Peromyscus maniculatus bairdii (prairie deer mouse): 102911086
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Entry
102911086 CDS
T11302
Symbol
Dnajc6
Name
(RefSeq) auxilin isoform X3
KO
K09526
DnaJ homolog subfamily C member 6
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102911086 (Dnajc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmav03041
]
102911086 (Dnajc6)
03110 Chaperones and folding catalysts [BR:
pmav03110
]
102911086 (Dnajc6)
04131 Membrane trafficking [BR:
pmav04131
]
102911086 (Dnajc6)
Spliceosome [BR:
pmav03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102911086 (Dnajc6)
Chaperones and folding catalysts [BR:
pmav03110
]
Heat shock proteins
HSP40 / DNAJ
102911086 (Dnajc6)
Membrane trafficking [BR:
pmav04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
102911086 (Dnajc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTEN_C2
DnaJ
Y_phosphatase
Motif
Other DBs
NCBI-GeneID:
102911086
NCBI-ProteinID:
XP_006998082
Ensembl:
ENSPEMG00000010017
UniProt:
A0A6I9M916
LinkDB
All DBs
Position
2:122135969..122300758
Genome browser
AA seq
967 aa
AA seq
DB search
MSLLGSYRKKTSSDGYESLQLVDSHGDSSARGAAAGTQRVTAGAARSPARQPPHRASTTD
SSGASSPDMEPSYGGGLFDMVKGGAGRLFSNLKDNLKDTLKDTSSRVIQSVSSYTKGDLD
FTYVTSRIIVMSFPLDNVDIGFRNQVDDIRSFLDSRHLDHYTVYNLSPKSYRTAKFHSRV
SECSWPIRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAMFIFCNLY
STPGPAVRLLYAKRPGIGLSPSHRRYLGYMCDLLADKPYRPHFKPLTIKAITVSPIPFFN
KQRNGCRPYCDVLIGETKIYSTCTDFERMKEYRVQDGKIFIPLNITAQGDVIVSMYHLRS
TIGSRLQAKVTNTQIFQLQFHSGFIPLDTTVLKFTKPELDACDVPEKYPQLFQVTLDIEV
QPQDKVIDLTPPWEHYCTKDVNPSILFSSQQEHQDTLALGGQAPADLPPDHPRNLGQGGF
FASLCWQDQKSEKSFCEEDHAALVNQESEQSDDELLTLSSPHGNANGDRPHGAKKPSKEQ
EPAAPPPPEEVDLLGLEGSDVSTNFSPLAAPPSNSELLSDLFGGGGATGPAQAGQAGVED
VFHPSGPASAQSTPRRAAASASASPTLRVGEGTTFDPFGAPAKPAGQDLLGSFLNTSSAS
SDPFLQPTRSPSPTVHASSTPAVNIQPDVAGGWDWHAKPGGFGMGSKSAASSPTGSSHGT
PTHQSKPQTLDPFADLGTLGSSSFASKPTTPTGLGGGFPPLSSPQKASPQPMGGGWQQPA
GYNWQQAQPKPPSSMPHSSPQNRPNYNVSFSAMPAGQSERGKGSTNLEGKQKAADFEDLL
SSQGFNAHKDKKGPRTIAEMRKEEMAKEMDPEKLKILEWIEGKERNIRALLSTMHTVLWA
GETKWKPVGMADLVTPEQVKKVYRRAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFEN
QGQKPLY
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcctcgggagctaccggaaaaagaccagcagcgatggttatgaatctttgcag
ctggtggacagtcacggggactcgagtgcgcggggcgcggcggctggcacgcagagggtg
accgcgggtgcggcgcgcagtcccgcccggcagcctccgcaccgcgccagcaccacggac
agctcaggtgcctcatctccagacatggagcccagctatgggggaggcctttttgacatg
gtaaaaggtggtgcagggaggctattcagtaatctgaaggacaacctgaaggacaccctc
aaagacacatcctctcgagtcatccagtctgttagcagctacacaaagggagacctagac
ttcacttacgtcacctccagaattatcgtgatgtcctttcctctggacaacgttgacata
ggattcaggaatcaggttgatgacatccgtagctttttggattccagacatctcgaccac
tacacagtatacaacctgtcacccaagtcttaccgaactgccaagtttcacagccgggtc
tcggaatgcagctggcccatcaggcaggccccgagtctacacaacctgtttgctgtgtgt
cggaatatgtataactggctgctacagaatcccaaaaatgtctgcgttgtccactgcttg
gatggacgggctgcgtcttcaattctggttggtgctatgttcattttctgtaatctctac
tccactcctggccctgctgttcgattgctctacgcaaagcgaccgggaattggactgtcc
ccgtcccacaggaggtacttgggctacatgtgcgacctacttgcagacaaaccctaccgc
cctcacttcaagccactgacgatcaaggcaatcactgtcagcccaattcccttcttcaat
aagcagagaaatgggtgtcgcccatactgtgacgtactgatcggagaaactaaaatatat
tcaacatgcacagattttgaacgaatgaaagagtaccgtgtccaagatgggaaaatcttc
atccccctgaacatcacagcccaaggcgatgtcattgtgtccatgtaccacctgcggtca
accattgggagccggctgcaggctaaggtgaccaacacacagatattccagctccagttt
cattctggatttataccactggacacaacggttttaaagttcactaagcctgagttggat
gcatgtgatgtaccagaaaaatatcctcagctgttccaagtgacactggatatagaagta
cagccccaagacaaagtgatcgacttaactccaccatgggagcactattgcacaaaggat
gtgaaccccagcatcctcttctcctctcagcaggaacatcaggatactctggccttagga
ggtcaggctccagcagatctccctccagaccatcccaggaatcttgggcaaggtggcttc
tttgcctccctctgttggcaagatcagaaatcagagaagtcgttctgtgaggaggaccac
gctgccctggtgaatcaggaaagtgagcagtcggacgatgaactactgaccctctcaagc
ccacacggaaatgccaacggggacaggcctcacggagccaagaagcccagcaaggagcag
gagccagcggcccctcctcctccggaagaagtggaccttctgggcctggaagggtctgat
gtgagcacgaacttctctccgctggcagctcctcccagcaattctgaactgctgagtgac
ctgtttgggggtggaggtgccacaggtcctgcccaggcggggcaggctggggtagaagac
gtgtttcatcccagtggacctgcgtctgcgcagtccacaccacgccgcgctgccgcctcc
gcctctgcttcgccaaccctaagagtgggagaaggtaccacctttgacccttttggagcc
cctgctaagccagcgggtcaggatttgctgggctcctttctgaacacgtccagtgcttct
agcgacccctttctgcagcccacgagaagtccttcccctacagtgcatgcttccagcaca
cctgctgtgaacatccagccagatgttgctggaggttgggactggcatgccaaaccaggg
ggttttggaatgggaagcaagtcagctgccagcagcccgacaggctcatcacatggcacc
cctacccatcagagcaagccccagactctggatcccttcgccgacctcggcacactgggt
agctcttcatttgccagcaaacccaccacaccaacgggattaggtggaggatttccaccc
ctcagctcaccacagaaagcatccccccagccaatgggtggagggtggcagcagccggcc
ggctacaactggcagcaggcgcagcctaagccaccgtccagtatgcctcactcctccccc
cagaaccgacccaattacaacgtgagcttctcagctatgcctgctggacagagtgaacgt
ggcaaaggatctaccaacttggaagggaagcaaaaggctgctgactttgaagacctgctt
tctagtcaaggtttcaacgcccacaaagacaagaaggggcctcgaacaatagctgagatg
agaaaggaggaaatggctaaggaaatggaccccgagaaattaaagatcctggaatggata
gaaggcaaagagagaaacatcagagccctgctgtccacgatgcacactgtgctgtgggcc
ggggagaccaagtggaagcccgtgggcatggcagacctggtgacgccagagcaagtgaag
aaagtgtacaggagggctgtgttggtggtgcacccggacaaggctactgggcaaccctat
gaacaatatgcaaagatgattttcatggagctaaatgatgcctggtctgaatttgaaaac
caaggccagaagcccttgtattaa
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