Peromyscus maniculatus bairdii (prairie deer mouse): 102911565
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Entry
102911565 CDS
T11302
Symbol
Ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
102911565 (Ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmav03036
]
102911565 (Ercc6)
03400 DNA repair and recombination proteins [BR:
pmav03400
]
102911565 (Ercc6)
Chromosome and associated proteins [BR:
pmav03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
102911565 (Ercc6)
DNA repair and recombination proteins [BR:
pmav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
102911565 (Ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
102911565
NCBI-ProteinID:
XP_006976785
Ensembl:
ENSPEMG00000014738
UniProt:
A0A6I9L546
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All DBs
Position
9:9002152..9086777
Genome browser
AA seq
1479 aa
AA seq
DB search
MPHDEVPNSPQPQEQDCSLSQHASANEDMLVGQESGGDSEAGECLSASCEYGPSTSAEAC
VLAATRRGPALLHIDRHQIPSVEPSAQALELQGLGVDVYDQAILEQGVLQQVDSAMHEAS
RGAQFADAEKDYQSVLDDLMSCTTSLRQINKIIEQLSPQAATNRDVNRKLDSVKRQKYNK
EQQLKKITAKQKRLQAILGGAGVQVELDQASLEEEDTEAGPSCLGSMLMPAQEAAWEELI
RTGQMTPFGTPAPQKPEKKPRKIMLNEVSGFEKYLADQAQLSFERKKRTANKKAARKAVV
IAESSAGPNETKPDQSRQVLSQADKRLKKHMRKLQKRALQFQGKVGLPWGKKGLEPAVRP
EAEGDTEGEESGSFPTDGEEEEEQEEEEAVANLSSDDISYELKPLRKGRKYQKKVPVHEV
DDDFFPSSGEEDEAMEGRGGGRKVARCRDDGDEDYYKQRLRRWNKLRLQDKEKRLKLEED
SEESDAEFDEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAF
LAGLSYSKIRTRGSNYRFEGLGPTLIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYAH
KKEKLIRDIVHCHGVLITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQF
RTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVK
TAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEV
YRILNGENQIFSGLVALRKICNHPDLFSGGPKNLSGLPEDELEEDQFGYWKRSGKMIVVE
SLLKIWHKQGQRVLLFSQSRQMLHILEVFLRAHKYSYLKMDGTTTIASRQPLITRYNEDT
SIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTA
GTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLSSPDASQSTETSAIFAGT
GSDVQTPKCHLKNKTPPAPGTNAKCKKLPISDTSANGALLTEEKSEAMGSAGSAPSTESG
PVQGDCLPSGSGTSSVAFGEETGAGSTLEQLSAMSEDGKRSDCPVVYQTSGPSGEASASE
KQGPSSKGECCQVQTGPALVSEQTEGHFCKHKSKRKHDAAKEETPEKCLPKQKAKNSKHC
RDAKFEGTRVPHLVKKRRYRQQNPEQEGAAKERSSDDYVLEKLFKKSVGVHSVVKHDAIM
DGTNPDYVLVEAEASRVAQDALKALKFSRQQCLGAASGVPTWTGHRGSSGAPAGMKNRFG
KKRNSNLPVQRPSSSLTEKSQNNVKREGKAPAPKHFSGKEDGASLSGAPSSSALLARMRA
RNHLILPERLESDNGHLPEATTLPPSSTEHDDLLVEMRNFIAFQAQVDGQASTQEILQEF
ESKLSAAQSCVFRELLRNLCSFHRTPGGEGIWKLKPEYC
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatgacgaagtccccaactcacctcaacctcaggagcaagactgttcactaagt
cagcatgccagtgctaatgaagacatgctggttgggcaggagagtggaggggactcagag
gctggggagtgcctctctgcttcctgtgagtacgggccatccacatcggctgaagcttgt
gtgttggcagccacaaggcgagggccagccctgctgcacattgaccggcatcagatcccc
tcggtggagcccagtgctcaggccctggagctgcagggcctgggtgtggatgtctatgac
caggccatcctggaacagggtgtgcttcagcaggtggacagtgccatgcacgaggccagc
cgtggggcccagttcgcggatgccgagaaggattatcagtcagtcctggatgacctcatg
tcgtgtacaacatccctgagacaaatcaataaaattatagagcaacttagccctcaagct
gccaccaacagagatgtcaacaggaaactagattctgtaaaacgtcagaagtataacaag
gaacaacagctaaagaagataactgcaaaacagaaacgtctccaggccatccttggaggg
gccggggtccaagtagaactggatcaagccagcctggaggaggaagacacagaggcgggg
ccatcatgtcttggcagtatgctcatgcccgcccaggaggctgcctgggaagaactgatc
cgcactggccagatgacaccatttggtaccccagcccctcagaaaccggagaaaaagcct
agaaagataatgctcaatgaagtatcaggctttgaaaaatatttggcagaccaggcacaa
ctgtcttttgaaaggaagaaacgaactgctaacaaaaaagcagctagaaaggctgtggtc
atagctgagtcaagcgcaggacccaatgagaccaaaccggaccagagccgccaagtcctc
tcccaagcagataagcgcttgaagaagcatatgaggaagctccagaagagggcgctgcag
ttccaagggaaagtgggattgccatgggggaagaaaggtctggagcctgctgtgaggcca
gaggctgagggagacaccgagggggaggagtctgggtcctttcccactgatggggaagag
gaagaagagcaagaggaggaggaagcggtggccaacctgtcttctgatgacatcagctat
gaactgaagcctctgcggaagggccggaaataccagaagaaagtcccagtgcatgaggtt
gatgatgactttttcccaagttcgggggaagaagatgaagccatggaaggaagaggagga
ggtcgcaaggtagcgaggtgccgagatgacggcgatgaagactattataagcagcggtta
aggagatggaataaactgaggctgcaggacaaagagaaacgcctgaagcttgaagaggat
tctgaggagagcgatgccgaattcgatgagggtttcaaagtgccaggttttctgttcaaa
aagctctttaagtatcagcagacaggtgttaggtggctgtgggaattgcactgccagcag
gcaggaggaattctgggagatgaaatgggattgggcaagaccatccagataattgccttc
ttggcaggtctgagctacagcaagatcaggactcgcggttcaaattacaggttcgaggga
ctgggccccactctaattgtttgcccaacgacagtgatgcatcagtgggtgaaagaattc
cacacgtggtggcctccattccgagtggcaattctgcacgaaacaggctcctatgcccac
aaaaaggagaagctgatccgagatattgttcattgtcatggagttttgataacctcttat
tcctacatccgactgatgcaagatgacattagcagacatgactggcactatgtgatctta
gatgagggacacaaaattcgaaatccaaatgctgcagtcacccttgcttgcaaacagttc
cgcacgcctcatcggatcatcttgtctggttcaccaatgcagaacaacctccgagagctg
tggtcactcttcgacttcatcttcccgggaaagctaggcacattgcctgtgtttatggag
cagttctctgtccccatcactatggggggctattccaatgcttccccagtacaggttaaa
actgcctataagtgtgcatgtgtcttaagagacaccattaacccctacctactgcggaga
atgaaatcagatgtcaagatgagcctttctttgccagataaaaatgaacaggtcttattt
tgtcgtctaactgatgagcagcataaagtctaccagaatttcattgattccaaggaagtt
tacaggattcttaatggagagaatcagattttctctggacttgtagctctgaggaagatc
tgcaaccaccctgacctcttttctgggggtcccaagaatctcagtggtcttccagaagac
gagctagaggaagatcagtttggttactggaaacgttctgggaaaatgattgtggttgag
tctttgctgaaaatatggcataagcagggtcagcgagtgctgctgttctcccagtcaagg
cagatgctgcacatactggaagtgttcctgagagcccacaagtattcctatctcaaaatg
gatgggaccaccaccatagcatcaagacagccactgattacaagatacaacgaggacacg
tccatcttcgtctttcttctgaccacacgggtgggtggcataggagtgaacctgaccggg
gccaacagagtcatcatctacgaccctgactggaacccaagcaccgacacacaggcccgg
gagcgagcatggaggataggtcagaagaagcaggtgactgtctacaggcttctgacggct
ggcaccattgaggaaaagatctaccaccgacaaatcttcaagcaatttttgacaaacaga
gtgctaaaagacccaaaacaaaggcgcttcttcaaatccaatgacctttacgagctgttt
actctgagtagtcctgacgcatcccagagcacggaaacaagtgctatttttgcaggaaca
ggctccgatgttcagacacccaaatgccatttaaaaaacaagactccaccagccccagga
acaaatgccaaatgcaagaagcttcccatttctgacacatctgcaaatggtgccctcctg
actgaggagaagtctgaggcgatggggtctgcaggaagtgcaccttccacagaaagtggc
cctgtgcagggcgactgtctcccgagtgggagtggaactagcagtgttgcctttggagaa
gagacaggtgcagggtccaccctggagcagctgtcagcgatgagcgaagatgggaagcgt
tcagattgtccagtagtctaccaaacatccgggccatccggtgaggcgagcgccagtgag
aagcagggtccttcctccaaaggggaatgctgccaggttcagacaggacctgctctcgtg
agtgaacagacagaaggtcatttttgtaagcacaaatcaaaaaggaaacacgatgcagca
aaggaagagaccccagagaaatgtctgcccaagcaaaaggccaagaactccaagcactgc
agagatgccaagtttgagggaactcgagttccacacctggtgaagaaaaggcgataccgc
cagcagaaccctgagcaggagggcgcggccaaggagcgaagcagtgatgactatgtcttg
gaaaagcttttcaaaaaatcagtgggcgtgcacagcgtcgtgaagcatgatgccatcatg
gatgggaccaacccggattatgtgctggtggaggcagaagccagccgagtggctcaggat
gccttgaaagctctcaagttctctcgccagcagtgcctgggggcagcatctggtgtcccc
acctggactggccacaggggtagttctggtgcaccagcaggaatgaagaataggtttggt
aagaagaggaactccaacctccctgtgcagcgtccttcttcatcactaacagaaaagtct
cagaacaatgtgaaaagggaggggaaagctcccgcccccaagcactttagcggtaaagaa
gacggagcgtctttgtcgggagcccccagttcctccgcactcttggccagaatgcgagcc
agaaaccacctcatcctgccggagcgcctggagagtgacaacgggcacctccctgaggcc
actaccttgcctccctccagcacagaacatgacgaccttctggtagagatgaggaacttc
attgctttccaggcccaggtggatggccaggccagcactcaggagatcctacaggagttc
gaatccaagttgtctgcggcacagtcctgtgtcttccgagaactactgagaaatctgtgc
agtttccatagaactccgggtggtgaagggatctggaaactgaagccagaatactgctga
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integrated database retrieval system
