Peromyscus maniculatus bairdii (prairie deer mouse): 102910565
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Entry
102910565 CDS
T11302
Symbol
Utp20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmav03009
]
102910565 (Utp20)
Ribosome biogenesis [BR:
pmav03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
102910565 (Utp20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
DUF7051
Motif
Other DBs
NCBI-GeneID:
102910565
NCBI-ProteinID:
XP_006979896
Ensembl:
ENSPEMG00000024120
UniProt:
A0A6I9L9V5
LinkDB
All DBs
Position
18:complement(14036453..14122051)
Genome browser
AA seq
2774 aa
AA seq
DB search
MKTKPLSHKTENTYRFLTFAERLGNVNIDIIHRIDRTASYDEEVETYFFEALLKWRELNL
TEHFGKFYKEVIDKCQSFNQLVYHQNEIVQSLKTHLQIRNSFAYQPLLDLVVQLARDLQT
DFYPHFEDFFLTVTSILETQDTELLEWAFTSLSYLYKYLWRLMVKDMAKIYSLYSTLLAH
KKLHIRNFAAESFTFLMRKVSDKNALFNLMFLDLNEHPEKVEGVGQLLFEMCKGVRNMFH
SCAGQALKLILQKLGPVTETETQLPWTLVGETLKNMAKSTAGYIYKEHFGVFFDCLQESL
LELHSKGTETNCRENSEQISRLLETLLILVKHGSGSKITKPPDVCRVLSEALQTASLSTS
CRKTLLDVVSALLLAENVSLPETLIKETIDKIFESKFERRLILDFSEVMFPMKQFEQLFL
PSFLWYIENCFLMGDSVVCDEALAILTKLILKKAPPPTAGSMAIEKYPLVFSQQTVGSYL
KQRKTDPKRRKEQFPVLDHLLSIVQLPPNNDTTYLSRSWAALVVLPHIRPLEKEKVLALV
SCFIESLFMAGDKGSFGKGNLFVLCQAVSTLLSLEESSELLHLVPVERVKNLVLTFPTEP
SVLLLADLYYQRLALCGCKGPLSEKALMELFPKLQTNISTGVSKIRLLTIRILNHFDIRL
PASVEGDGLSERQSAFAVLRQAELVPATVSDYREKLLHLRKLRHDVVQDATPPGPLQEVP
LRYLLGMLYVNFSALWDPVIELVSSHAHGMENKQFWNVCYEHLEKAAAHAEKELQKDRRD
EQPTAGGGWEQSQEGDVGALYQQQLASKTDCRERLDHTNFRFLLWRALAKFPERVEPRSR
ELSPLFLRFINNEYYPADLQVAPTQDLRRKGRGAEAEEVEEEPAVEEDEELEEEAVPTDE
APQKKKTRRAAAKQLIAHLQVFSKFSNPRALYLESKLYELYLQLLLHQDQTVQKIALDCI
MTYKHPHILPYRENLQRLLEDRSFKEEIVHFSISEDSTIVKTAHRADLFPILMRILYGRM
KNKTGSKTQGKSASSTRMAIVLRFLAGTEPGEIHLFLDLLSEPVKHFKNGECHCAVIRAV
EDLDLSKVLPVGRQHGILNSMEVVLKNISHLISEYLPKILQILLCMTATVSHILDQREKI
QLRFINPLKNLRRLGIKMVSDIFLDWESYQFRAEEIDAVFHGAVWPQICRLGSESQYSPT
PLLKLISIWSRNARYFPLLAKQKPGHPECDILTNVFAVLSAKNLSDATASIIMDIVDDLL
SLPDFEPTETVPSLPVTGCVYAEVADNAEPVTVGGRLIVPHVPAILEYLSRSTISAEKVK
KKKNRAQVSKELGILSKISKFMKDKEQSSLLITLLLPFLLRGSVAQDTELDILVTVQNLL
QHCLDPTRFLKPLAKLFSVIKNKLSRQLLCTVFQSLSDFESGLKYITDVVKLNAFDKRHL
DDINFDVRFSAFQTITSTIKEMQTVDADYLVPVMHNCFYNMELGDMSLSDNACMCLTSII
KRLAALNVTEKDYKEIIHRTLLERLRKGLKSQTESVQHDYTLILSCLIQTFPNQLEFKDL
VQLTHYTDPEMDFFENMKHIQIHRRARALKKLARQLLEGQVVLSCKSLQNYIMPYAMTPI
LDEKLLKHENITIAATEVIGAICRHLSWPAYVYYLKHFIHVLQTGQINQKLGVSLLVIVL
EAFHFDYKTLEEQMGSVKNEENTVEMTESLEHEALELEPVDEEEKSSSGGRELLEAAEAA
ESGGAAAVEQECGSKSVSFLPRTREELERTIQTIQGAITGDILPRLHKCLASATKREEEH
KLVKSKVVNEEEVVRVPLAFAMVKLMRSLPREVMEANLPSVLLKVCVLLKNRAQEIRDIA
RSTLTKIIEDLGVHFLQYVLKELQTTLVRGYQVHVLTFTVYTLLQGLSSKLQVGDLDSCL
PIMTEIFNHELFGALAEEKEVKQILSKVMEARRSKSYDSYEILGKFVGKDQVTKLILPLK
EILQNTTSLKLARKVHETLRRIIAGLIVNPDMTAESLLLLSYGLVSENLPLLREKEKKPA
APAPDERLPPQSCLLLPPTPVRGGPKAVVSKKTNMHIFIESGLRLLHLSLKTSKFQSSNE
HVLEMLDPFVSVLINCLGARDVKVITGALQCLIWVLRFPLPSIETKAGQLTKHLFLLLKN
YARLGAARGQNFHLVVNCFKCVTIVVKKVKSYKITEKQLQVLLAYAEEDIYDTTRQATAF
GLLKAILSRKLLVPEIDDIMRKVSKLAISAQNEPARVQCRQVFLKYILDYPLGEKLRPNL
EFMLAQLNYEHETGRESTLEMIAYLFDTFPQGLLHDHCGMFFIPLCLMMVNDDSAMCKKM
ASMAIKSLLSKVSLEKKDWLFDLVTSWFRAKKRLNRQLAALTCGLFVESEGVDFERRLGT
LLPVIEKEIDPENFKDIIEETEEKAADRLLFAFLTLISKLIKECNIIRFTKPSETLNKIW
SHVHSHLRHPHSWVWLTAAQIFGLLFASCQPEELVQKWKSKKKPTEPVAVRFLTSDLDQK
MKSISLASCHQLHSKFLDESLGEQVVKNLLFIAKVLYLLEPDSGNKRGELKDLEDALARE
AAGDEAGADGKMESEREEKEEPSRPATLLWLIQKLSRTAKLEAAYSPRNPLKRTCIFKFL
GAAAVDLGVDRVKPYLPVIIAPLFRELNSTYAEQDPLLKNLSQEIIELLRKLVGLESFSL
AFASVQKQASEKRALRKKRKALEFVTNPDIAAKKKLKKHKNKSEAKKRKIEFLRPGYKAK
RQKSHSLRDLAIVE
NT seq
8325 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccaagccgctttcccacaagacggagaacacctaccggtttcttacatttgct
gaaagactgggcaatgtgaacatcgatattattcaccgtatcgatagaactgcaagctat
gatgaggaggttgaaacctacttcttcgaggctctgctgaagtggagagaactgaacctt
acagagcactttgggaaattttacaaagaagtcattgacaaatgccaatcttttaaccag
ttggtctatcatcaaaacgaaatagttcagagcctgaagactcacctgcaaattaggaac
agttttgcctaccaacctcttttggatttagtagtgcagttggcacgagacctgcagact
gatttctatccacactttgaagacttcttcctgacagtcacctccatcctggagactcag
gacacagagctgttagaatgggctttcacctcgttgtcgtatctttacaagtacctgtgg
agactgatggtgaaggacatggccaagatctacagcttgtacagcaccctcctggctcat
aaaaaactacacataagaaattttgctgccgaaagttttacctttttgatgagaaaggtc
tctgataaaaatgcacttttcaatttaatgtttcttgatcttaatgaacatccagaaaaa
gtggaaggagttggacagttgctctttgaaatgtgcaaaggggtcagaaatatgtttcat
tcctgtgcaggccaggcactgaagctcattttgcaaaaactgggacctgttactgaaaca
gaaactcaactaccatggactttagttggagaaaccctgaaaaacatggccaaatccact
gccggctatatctataaggaacattttggtgtattctttgactgtttgcaagaatcactc
ctggagctacacagcaaagggacagaaacaaactgccgtgaaaactctgaacagatcagt
cggctgctggaaacattgctgatcctcgtcaaacacggaagtgggtcaaaaataacaaag
cctcctgacgtctgtagggtattgtctgaagcattacagacagccagtctttccacatct
tgccggaagaccctcttggatgtggtttctgctttgctcctagctgaaaatgtttccttg
ccagagaccctcatcaaagaaaccatagacaaaatatttgaaagcaaatttgagagacgt
ttgattttggatttttctgaagtcatgtttcctatgaagcagtttgaacagctgtttcta
ccaagctttctctggtacattgagaattgctttttgatgggcgactctgtggtctgcgat
gaagcactggccattttaaccaagctcattctgaaaaaagctcctccgcccactgctggc
tctatggccattgaaaaataccctctggttttctcacaacagactgtgggatcctactta
aagcagaggaagactgaccctaagagaagaaaggaacagtttcccgtattagaccatctc
ctatccatagttcagttacccccaaataatgataccacttacctttcacggtcttgggca
gcccttgtggtattacctcatatcaggcctcttgagaaggagaaggtgctagctctcgtg
tcatgcttcatagagtccctcttcatggctggtgacaaggggagctttgggaaaggaaac
ttatttgttctctgtcaagctgtaagtaccctgctaagtttggaagagtcttctgaactt
cttcatctggttcctgtggagcgggtgaagaatttagtgctaacatttccgacggagcca
tctgtgttgctgttggctgatctctattatcagaggctggccttatgtggatgcaaaggg
ccgctttctgagaaagctttaatggagttatttcccaagttacagacaaacatttcaact
ggtgtctccaagattcggctcttgacaataaggatcctaaatcattttgacatccggctt
ccagcatcagtggagggtgacgggctctcggagcggcagtcggcctttgctgtcctacgc
caggcagagctggtgccggccactgtgagcgactacagagagaagctgctccacctgaga
aagctgaggcacgatgtggtgcaggatgcaacccccccaggaccgctccaggaggtgccg
ctccgttacctgttgggcatgctgtatgtcaacttcagcgccctctgggaccctgtgatt
gagctcgtaagttctcatgcccatggaatggaaaacaagcaattctggaatgtctgctat
gaacatctagagaaagcagctgcacatgctgagaaagaactgcagaaggacaggagagac
gaacagcccactgcgggtggaggctgggagcaaagccaagagggcgacgtgggcgcactt
taccagcagcagttagcatcgaaaaccgactgtcgggaacgactggaccacaccaacttc
cgattcttgctctggcgagctttggccaaatttccagagagagtagagccaaggtccagg
gaactctccccactgttcttgaggttcatcaacaatgagtattatccagctgatctgcaa
gttgctccaacccaggatctacgcagaaaaggcagaggagcagaggctgaggaagtggaa
gaggagcctgctgtggaggaagatgaagagttggaggaagaggcagtgcccacagatgaa
gccccccagaagaagaagacaagaagggccgcagccaagcagttaattgctcatttgcaa
gtcttctctaagttttcgaacccacgggccttgtatctagaatccaaattatatgaacta
tatcttcagttattgctacaccaagatcagacagtgcaaaaaatagccttggattgcata
atgacctacaaacaccctcatatcctcccttacagggagaacttacagaggctgctggag
gacaggagctttaaagaagagatcgtgcatttcagcatttcagaagacagcaccatagtg
aaaactgcacaccgggcagatctgtttccaattctgatgagaattttgtatgggcggatg
aagaataagacagggagtaaaacccaggggaaatccgcttccagcacccgcatggccatt
gtcctgcggttcctcgctgggaccgaacctggagagatccacttgttcttagacctgctg
tctgaacctgtgaagcacttcaaaaacggggagtgccattgtgcagtcattcgggcagta
gaggacttggatttgtctaaggttcttcccgtgggtcgtcagcatggcatcttaaatagc
atggaggttgtattgaagaacatcagtcatctgatcagcgagtaccttccaaagattctg
cagatcttgctgtgtatgacagcgaccgtctcacacatcctcgaccagcgagagaagata
cagctacggtttattaacccactgaaaaatttaagacgtctgggaatcaaaatggtcagt
gatatctttttggattgggaatcctatcagttcagagcagaagaaatcgatgctgtgttt
catggtgcagtctggccccagatctgcaggcttggatctgagagtcaatattcgcctact
cctctgctgaagctaattagtatctggagcagaaatgcaagatatttccctcttctggct
aaacagaaacctggacacccagaatgtgatatcctgaccaatgtctttgcagttctctct
gcaaagaatctgtccgatgccacagccagcattataatggacatagtcgatgaccttctc
agccttccagattttgagcccacagaaacagtgccgagcttgccggttactggctgtgtg
tacgccgaggtggcagacaatgcagagcctgtcaccgtgggagggagactgattgtgcct
catgtgcctgcgattcttgagtatctcagcagaagcacaataagtgcagagaaggtgaaa
aagaagaagaacagggcacaagtcagtaaggagctcggcatcctttccaagataagcaag
tttatgaaggacaaagagcagagttctctcctcattacacttctccttcccttcctcctc
cggggcagtgttgctcaggatacagagcttgatatcctggtgacagtacagaacttgtta
cagcattgtctggaccccacccgcttcctcaaacctctggccaagctcttctcagttatt
aagaacaagctgtcaagacagttgctgtgtaccgttttccagagtctgtctgattttgaa
agtggactaaaatatattacagacgttgtaaagcttaatgcctttgataaaaggcatctc
gatgacatcaactttgacgtccgcttctcagcattccagaccatcacctctaccataaag
gagatgcagacggtggatgctgactacctggtccctgtgatgcataactgcttctataat
atggagttaggagacatgtctttaagtgacaatgcctgcatgtgcttgacaagtatcatc
aaaaggctagctgctttgaacgtcacagagaaagactataaggagatcattcaccgcact
ctcctggagagactgaggaaaggactgaagagccagacagagagtgttcaacatgattat
actctgatcctttcctgtttgattcaaacttttcccaatcaactggaatttaaggacttg
gtgcagctcactcattacactgacccggaaatggacttctttgagaacatgaagcacatt
cagatccacagacgagcgagagccctgaagaagctggccagacaactcctggaagggcag
gttgtactgtcttgtaaatctctccagaattacatcatgccttacgccatgactccaatt
cttgatgagaaactgctcaagcatgaaaacataaccattgctgccaccgaggtgattgga
gctatttgcagacacctgtcttggccagcctatgtgtattacttgaaacatttcattcac
gtcttgcagacaggccagatcaaccagaagctgggggtcagtttgctggtgatagtgttg
gaagcgttccattttgactacaaaactcttgaagaacaaatgggaagtgttaagaatgaa
gaaaacacagttgaaatgactgagtcactggaacatgaagccctggaattggagcccgtg
gatgaggaagagaagagttcgtcgggtggcagggagctgctggaggccgccgaggcagcg
gagtctggtggggcagcagctgtggagcaggagtgcggctcgaagtccgtctctttcctt
ccgcggactcgggaggagttggaaagaaccattcagaccatccagggagccatcacgggg
gacatcctccccaggctccacaagtgcctggcgtctgcgaccaaaagggaagaagagcac
aagctggtcaagtcaaaggtcgtgaatgaggaggaagtggtccgagtccccctggctttt
gccatggtgaagctgatgcggtccctcccacgggaggtgatggaggcaaatctgcccagt
gttttgctgaaggtgtgtgtcctcctcaagaacagagcacaggaaatccgagatattgca
cgcagtactctcaccaaaataatcgaagatctgggtgtgcactttctgcagtatgttctc
aaagaattacagacgacccttgtccgtgggtaccaggtccatgtgctcacgttcaccgtt
tacacattgctgcaaggcctcagcagcaagctgcaagttggggatttagactcttgtcta
ccaataatgactgagatttttaaccatgaattgtttggtgcccttgctgaagaaaaggaa
gtaaagcagattctgtccaaagtcatggaggcgcgaaggagcaagagttacgattcttat
gaaatcctgggcaagtttgtcggaaaagatcaggttacaaaacttattcttccgttaaaa
gagatcctacaaaacaccacgagtttaaaacttgcccggaaagttcacgaaaccttacgc
cgaattatagcaggattaattgtgaatccagacatgactgcagaatctcttctactgctc
agttatggtttggtcagtgaaaatctgccactgctccgagaaaaggaaaaaaagccagca
gcccctgcacctgacgagcggctgccaccccagagctgccttctgctccccccaactcca
gttcgaggtgggccaaaggctgtggtgagcaagaaaaccaacatgcacatcttcatcgag
tctgggcttcggctgctgcatctgagtctaaagacttccaagttccaatcttcgaatgag
catgtgctggaaatgttggacccttttgtgtcggtgctcataaactgcctgggtgccagg
gatgtgaaggtcatcacaggggctttgcagtgcctgatctgggtcttgcggttccctctg
ccctccatagaaacgaaagcagggcagctgacgaagcaccttttcctcttgctgaagaac
tacgcaagactgggggctgcccggggccagaacttccacctggtagtgaattgtttcaag
tgtgtgaccatcgttgtcaagaaggtcaagtcctataagataactgagaaacaacttcag
gttctcctggcatatgccgaggaagacatttatgataccacaagacaagccaccgcattt
ggtcttctcaaggctattttatcaaggaaattattggtcccagaaattgatgatatcatg
cggaaagtatccaagttggcaatttctgcacaaaatgaacctgccagggtacagtgcaga
caggtttttctgaaatacattcttgactatcccctcggtgagaaattgagaccaaacttg
gaattcatgctcgctcaactcaattacgaacatgagactggaagagagtccaccttggaa
atgattgcctatctctttgacaccttccctcagggactgctccatgaccactgcggcatg
ttcttcatccccctttgcctgatgatggtcaacgatgactctgccatgtgcaagaagatg
gcgtccatggccatcaagtccctgctcagcaaggtcagccttgagaagaaggactggctg
tttgatctggtcacctcctggttcagagcaaaaaagcgattaaacaggcagctggctgcc
ctgacctgtggcttatttgtggaaagtgaaggagttgattttgagagaaggcttggaact
cttcttcctgtgattgaaaaggagattgatcctgaaaactttaaagatatcatagaggag
acggaagaaaaggctgcagatcgcctgctctttgcttttctcacactgatcagtaagctc
atcaaggaatgtaacatcattcgctttaccaagccctccgagacgctgaataaaatctgg
agtcacgtacactctcacctcagacatccgcacagctgggtgtggctcacagcagcccag
atttttggattgctctttgcatcttgccaaccagaagagctcgttcaaaaatggaaaagc
aaaaagaaacccacggagcctgtagcagtcaggttcctaacaagcgaccttgaccaaaag
atgaagagcatctctctggcctcatgccatcagctgcattccaaattcttagacgagtcc
ctaggagaacaggttgttaagaacttactgttcatagccaaagtcttgtatttactggaa
cccgattctgggaacaagcgaggagagttgaaagacttggaagatgctctggccagagag
gcggcaggagacgaggctggtgcagatgggaagatggaatctgagagagaagagaaggaa
gaacccagcaggccggccacactgctgtggctgatccagaagctgtcccggacggctaag
ctggaggctgcttactcgccgagaaaccccttaaagaggacctgcatctttaagttcctc
ggtgcggcggccgtggacctcggggtggaccgggtaaagccctacctcccagtgatcatc
gccccgctgttccgggaactcaacagcacctatgcagagcaagatcctctgctgaagaat
ctatcccaggaaatcatagaattactcagaaagctggttggactcgagagcttctccttg
gcctttgcctctgtgcagaagcaggctagtgaaaagagggcgctccggaagaagaggaag
gccctggagtttgtgaccaatcctgatatcgctgccaagaaaaagttgaagaaacataaa
aataaaagtgaagcaaagaaaagaaagatagagttcctgcgcccgggctataaggccaag
agacaaaaatcccacagcctgagagatttagcaatagtggagtga
DBGET
integrated database retrieval system
