Peromyscus maniculatus bairdii (prairie deer mouse): 102910350
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Entry
102910350 CDS
T11302
Name
(RefSeq) DDB1- and CUL4-associated factor 1-like isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
102910350
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pmav01001
]
102910350
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmav04121
]
102910350
Enzymes [BR:
pmav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
102910350
Protein kinases [BR:
pmav01001
]
Serine/threonine kinases: Other
Other
102910350
Ubiquitin system [BR:
pmav04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
102910350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
Beta-prop_WDR3_2nd
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Vps41
PEP5_VPS11_N
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
102910350
NCBI-ProteinID:
XP_076411812
LinkDB
All DBs
Position
20:complement(41647583..41652061)
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AA seq
1458 aa
AA seq
DB search
MTTVVVHVDSKAELTALLEQWEEDHGSGQDMVSILTRMSELIEKETEEYHKGDPDPFVDH
HPGQADPEYMLGHLLRVFSKNDHFMNALVNGYVMTSRELPLNTAACRLLLDLLPGLETAV
VFQEKEGIVENLFKWAQEADQPLRTYSTALLGGAMENQEIAANYRDENSQLVAIVLRRLR
ELQVQEVALRQESKCPSPQKLSSEPRLPLDEEAVNMDYGDMAVDIVNREHGDRENVRRGQ
QKLDFSPSEPDGVFAELSNSSWSEMSPWVIGTNYTLYPMTPTIEQRLLLQYLTPVGEYQE
LLPIFMQLGCRELLMFYMDLKQTNDVLLTFEALKHLASLLIHNKFAIDFVVHGGVQKLLE
IPRPSMAATGVSTCLYYLSSNQDAMERVCMHPYSVLSAVVNYALWLMECSHASGCCHATM
FFSVCFSFRAVLELFHYYDGLRRLVNLISTLEILNLEDQGAHVSDDKILATCQRGKYTCM
ALRKYFEAHLAIKLEQVKQSLQRTEGGILVHSQPPYKACSYTREQIVEMMEFLIEYGPAQ
FYWEPAEIFLKLSCVQLLVQLISISCKWKTYHGRNDTVLFALDVLAILTVVPKIQLQLAE
SVKVLDGHGSTESTVGINIILGVAEGEYFIHDAEIQKSALQVIINCVCGPDNRISSIGKF
TSGTPQRKLFQNPKSSEHILAKMWHVVQSNNGIKVLLSLLSIKMPITDADHIRALACKAL
VGLSRSSTVGQIISKLPLFSSCQIQQLMKEPVLQDKLSNHVKFCNYAAELIERVSGKPLL
VGTDVSLAQLQKAGVVAQSRISFPEKELLLLIRNHLISKGLGETATVLTREADLPMTAAS
HSSAFTPVTAAAFPLSLPWTPRIGNGIAGQLGNHTAVGASAPSACLAEPLPYVAQDSLAL
PGTSYADNSSLIGRTSFIRERPSLCIGRKVQVLQQKSDHGANSQSPAEKTHLDRHLPSPP
TLDSIITEHLREQHARCKNPIATCPPFSLFTPHQCPEPKQRQQAPINFNSRLNSRALLPI
YGGVDGGCFDRHLIFSRFRPISVFREAHEYESGFTCCAFSAQERFLILGTYTGQLKLYNV
FSGQEEASYNCHNSAITHLEPSRDGSFLLTSGTWSQPLSALWGMRSVFDMKHSFTEDHYV
EFSKYSQDQIIGTEEDIAHIYDIETGTKLLTLFNPDLANNYKRNCATFNPTDDLVLNDGV
LWDVRSAQALHKFDKFNRNISGVFHPNGLEVIINTEIWDLRTFHLLHTVPALDQCHVVFN
HTGTVMYGAMLQADDEDDFLEERMRSLFGSSFRTFNATDYKPIATIDVKRNIFDLCTDTK
DCYLAVIENQGSMDAPNMDTVCRLYEVDRQRLAEEEDVEENSEEEELEEEDDDHDDDDTD
DEAVLDSDQWLEAEMEEVDNSENTGQYEDNDFSPSDEDLASLEEVEEGEDEDSDIEEEME
VILVDDSSENSDLEDDII
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgactacagttgtggtacatgtggactccaaagctgagctcactgccctgctggaacag
tgggaagaggaccatggaagtgggcaggatatggtatctatccttaccaggatgtcagaa
ttaattgaaaaagaaactgaagaataccataaaggagatcctgacccatttgttgatcac
catcctggtcaagctgatccagagtatatgctgggccacttgctgagagtattctccaag
aatgatcatttcatgaatgcactggtgaacgggtatgtgatgacaagtagagagctccct
ttaaatactgcagcttgcagactgctactggacctcttgccaggtctagaaactgcagtt
gtctttcaagaaaaggaagggattgtagaaaatcttttcaaatgggcccaagaggctgat
cagccactgaggacatattctacagcactgttaggaggtgctatggaaaatcaagagatt
gctgcaaactatagagatgaaaattcacagctggtggcaatagtgcttcgcagactgaga
gagctacaagttcaggaagtggctttgcggcaggaaagtaagtgtcctagtccacagaag
ctttcatcagagccacgtttgcctctggatgaggaagctgtgaatatggactatggtgac
atggcagtagatattgtgaatagagagcatggtgacagagagaatgttaggagaggccag
cagaagttggatttctcaccttctgagccagatggtgtgtttgctgagctgtctaatagc
agctggtcagaaatgtccccctgggtgattggcaccaattataccctctatccaatgact
cccactattgagcagagacttcttctccagtacctgacccctgtaggagagtatcaggag
ttacttcccatattcatgcaacttggatgccgagaattgttgatgttttatatggatctg
aaacagactaatgatgtcctgcttacttttgaggcactcaagcacctagcatctctcctg
atccataacaaatttgccatagactttgttgtacatggtggagtacagaaactactggaa
attcctcggccttctatggctgcaactggtgtatctacatgcttgtattacctgtcctcc
aaccaggatgctatggaaagagtttgcatgcatccctacagtgttctatctgctgtggtg
aactatgccctatggttgatggaatgttctcatgcttcaggatgctgccatgctacaatg
tttttctcagtttgcttctcattccgggctgtcttggaactctttcactattatgatggt
ctgcgtcgtctagtgaacttgatcagtactttggagattttaaatttggaagaccagggt
gcacatgtgagtgatgataaaatccttgctacctgccaaaggggcaaatatacctgcatg
gctctgcgaaagtattttgaggctcacttggccattaaactggaacaagtcaagcagtca
cttcagaggactgagggtggtattcttgtgcactctcaacctccatacaaggcatgctca
tacactcgtgagcagattgtggaaatgatggagtttttgatagaatatggcccagctcag
ttttattgggaacctgctgaaatcttcctcaagctttcctgtgtgcagctcttggtgcag
cttatttccatctcctgcaagtggaagacctatcatggaaggaatgacactgtgctcttt
gctttggacgtcctggctatcctcactgtggtgccaaaaatccagctccaattggcagag
tcggtgaaggtcttggatggacatggctctactgaatccactgtaggtatcaacatcatt
ttgggagtggctgaaggtgaatactttattcatgatgctgaaattcagaagtcagccctt
caagtaatcatcaattgtgtgtgtggcccagataaccgaatatccagtattggtaaattt
acctctggaactcctcagagaaagctatttcagaaccccaagagcagtgagcatatcctg
gccaaaatgtggcatgtggtccagtccaacaatggcatcaaggtgcttctgtccctattg
tccatcaagatgcccatcacagatgcagaccacatcagggccctggcctgcaaggcccta
gtgggcttgtctcgaagtagcactgttggacagattatcagcaaattgcccctttttagt
agctgccagattcaacagctgatgaaggagccagtgctgcaggacaagcttagcaaccat
gtcaagttctgcaactatgcagctgagctcattgagagagtatcaggaaagcctcttctg
gttggcactgatgtgtccctggcccaactacagaaagcaggtgttgttgcccagtcaagg
atctccttccctgagaaagaactgctcctgttgataagaaaccatctcatttctaaagga
cttggagagacagccactgtgctgaccagagaggctgacctgcccatgactgcagcctca
cattcttctgccttcacccctgtgactgctgctgcttttccactctctcttccctggact
cctcgaattggcaatggcattgctggccaactgggcaaccatacagctgtgggtgcttct
gccccttctgcctgccttgctgaacctctgccttatgtagctcaggattcattggcattg
cctggcacatcatatgcagacaactcctctttaattggcaggaccagttttatcagagag
aggccatcactgtgcattggcaggaaagttcaagtgttgcagcagaagtcagaccatggt
gctaatagccagagccctgctgaaaaaacacacttggatagacatcttccttccccacca
acactggacagtatcatcacagagcatcttagggagcaacatgctcgctgcaagaacccc
attgccacgtgtccacctttttctctctttactcctcaccagtgtcctgagccaaaacag
aggcagcaagctcctatcaactttaactcaaggctcaacagcagggcattgcttccaata
tatggaggagtggatggcggatgctttgataggcacctcatctttagcagatttcgtcct
atttcagtgttcagggaagctcatgaatatgagagtggctttacgtgttgtgcattctca
gcccaggagaggttcctgattcttggtacttatacagggcagttgaaactctacaatgta
tttagtggacaggaagaggccagctacaactgtcacaactcagccatcacacaccttgaa
ccttccagggatgggtccttccttctgacatctggcacttggagccagcctttgtctgca
ctttgggggatgaggtcagtatttgatatgaaacattccttcacagaagatcattatgtt
gagttcagtaagtactctcaggatcagatcataggcacagaagaagacattgcccatatt
tatgatattgagactggcaccaagctgttgactctgtttaacccagatcttgccaacaac
tacaagaggaactgtgccacctttaatcctacagatgaccttgtcttaaatgatggggtg
ctctgggatgtccgctctgcccaggccctccacaagtttgacaagttcaacaggaatatc
agtggtgttttccatcccaatgggctggaggtcatcatcaacacagagatttgggacctg
cgaactttccatcttttacacacagttcctgctctggatcaatgtcatgtggtgtttaac
cacacagggacagtgatgtatggagcaatgttgcaggcagatgatgaagatgacttcttg
gaagagaggatgaggagcctttttgggtcatccttccgaacatttaatgcgactgattat
aagcctatagctactattgatgtgaaacggaacatctttgacctgtgtacagacaccaaa
gattgctatcttgctgtcattgagaatcaaggcagtatggatgcccctaacatggacaca
gtatgcaggctttatgaggtggacaggcagcgtctggcagaggaagaagatgtagaggag
aactctgaagaggaagaactggaggaagaggatgatgatcatgatgatgatgacactgat
gatgaagcagttcttgattctgaccagtggctggaggcagaaatggaggaggttgacaat
agtgagaacacaggacagtatgaggacaatgacttttctccctctgatgaggacctagca
agcctagaggaggtagaagagggcgaagatgaagactctgatatagaggaggaaatggaa
gtgatcctggtggatgacagctcagagaactctgacttggaagatgacatcatctaa
DBGET
integrated database retrieval system
