Peromyscus maniculatus bairdii (prairie deer mouse): 102910829
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Entry
102910829 CDS
T11302
Symbol
Cop1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X3
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04115
p53 signaling pathway
pmav04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102910829 (Cop1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
102910829 (Cop1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmav04121
]
102910829 (Cop1)
Enzymes [BR:
pmav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102910829 (Cop1)
Ubiquitin system [BR:
pmav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102910829 (Cop1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
102910829 (Cop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
102910829
NCBI-ProteinID:
XP_042114322
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Position
11:68310672..68433951
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AA seq
739 aa
AA seq
DB search
MSGSRQTGSGSAGTSPGSSAASSVTSASSSLSSSPSPPSAAASAAALVSGGAAPAAGSGG
LGGPGRPVLVAAAVSGSGSASTGGAVSAGLSRLSCAARPSAGVGGSSSSLGSSSSSSRKR
PLLAPLCNGIHNSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNNRCPK
CNYVVDNIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDN
LDLANVNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEED
IKRVEEMSGLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPSGFSGTSQTKKQPWYNST
LASRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRPLATLS
YASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSK
ISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASG
SDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPI
MVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNG
DYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALSDGE
SNVLIAANSQGTIKVLELV
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtagccgccagaccggctcgggttccgctgggacgagccccggttcctcggcg
gcctcctcggtgacttccgcctcctcgtccttatcctcgtctccgtcgccgccttccgcg
gcggcctcggcggcggcgctggtctctggcggggcggctccggccgcgggctcgggcggc
ctcggtggcccggggcggcctgtgctagtggcggccgcggtgtccggcagcggcagcgcg
agcaccggcggggcggtgtccgcgggcctgtcccggctcagctgcgcggccaggcccagc
gccggtgttggagggagcagctccagcctgggcagcagcagcagcagcagtaggaagcga
cctctgctcgccccgctctgcaacgggatccacaactcctacgaggacaaaagcaacgac
ttcgtctgccccatctgctttgatatgattgaggaggcatacatgacaaaatgtggccac
agcttttgctacaaatgtattcatcagagtttggaggacaataataatagatgtcccaag
tgtaattatgttgtggacaatattgaccatctctatcctaatttcttggtgaatgagctc
attctcaaacagaagcaaagatttgaggaaaagaggttcaaattggaccactcagtgagt
agcaccaatgggcataggtggcaaatatttcaagatttgctaggaactgatcaggataac
cttgatttggccaatgtcaacctcatgttggaattactagtgcagaagaagaagcaactg
gaagcagaatcacatgcagctcagctacagatccttatggaattcctcaaggttgcaagg
agaaataagagagagcaattggaacagatccagaaggaactgagtgttttggaagaggat
attaaaagagtggaagaaatgagtggcttgtactcccctgtcagtgaagatagcacagtg
cctcaatttgaagctccttctccatcacacagtagtattattgattctacagaatacagc
caaccttcaggtttcagtgggacttctcagacaaagaaacagccttggtataacagcaca
ttagcatcaagacgaaagcgactcactgctcattttgaagacttagagcagtgttatttt
tctacaaggatgtctcgtatctcagatgacagtagaactgcaagccagttagatgaattt
caggaatgcctgtccaagtttactcgatacaactcagtaagaccattggccacattgtca
tatgctagtgatctctataatggttccagcatagtttctagtatcgaatttgaccgggat
tgtgactattttgcaattgctggggttacaaagaagattaaagtctatgaatatggcaca
gtcatccaggatgcagtggatattcattaccctgagaatgaaatgacctgcaattccaaa
atcagctgtatcagttggagtagttaccataagaatctgctagccagcagtgattacgaa
ggcactgtcatactatgggatggattcacaggacagagatcaaaggtctatcaggagcat
gaaaagaggtgttggagtgttgactttaatctgatggatcctaaacttttggcttcaggt
tctgatgatgcaaaagtgaagctgtggtctaccaatttagacaattccgtggcaagcatt
gaggcaaaggctaatgtgtgctgtgtgaaattcagtccctcttccagataccatttggca
tttggctgtgcagatcactgtgttcactactacgatcttcgtaacactaaacagccaata
atggtattcaagggacacagaaaagcagtctcttatgccaagtttgttagtggtgaagaa
attgtctctgcctcaacagacagccaactaaaactgtggaatgtggggaaaccatactgc
ctgcgttccttcaagggtcatattaatgaaaaaaactttgtaggacttgcgtccaatgga
gattatatagcttgtggaagtgagaacaactccctctacttgtactataaaggactttct
aagactttgttgacttttaagtttgatacagtcaagagtgttctggacaaagaccggaaa
gaagatgacacaaatgaatttgtcagtgctgtgtgttggcgggcactatcagatggggag
tctaatgtgctgattgctgctaacagccagggtacaattaaggtgctagaattggtgtga
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