacataataacttaggcaaggctgtgtattcccgcgtggctcgcatttgtaaa
aacgacatgggtggctcccagcgggttctggagaagcactggacttccttcctgaaggcc
aggcttaactgctctgtccccggagattcctttttctactttgatgttctgcagtccatc
acagacataatccaaatcaacggcgtccccaccgtgattggggtcttcaccacgcagctt
aacagcattcctggttctgcagtctgtgcctttagcatggacgacattgagaaggtgttc
aaagggcgattcaaagagcagaaaaccccagactctgtttggacggcagttcccgaagac
aaagtaccaaaaccaaggcctggctgctgtgccaagcacggccttgcagaagcttacaaa
acctccatcgacttcccagacgagaccctgtctttcatcaaatcccatcccctgatggac
tctgctgttccccccattgctgatgagccctggttcacaaagacccgggtcaggtacagg
ttgacggccatcgaagtggaccgttcggcggggccctaccaaaactacaccgtcatcttt
gtcggctctgaagccggcgtggtgctgaaagtgttggcaaagaccagccctttctctttg
aatgacagtgtattgcttgaggagattgaagcttacaaccaagccaagtgcaacgctgag
agcgaggaggacagaaaggtcgtctcgttacagctggacaaagatcaccatgctttgtac
gtggccttctctagctgcgtcgtccgcatccccctcagtcgctgtgagcgctacggatcc
tgtaaaaagtcttgcatcgcatcgcgtgacccgtactgcggttggttaagccagggcgtt
tgtgagagagtgaccctagggatgctgctgttaaccgaagacttgtttgcttcccataac
cacagcgctggaggatttgagcaagacacagagtacggcaacacggcccacctaggggac
tgccacgaaagtttgcctacttcaactacaccagattacaaaatatttggcggtccaaca
tctgacatggaggtctcttcatcttctgttgccactgtggcaagtagcccagaaattaca
tctaaagtggttgatacctggagacctaaactgacgagctcccggaaatttgtagttcaa
gatgacccatacacttctgattttactgatactttatcaggtatcccaaagggtgtacgg
tgggaagtccaatctggagactccaaccagatggtccatatgaatgtcctcatcacttgt
gtgttcgcggctttcgtcttgggcgcattcattgcaggcgtggctgtatactgctaccgc
gacatgtttgttcgcaagaacagaaagatccataaagatgcggaatcagcccagtcatgc
acagactccagcggaagctttgccaagctgaatggtctctttgacagtcccgtcaaggaa
taccaacagaacattgattctcctaaactctatagcaacctgctgaccagtcggaaggag
ctgccacccaacacggatacaaaatccatggtcatggaccaccgaggccagcctccagag
ctggctgctctccccactccagagtccacacctgtactccaccagaagaccctgcaggcc
atgaagagccactctgacaaggcccacggccatggtgcttcaaggaaagaacacccccag
ttttttccttctagtcctccaccccattccccattaagtcacgggcacatccccagtgcc
attgttcttccaaacgccacccacgactacaatacgtcattttcaaactctaatgctcat
aaagctgaaaagaaacttcagaacattgaccatcctcttacaaagtcgtccagtaagagg
gagcaccggcgttctgtggattccagaaacacccttaacgatctcctgaagcatctaaat
gacccaaacagtaaccccaaagccatcatgggagaaatccatatggcccatcaaaccctc
atgctggacccagtaggacctatgtctgaggtcccacccaaggtccctaaccgggaggca
tctctgtactcccctccctcaacactccccagaaatagcccaaccaagagagtagatgtc
cccaccactcctggggtcccaatgacatctctggaaagacaaaggggttatcataaaaat
tcctcccagaggcactctatatcagccgtgcctaaaaacttaaactcaccaaatggtgtt
ttgttatccagacagccgagtatgaaccgtggaggatatatgcccactcccaccggggcg
aaggtggactttattcaggggacacctgtgagtgtccatctgcagccttccctctccaga
cagagcagctacaccagtaatggcaccctccccaggacgggactaaagaggacaccatcc
ttaaaacctgatgtgccgccaaagccttcctttgtccctcagaccacgtctgtcaggcca
ctgaacaaatacacttactag
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