Peromyscus maniculatus bairdii (prairie deer mouse): 102910844
Help
Entry
102910844 CDS
T11302
Symbol
Ss18l1
Name
(RefSeq) calcium-responsive transactivator
KO
K15623
protein SSXT
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03082
ATP-dependent chromatin remodeling
pmav05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102910844 (Ss18l1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
102910844 (Ss18l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmav03036
]
102910844 (Ss18l1)
Chromosome and associated proteins [BR:
pmav03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102910844 (Ss18l1)
GBAF(ncBAF) complex
102910844 (Ss18l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
102910844
NCBI-ProteinID:
XP_006976105
Ensembl:
ENSPEMG00000002000
UniProt:
A0A6I9LB58
LinkDB
All DBs
Position
4:157384485..157408360
Genome browser
AA seq
402 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNMSLGPGALSQSGSSQGLHPQGSLGDAISTGLPPASLMQ
GQIGNGPNHVSMQQTAQSTLPTTSMSMSGSGHGTGPGYSHSGPTSQSVPMQGQGAISNYV
SRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQAPIAMMGQGGQGSSMMGQRPMAP
YRPSQQGSSQQYLGQEEYYSEQYSHSQGAAEPMSQQYYPDGHGDYAYQQSSYTEQSYDRS
FEDSTQHYYEGGNSQYSQQQTGYQQGSAQQQTYSQQQYPNQQSYPGQQQGYGPAQGAPSQ
YSSYQQGQGQQYGSYRASQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggccttcgcgtcggcgcggccgagaggcaaaggggaggtcacacagcagacc
atccagaagatgctggatgagaaccaccatctgatccagtgcatcctggactaccagagc
aagggcaagacggccgagtgcactcagtaccagcagatcctgcaccggaacctggtctac
ctggccacgatagcagactccaaccagaatatgcagtcgctgcttcctgcgccaccaaca
cagaacatgagcctgggcccgggagcgctgagccagagcggttccagccagggcctgcac
ccccagggcagcctcggcgacgccatcagcacaggcctgccccctgcctccctcatgcag
ggccagatcggtaacggtccaaaccacgtgtccatgcaacagacggcccagagcacactg
cccacaacctccatgagcatgtcaggcagcggtcatggtactgggcctggctacagccac
tcgggacccacctcacagagcgttcccatgcaaggccaaggtgccatcagcaactatgta
tctcggaccaacatcaacatgcagtccaacccagtctccatgatgcaccagcaggcagcc
acgtcccactacaactcggcacagggcgggagccagcattaccagggccaggcgcccatt
gccatgatgggccagggtggccaagggagcagcatgatgggacagcggcccatggcgccc
taccgaccctcccagcaaggctcttcccagcagtacctaggccaggaggagtactacagt
gaacagtacagccacagccagggtgctgcagagcccatgagtcagcagtactacccagac
ggccacggcgactacgcctaccagcagtcgtcctacacagagcagagctacgaccgctcg
tttgaggactccacacagcactactatgaggggggaaactcccagtacagtcagcaacag
actgggtaccagcagggctcagcgcagcagcagacctactcccagcaacagtaccccaac
cagcagagctacccgggccagcagcaaggctacggccctgcccagggagccccctcacag
tactcgagctaccagcaaggccaaggtcaacagtatggaagctacagagcatcgcagacg
ggaccttctgcccagcagcagcggccttacggctatgagcaggggcagtatggaaattac
cagcaataa
DBGET
integrated database retrieval system
