Peromyscus maniculatus bairdii (prairie deer mouse): 102911009
Help
Entry
102911009 CDS
T11302
Symbol
Cpt1c
Name
(RefSeq) palmitoyl thioesterase CPT1C isoform X1
KO
K19524
carnitine O-palmitoyltransferase 1, brain isoform [EC:
2.3.1.21
]
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav00071
Fatty acid degradation
pmav01212
Fatty acid metabolism
pmav03320
PPAR signaling pathway
pmav04148
Efferocytosis
pmav04152
AMPK signaling pathway
pmav04714
Thermogenesis
pmav04920
Adipocytokine signaling pathway
pmav04922
Glucagon signaling pathway
pmav04936
Alcoholic liver disease
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
102911009 (Cpt1c)
09130 Environmental Information Processing
09132 Signal transduction
04152 AMPK signaling pathway
102911009 (Cpt1c)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102911009 (Cpt1c)
09150 Organismal Systems
09152 Endocrine system
04922 Glucagon signaling pathway
102911009 (Cpt1c)
04920 Adipocytokine signaling pathway
102911009 (Cpt1c)
03320 PPAR signaling pathway
102911009 (Cpt1c)
09159 Environmental adaptation
04714 Thermogenesis
102911009 (Cpt1c)
09160 Human Diseases
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
102911009 (Cpt1c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pmav03029
]
102911009 (Cpt1c)
Enzymes [BR:
pmav01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
102911009 (Cpt1c)
Mitochondrial biogenesis [BR:
pmav03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
102911009 (Cpt1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
Motif
Other DBs
NCBI-GeneID:
102911009
NCBI-ProteinID:
XP_042130539
Ensembl:
ENSPEMG00000013161
LinkDB
All DBs
Position
1:37098484..37113846
Genome browser
AA seq
803 aa
AA seq
DB search
MAEAHQASSLLSSLSSDGAEVELSSPVWQEIYLSGLRSWKRHLWRVWNDFLTGAVPASPF
SWLFLFSAIQLAWFLQLDPSLGLMDKIKELLPDWGGQHYQLQGLLAGALFASCLWGALIF
TLHVALRLLLSHHGWLLEPHGTMSSPTKTWLALVRIFSGRHPRLFSFQRALPRQPVPTAQ
ESVRKYLESVRPVLGDDAFDRAAALASDFLRLQAPRLQLYLRLKSWCASNYVSDWWEEFV
YLRSRGSLMVNSTYYMMQDFLYVTPTPLQAARAGNAVHALLLYRHLLNQQEIPPTLLMGM
RPLCSAQFERIFNTTRVPGVEKDYLRHLQDSRHVAVFHRGRFFRVGTHSSNGLLSPRALE
QQFQEILDDPSPACPLEEHLAALTAAPRSMWAQVRESVKTHAAAALEAVEGAAFFVSLDS
EPAGLTREDPAASLDAYAHALLAGRGHDRWFDKSFTLIVFSNGKLGLSVEHSWADCPVSG
HMWEFTLATECFQLGYAADGHCKGQPDPALPQPQRLQWDLPEEIHPSISLALRGAKTLSG
NVDCHVFPFSHFGKSFIKRCHVSSDSFIQLVLQLAHFRDRGQFCLTYESAMSRLFLEGRT
ETVRSCTREACHFVRAMEDKEKTDQQCLALFRVAVDKHQALLKAAMSGQGIDRHLFALYI
TSRLLHMQSPFLTQVQSQQWPLSTSQIPVQQMHLFDVHDYPDYVSSGGGFGPATDHGYGI
SYIFMGENMITFHISSKKSSTKTDSHRLGQHIEDALLDVASLFQAGQHLKCRFRGLGENS
GCRRGFLSSKTVDPRVPTTSANF
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggcacaccaggcctccagcttgctgtcttcactgagctccgatggggcagaa
gtagagctcagctccccggtgtggcaggagatttacctctctggcctgcgctcctggaaa
aggcatctctggcgtgtctggaatgacttcctcactggtgcggtccccgcgagccccttc
agctggctcttcctcttcagtgccatccagctcgcgtggttcctccagctggatccttcc
ctaggactgatggataagataaaagagttgcttccagactggggcggacaacactatcag
ctccaggggctcctggcaggagcactctttgcctcgtgtttgtggggagccctgatcttt
acacttcatgtggctctgcggctgctcctgtcccaccatggctggcttctggaacctcat
ggcaccatgtcctcgcccacgaagacctggctggcactggtccgaatcttctccgggagg
cacccaaggctgttcagcttccagcgtgcgctcccgcggcagccagtgcccacggcgcag
gagtccgtacgcaagtacctggagtcggtgcgcccggtgcttggagacgacgctttcgac
cgtgctgcggctctggcgagcgacttcctgaggctgcaggcgccacggctgcagctctat
ctgcgcctcaagtcctggtgtgcttccaactacgtgagtgactggtgggaagagtttgtg
tacctgcgctcccgaggctcactgatggttaacagcacctactacatgatgcaggatttc
ctgtatgtcacccccacaccgctgcaggccgccagggcaggcaatgccgtccacgctctc
ctcctgtatcgccaccttctgaaccagcaggagatcccaccgacgttgctgatggggatg
cgacccctgtgttctgcccagttcgagaggatattcaacactacccgggtcccaggggtg
gaaaaagactacctccgtcacctccaggacagccggcacgtggctgtcttccaccggggc
cgattcttccgtgtagggacccactcttccaatggcctgctatccccacgggccctcgag
cagcagttccaggagatcctggatgacccctccccagcctgtccccttgaggagcatcta
gcagctctgaccgctgctcccaggagtatgtgggcccaggttcgggagtcggtgaagacc
catgctgccgctgccctggaggctgtggaaggggccgccttctttgtgtccctggattct
gagcccgcgggactgaccagggaggaccctgcagcttccctggatgcctatgcccatgcc
ctgctggctggccgaggccatgaccgctggtttgacaaatccttcaccctcatcgtcttc
tccaatgggaagctgggtctcagcgtggaacactcctgggctgactgccctgtctcggga
catatgtgggagttcacgctggccacagaatgcttccagttgggatatgcagcagacggc
cactgtaaggggcagcctgaccccgctctgccccagccccagcgcctgcagtgggacctt
ccagaagagatccatccgtccatctctctggccctgaggggagccaagaccttgtctggt
aacgtcgactgccacgtcttccccttttcccacttcggcaagagcttcatcaaacgttgt
cacgtctcttcagacagtttcatccaactggtcctgcagctggcccacttccgggacagg
ggtcagttctgcctgacttatgagtcagccatgagccgactgttcctggaaggcaggaca
gagactgtgaggtcttgtactagagaggcctgtcactttgtgagagccatggaagacaag
gagaagacagaccaacagtgccttgccctgttccgggtggccgtggacaagcaccaggct
ctgctgaaggcggccatgagtgggcaggggatcgaccgccacctcttcgcactctacatc
acgtctcgattgctccatatgcagtcgcccttcctgacccaggtccagtcacagcagtgg
ccgctgtccaccagccagatcccggtacagcagatgcacctgtttgacgtccacgattat
ccagattatgtttcctctggaggtggatttgggcctgccactgaccatggctacggcatc
tcctatatcttcatgggggaaaacatgatcaccttccacatctccagcaagaaatcaagc
acaaaaacagactcgcaccggctgggccagcacatcgaggatgcactgctggatgtagcc
tccctgttccaggccggtcagcatctcaagtgccggttcaggggccttggggagaactcg
ggctgtaggcgtggctttctctccagtaagactgtggaccccagggtccccacaacctcc
gccaacttttga
DBGET
integrated database retrieval system
