Peromyscus maniculatus bairdii (prairie deer mouse): 102911420
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Entry
102911420 CDS
T11302
Symbol
Vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04137
Mitophagy - animal
pmav04141
Protein processing in endoplasmic reticulum
pmav05014
Amyotrophic lateral sclerosis
pmav05022
Pathways of neurodegeneration - multiple diseases
pmav05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102911420 (Vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
102911420 (Vcp)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
102911420 (Vcp)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102911420 (Vcp)
05022 Pathways of neurodegeneration - multiple diseases
102911420 (Vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmav03019
]
102911420 (Vcp)
03009 Ribosome biogenesis [BR:
pmav03009
]
102911420 (Vcp)
04131 Membrane trafficking [BR:
pmav04131
]
102911420 (Vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmav04147
]
102911420 (Vcp)
Messenger RNA biogenesis [BR:
pmav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
102911420 (Vcp)
Ribosome biogenesis [BR:
pmav03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
102911420 (Vcp)
Membrane trafficking [BR:
pmav04131
]
SNARE
SNARE associated proteins
Others
102911420 (Vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
102911420 (Vcp)
Exosome [BR:
pmav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102911420 (Vcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
102911420
NCBI-ProteinID:
XP_076420176
Ensembl:
ENSPEMG00000017364
LinkDB
All DBs
Position
2:complement(67187565..67205313)
Genome browser
AA seq
806 aa
AA seq
DB search
MASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGSGGGTGGSVYTEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctctggagccgattcaaaaggcgatgatttatcaacagccattctcaaacaaaag
aaccgtcccaatcggttaattgttgatgaagccatcaatgaagataatagtgtggtgtcc
ttgtcccagcccaagatggatgaactgcagttattccgaggtgacacagtgttgctaaaa
ggaaagaagagacgggaagctgtgtgcattgtactttctgatgacacatgttctgatgag
aagattcgaatgaatagagttgttcggaataacctccgggttcgcctaggggatgtcatc
agcatccagccatgccctgatgtaaagtatggcaaacgtatccacgtgctacccatcgat
gacacggtggaaggcatcactggcaatctctttgaggtataccttaagccgtacttcctg
gaagcttatcgacccatccggaaaggagatattttccttgtccggggtggcatgcgtgct
gtggagttcaaagtggtagagacagatcccagtccttactgtattgttgctccagacaca
gtgatccactgtgaaggggagccaatcaagcgagaggatgaggaagagtccttgaatgaa
gtaggctatgatgacatcggtggctgcaggaagcagctagctcagataaaggagatggtg
gaactgccactgagacatcctgcactctttaaggcaattggtgtaaagcctcctcgggga
atcttgctatatggacctcctgggacagggaaaaccctgattgcccgagctgtggcaaat
gaaactggagccttcttcttcctgatcaatggtcctgagatcatgagcaaattggctggc
gagtcagagagcaaccttcgtaaagcctttgaggaagctgaaaagaatgctcctgctatc
atcttcattgatgagcttgacgccattgcacccaaaagagagaaaactcatggggaagtg
gaacgtcgtatcgtgtctcagttgttgacccttatggatggcctaaagcagagagcacac
gtgatagttatggcagcaaccaatagacccaatagcatcgacccggccctacggcgattt
ggtcgctttgacagagaggtagatattggaattcctgatgctacaggacgcttggaaatt
cttcagatccataccaagaacatgaaactggcagatgatgtggacttggaacaggtagcc
aatgagactcatggccatgtgggtgctgatttggcagctctgtgttcagaggctgctcta
caggccatccggaaaaaaatggacctcattgaccttgaggatgagaccattgatgctgag
gtcatgaattccttggcagttactatggatgacttccggtgggccttgagtcaaagcaat
ccatcagcacttcgggaaactgtggtagaggtgccacaagtaacctgggaagacattgga
ggcctggaggatgtcaaacgggagcttcaggagctggttcagtatcctgtggagcatcca
gacaaattcctcaaatttggcatgactccttccaaaggtgttctcttctatggacctcct
ggttgtgggaagaccttgctggccaaagccattgctaatgaatgccaagctaactttatc
tccatcaagggccctgaactgctcaccatgtggtttggggaatctgaggccaatgtcaga
gaaatttttgacaaggcacggcaagctgccccttgcgtactcttctttgatgagttagat
tcaattgccaaggctcgtggtggtaatattggagatggtggtggagctgctgaccgagtc
atcaatcagatcctgacagaaatggatggcatgtccaccaaaaagaatgtgtttatcatt
ggagctaccaaccggcctgatatcattgatcctgctatcctaagacctggccgtcttgat
cagctcatctatatcccacttcctgatgagaagtcccgtgttgccatcctaaaagctaac
ctgcgcaagtccccagttgccaaggatgtggatttggagttcctggctaagatgactaat
ggcttttctggagctgatctgacagagatttgccagcgtgcttgcaaactggccattcgt
gaatctattgagagtgagattaggcgagaacgagagaggcagacaaatccatcagctatg
gaagtagaagaggatgatccagtgcctgagatccgcagagatcactttgaagaagccatg
cgctttgcccgtcgttctgtcagtgataatgacattcggaagtatgaaatgttcgcccag
acacttcagcagagtcgaggttttggcagcttcagattcccttcagggaaccagggtgga
gctggccccagccagggcagtggaggaggcacaggtggcagtgtgtacacagaagacaat
gatgatgacctgtatggctaa
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