Peromyscus maniculatus bairdii (prairie deer mouse): 102910979
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Entry
102910979 CDS
T11302
Symbol
Dcaf1
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
102910979 (Dcaf1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pmav01001
]
102910979 (Dcaf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmav04121
]
102910979 (Dcaf1)
Enzymes [BR:
pmav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
102910979 (Dcaf1)
Protein kinases [BR:
pmav01001
]
Serine/threonine kinases: Other
Other
102910979 (Dcaf1)
Ubiquitin system [BR:
pmav04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
102910979 (Dcaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
102910979
NCBI-ProteinID:
XP_076431590
Ensembl:
ENSPEMG00000019209
LinkDB
All DBs
Position
7:104813718..104890130
Genome browser
AA seq
1531 aa
AA seq
DB search
MKKSCPFGQAMTTVVVHVDSKAELTTLLEQWEKDHGSGQDMVPILTRMSELIEKETEEYR
KGDPDPFDDRHPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLL
DIMPGLETAVVFQEKEGIVENLFKWAREADQPLRTYSTGLLGGAMENQDIAANYRDENSQ
LVAIVLRRLRELQLQEVALRQENKRPSPRKLSSEPLLPLDEEAVDMDYGDMAVDVVDGEQ
EASRDMDISFRLDSSHKTSSRVNSATKPEEASGFKKNKSTKHGDRENFRKAKQKLGFSSS
DPDRVFVELSNSSWSEMSPWVIGTNYTLYPMTPAIEQRLILQYLTPLGEYQELLPIFMQL
GSRELMMFYIDLKQTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAA
TGVSMCLYYLSYNQDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSF
RAVLELFDRYDGLRRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRKYFEA
HLAIKLEQVKQSLQRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEV
FLKLSCVQLLLQLISIACNWKTYYARNDTVRFALDVLAILTVVPKIQLQLAESVDVLDEA
GSTISTVGISIILGVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRK
LSQTPKSSEHTLAKMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSST
VRQIISKLPLFSSCQIQQLMKEPVLQDKRSDHVKFCKYAAELIERVSGKPLLIGTDVSLA
RLQKADVVAQSRISFPEKELLLLIRNHLISKGLGETATVLTREADLPMTAASHSSAFTPV
TAAASPVSLPRTPRIANGIASRLGSHAAVGASAPSAPPAHPPPRPPQGSLALPGPSYAGN
SPLIGRISFIRERPSPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITE
YLREQHARCKNPVATCPPFSLFTPHQCPEPKQRRQAPINFTSRLNRRASFPKYGGVDGGC
FDRHLIFSRFRPISVFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEAS
YNCHNSAITHLEPSRDGSLLLTSATWSQPLSALWGMKSVFDMKHSFTEDHYVEFSKHSQD
RVIGTKGDIAHIYDIQTGNKLLTLFNPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSAQ
AIHKFDKFNMNISGVFHPNGLEVIINTEIWDLRTFHLLHTVPALDQCRVVFNHTGTVMYG
AMLQADDEDDLLEERMKSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIE
NQGSMDALNMDTVCRLYEVGRQRLAEDEDEEEDQKRMVSPHQLHPWPEEEEEQEEEDDDE
DDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFSPSDEELANLLEEGEEGEDEDS
DADEEVELILGDTDSSDNSDLEDDIILSLNE
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagagctgtcccttcggccaagccatgactacggtagtggtgcatgtggactcc
aaagctgagctcactaccctgctggagcagtgggaaaaggaccatggcagtgggcaggat
atggtacctatccttaccaggatgtcagaattaattgaaaaagaaactgaagaatatcgt
aaaggagatccagacccatttgatgatcgacatcctggtcgagctgatccagagtgtatg
ctgggccacttgctgagaatactcttcaagaatgatgatttcatgaatgcactggtgaat
gcgtatgtgatgacaagtagagagccccctttaaatactgcagcttgcagactgctactg
gacatcatgccaggtctagaaactgccgttgtctttcaagaaaaggaaggaattgttgaa
aatcttttcaaatgggcccgagaggctgatcagccactgaggacatattctactggactg
ttaggaggtgctatggaaaatcaagatattgctgccaactacagagatgaaaattcacag
ctggtggcaatagtgcttcgcagactgagagagctacaacttcaggaagtggctttgcgc
caggaaaataagcgtcctagtcctcggaagctttcatcggagccacttttgcctctggat
gaggaagctgtggatatggactatggtgacatggcagtagatgttgtggatggagagcaa
gaagcttctagagatatggacatctcctttcgattggattcaagtcacaagaccagtagt
agagtgaactcagcaactaagcctgaggaagcctcaggattcaagaagaacaagtctaca
aagcatggtgacagagagaactttaggaaggccaagcagaagttgggtttctcatcttct
gacccagatcgtgtgtttgttgagctgtctaatagcagctggtcagaaatgtccccctgg
gtgattggcaccaattataccctctatcctatgactcctgctattgaacagcgacttatt
ctccagtatctgacccctctaggagagtatcaggagttacttcccatattcatgcaactt
ggatcacgagaattgatgatgttttatattgatctgaaacagactaatgatgtcctgctt
acttttgaggcactcaagcatctagcatctctcctgctccataacaaatttgctacagaa
tttgttgcacatggtggagttcagaaattactggaaattcctcgtccttctatggccgca
actggtgtatccatgtgcttgtattacctgtcctacaaccaggatgctatggagagagtt
tgcatgcatccccacaatgttctatctgacgtggtgaactataccctatggttgatggaa
tgttctcatgcttcaggatgctgccacgctacaatgtttttctcaatttgcttctcattc
cgggctgtcttggagctctttgaccgttatgatggtctgcgtcgcctagtgaacttgatc
agtactttggagattttaaatttggaagaccagggtgcacttttgagtgatgatgaaata
tttgctagccgccaaactggcaaacatacctgcatggctctgcgaaagtattttgaagct
cacttggccattaaattggaacaagtcaagcagtcacttcagaggactgagggtggtatt
cttgtgcaccctcaacctccatacaaggcatgctcatacactcatgagcagattgtggaa
atgatggagtttttgatagaatatggcccagctcagctgtattgggaacctgctgaagtc
ttcctcaagctttcctgtgtacagctcttattgcagcttatttccatcgcctgtaattgg
aagacctattatgcaaggaatgacactgtgcgctttgctttggatgtcctggctattctc
actgtggtgccaaaaatccagctccagttggcagagtcagtggatgtcctggatgaggct
ggctctactatatccactgtaggtatcagcattattttgggagtggctgagggtgagttc
tttatccatgatgctgaaattcagaagtcagcacttcaaattatcatcaattgtgtatgt
ggcccagataaccgaatatccagtattggtaaatttatttctggaactcctcggagaaag
ctgtctcagacccccaagagcagtgagcataccctggccaagatgtggaatgtggtccag
tccaacaatggtatcaaggtgcttctgtccctattgtccatcaagatgcccatcacagat
gcagaccagatccgggccctggcctgcaaggccctagtgggcttatctcgaagtagcact
gttcgacagatcatcagcaaattgcccctttttagtagctgccagattcaacagctgatg
aaggagccagtgctgcaggacaagcgtagcgaccatgtcaagttctgcaaatacgccgct
gagctcattgagcgagtatcaggaaagcctcttctcattggcactgatgtgtcgctggca
cggctacagaaagccgatgttgttgcccagtcacggatctccttccctgagaaagaactg
ctcctgttgatacggaaccatctcatttctaaagggcttggagagacagcgactgtgctg
accagagaggctgacttgcccatgactgcagcctcacactcttctgccttcaccccagtg
actgctgctgcttctcctgtctctcttccccggacccctcggattgccaatggcattgca
agtcgactaggcagccatgctgctgtgggtgcttctgccccttctgccccccctgcccat
cctccgccacgccccccccagggttcattggctctgcctggcccatcatatgcaggcaac
tcccctttgattggtaggatcagttttatcagggagaggccatcaccatgcaatggcagg
aaaattcgagtgttgcggcagaagtcggaccacggcgcatacagccagagccctgccata
aaaaaacaattggatagacatcttccttccccacctacgctggacagtatcatcacagag
tatcttagggagcaacatgctcgctgcaagaaccccgttgccacctgtccacctttttct
ctctttactcctcaccagtgtcctgagccaaaacagaggcggcaagcgccaataaacttt
acctcaaggctaaaccgcagggcatcatttccaaaatatggaggggtagatggcggatgc
tttgataggcaccttatttttagcagatttcgtcctatttccgtgttccgggaagctaat
gaagacgagagtggctttacgtgttgtgcattctcagcccgggagcggttcctgatgctc
ggtacctgtacagggcagctgaagctctacaatgtattcagtggacaggaagaggccagc
tacaactgtcacaactcagccatcacacaccttgaaccttccagggatgggtcattactt
ctgacatctgccacttggagccagcctttgtctgcactttgggggatgaagtcagtattt
gatatgaagcattccttcacagaagatcattatgttgagttcagtaagcattctcaggat
cgggtcataggcacaaaaggagacattgcccatatttatgatattcagactggcaacaag
ctgttgactctatttaacccagatcttgccaacaactacaagaggaactgtgccaccttt
aatcctacagatgatcttgtcttaaatgatggcgtcctctgggatgtccgctctgcacag
gccatccacaagtttgacaagttcaacatgaatatcagtggtgttttccatccaaatggg
ctggaggtcatcatcaatacagagatttgggaccttcgaactttccatcttttacacaca
gttcctgctctggatcaatgtcgtgtggtgtttaaccacactgggacagtgatgtatgga
gcaatgttgcaggcagatgatgaagatgacttattggaagagaggatgaaaagccctttt
gggtcatccttccgaacatttaatgcaactgattataagcctatagcaactattgatgtg
aaacggaacatctttgacctgtgtacagacaccaaagattgttatcttgctgtcattgag
aatcaaggcagtatggatgccctgaacatggacacagtatgcaggctttatgaagtgggc
aggcagcgtctggcagaggatgaagatgaagaggaggaccagaagcggatggtgagtcca
caccaactgcacccctggccagaggaagaggaagaacaggaggaagaggatgatgatgaa
gatgatgacgacaccgatgatttagatgaacttgacactgaccagttgctggaggcagaa
ctggaggaggacgacaacaatgagaacgcaggagaggatggggacaatgacttctctccc
tctgatgaggagctagcgaaccttctagaggagggagaggagggggaagatgaagactct
gatgcagatgaggaagtggaactgatcctgggcgacacagacagctcggacaactctgat
ttggaagatgacatcatcttatctctgaatgagtga
DBGET
integrated database retrieval system
