Peromyscus maniculatus bairdii (prairie deer mouse): 102911772
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Entry
102911772 CDS
T11302
Symbol
Myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
102911772 (Myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmav03019
]
102911772 (Myo5b)
04131 Membrane trafficking [BR:
pmav04131
]
102911772 (Myo5b)
03029 Mitochondrial biogenesis [BR:
pmav03029
]
102911772 (Myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmav04812
]
102911772 (Myo5b)
Messenger RNA biogenesis [BR:
pmav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
102911772 (Myo5b)
mRNA cycle factors
P-body specific factors
102911772 (Myo5b)
Membrane trafficking [BR:
pmav04131
]
Others
Actin-binding proteins
Myosins
102911772 (Myo5b)
Mitochondrial biogenesis [BR:
pmav03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
102911772 (Myo5b)
Cytoskeleton proteins [BR:
pmav04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
102911772 (Myo5b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
nSTAND3
Myosin_N
AAA_22
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
102911772
NCBI-ProteinID:
XP_015848143
Ensembl:
ENSPEMG00000020539
LinkDB
All DBs
Position
19:65795358..66105000
Genome browser
AA seq
1849 aa
AA seq
DB search
MSYSELYTRYTRVWIPDPDEVWRSAELTQDYKEGDKSLQLRLEDDTIREYPIDVQNNQLP
FLRNPDILVGENDLTALSHLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIYG
QDVIYAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYF
ATVGGSASDTNIEEKVLASSPIMEAIGNAKTTRNDNSSRFGKFIEIGFDKKYHIIGANMR
TYLLEKSRVVFQADDERNYHIFYQLCAAASLPEFKELALTCAEDFFYTSHGGNTAIEGVD
DAEDFEKTRQALTLLGVRESHQISIFKIIASILHLGSVEIQSERDGDSCSIPPQDEHLSN
FCRLLGVEHSQMEHWLCHRKLVTTSETYVKTMSLQQVVNARDALAKHIYAQLFSWIVEHI
NKALHSSLKQHTFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFKLEQEEYMK
EQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYERHSNSQHFQK
PRMSNTAFIVVHFADKVEYLSDGFLEKNRDTVYEEQINILKASKFSLVADLFHDDKDSVP
ATNTAKSRSSSKINIRSSRPPLKVSNKEHKKSVGYQFRTSLNLLMETLNATTPHYVRCIK
PNDEKLPFHFDPKRAVQQLRACGVLETIRISAAGYPSRWTYHDFFNRYRVLMKKRELANT
DKKSICKSVLESLIKDPDKFQFGRTKIFFRAGQVAYLEKLRADKFREATIMIQKTVRGWL
QKVKYRRLKAATLTLQRFYRGHLARRLAEHLRRTRAAIVFQKQYRMQRARLAYRRVCWAA
VIIQSFTRAMFVRRNYRQVLKEHKATIIQKYARGWMARRHFQQQRDAAIVIQCAFRRLKA
KQELKALKIEARSAEHLKRLNVGMENKVVQLQRKIDDQNKEFKTLTEQLSAVTSTHAMEV
EKLKRELAHYQQNQEADASLQLQEEVQSLRTELQKAQSERRVLEDAHSRENGELRKRVAD
LEHENALLKDEKEHLNNQILRQSKAESSQSSVEENLLMKKELEEERSRYQNLVKEYSRLE
QRYENLRDEVTIVKQTPGHRKNPSNQSSLESDSNYPSISTSEIGDTEDALQQVEEIGAEK
AAMDMTVFLKLQKRVRELEQERKKLQVQLEKEQQDSKKVQMEQQNNGIDVDQDADLAYNS
LKRQELESENKKLKNDLNELRKAVADQAMQDNSTPSSPDSYSLLLNQLKLANEELEVRKE
EVLILRTQIMNADQRRLAGKHMEPNINARTSWPNSEKHVDQEDAIEAYHGVCQTNSQTED
WGYLNEDGELGLAYQGLKQVARLLEAQLQAQSLEHEEEVERLKAQVEALKEEMDKQQQTF
CQTLLLSPEAQVEFGVQQEITRLTNENLDFKELVEKLEKNERKLKKQLKIYMKKVQDLEA
AQALAQSDRRHHELTRQVTVQRKEKDFQGMLEYHKEDEALLIRNLVTDLKPQMLSGTVPC
LPAYILYMCIRHADYTNDDLKVHSLLSSTINGIKKVLKKHNDDFEMTSFWLSNTCRFLHC
LKQYSGDEGFMTQNTPKQNEHCLKNFDLTEYRQVLSDLSIQIYQQLIKIAEGLLQPMIVS
AMLENESIQGLSGVRPTGYRKRTSSMVDGENSYCLEAIIRQMNSFHTVMCDQGLDPEIIL
QVFKQLFYMINAVTLNNLLLRKDACSWSTGMQLRYNISQLEEWLRGKNLHQSGAVQTMEP
LIQAAQLLQLKKKTHEDAEAICSLCTSLSTQQIVKILNLYTPLNEFEERVTVSFIRTIQA
QLQERNDPQQLLLDSKHMFPVLFPFNPSSLTMDSIHIPACLNLEFLNEV
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacagcgagctctacacccggtacacgagggtctggatccctgacccagatgaa
gtgtggcgctcggctgaactaacccaggactacaaagagggggacaagagcctgcagctg
agactggaagatgacacaattcgggaatacccaatcgatgtccaaaataaccagttgccg
ttcttacggaatccagacatcttagtaggagaaaatgacctcactgcactcagccatctc
catgagcctgcagttctgcataacttaaaggtccgtttcctggagtccaaccacatctat
acttactgtggtattgtgctggtcgccatcaatccatacgagcagctgcccatctatgga
caagatgtcatttatgcctacagtggccaaaatatgggtgacatggacccccacatcttt
gctgtggcagaagaagcctataagcagatggccagggatgaaaagaaccaatccatcata
gtcagcggagagtctggagcagggaagacggtgtcggccaagtatgccatgcgctatttt
gccacggttggtggctcagccagtgacaccaacattgaggagaaggtcctggcatccagt
cccatcatggaggccattgggaatgccaagaccactcgcaatgacaatagcagccgcttt
gggaagttcattgagattggctttgataaaaagtaccacatcatcggggccaacatgagg
acctacttgctggagaagtccagggtggtctttcaggcggatgatgagaggaattaccac
atcttttaccagctctgcgcggctgccagccttcctgaatttaaagagctcgctctaaca
tgtgcagaggacttcttctacacgtcccatggaggaaacacagccatcgagggtgtcgat
gatgcagaggactttgagaagacccgacaagccctcacactccttggagtgcgggagtcc
catcaaataagcatctttaagataattgcttccatcttgcaccttgggagtgtggagatt
cagtccgagcgtgatggagattcctgcagcataccaccccaggacgaacacttgagcaac
ttctgccgcctgctgggagtggagcacagtcagatggagcactggctgtgccatcgcaag
ctggtcaccacctcggagacctacgtcaagaccatgtccctgcagcaggtggtcaatgcc
cgcgatgccctggccaagcacatctacgcccagctgttctcctggattgtggagcacatc
aacaaggccctgcactcctccctgaagcagcacaccttcatcggggtcctggacatctac
gggtttgagaccttcgagattaacagcttcgagcagttttgtatcaactacgccaatgaa
aagctccagcaacagttcaattcgcatgtgttcaagctggagcaagaagaatacatgaag
gagcagatcccgtggaccttgattgacttttatgataaccagccttgcatagacctcata
gaagcaaagctgggcatcctggacctgttggatgaagagtgtaaggtccccaaaggaact
gatcagaactgggcccagaagctctacgaacgacactccaacagccagcacttccagaaa
ccacgcatgtccaacacagccttcattgtcgtccactttgcagacaaggtggagtacctt
tcagatggttttctggagaaaaatagggatacggtatatgaagaacagatcaacatcctg
aaggccagcaagttctcactagtggctgacttattccatgacgacaaggactctgttcct
gccaccaacacagcgaagagtcgatcgtcttcgaagatcaacattcgctcttccagaccg
cccttgaaggtctccaacaaggagcacaagaaatccgtgggctaccagttccgcacttcc
ctgaacctgctcatggagaccctgaatgccacaacgccacactacgtccgatgcatcaag
cccaatgatgaaaagctccccttccacttcgacccaaagagagccgtgcagcagctcaga
gcctgtggagtattggagaccattcggatcagcgcagccggctacccatccaggtggacc
taccatgacttcttcaaccggtatcgagtgttgatgaagaagagagagcttgccaacacc
gacaagaagagtatctgcaagtccgtcctggagagtctcatcaaggacccagacaagttc
cagtttggccgcaccaagatcttcttccgggcaggccaggtggcctacctggagaagctt
cgtgccgacaagttccgggaagccactatcatgatccagaagactgtcaggggctggctg
cagaaagtcaagtaccgtaggctgaaggcagccaccttaaccctgcagaggttctacaga
ggacacctggcccgcaggctggccgagcacctgcggagaacccgtgcagccatagtgttc
cagaagcagtaccggatgcagagggcccgcctggcctaccggagagtctgctgggctgcg
gtcatcatccagtccttcacccgggccatgtttgtgcggagaaactaccgccaggtcctc
aaggagcacaaagccaccatcatccagaagtatgcccggggctggatggcacgcagacac
ttccagcagcagcgggacgccgccattgtcatccagtgtgccttccggaggctcaaggcc
aagcaggagctgaaggctctcaagattgaggcccgctctgcagagcatttgaaacgcctc
aatgtgggcatggagaacaaagtggtccagctgcagcggaagatcgatgaccagaacaaa
gagttcaagactctgacagagcaattgtcggcagtcacctccacacatgccatggaggtg
gagaagctgaagagggagctggcacattaccagcagaaccaggaggccgatgccagcctg
cagctgcaggaggaggtgcagagcctgcgcactgagctacagaaggctcagtcggagcgc
agggtcctagaggatgcccacagcagggagaatggcgagctgagaaagcgagttgcagac
ctggaacatgaaaatgctctcttgaaggacgagaaggagcaccttaataaccaaatcctg
cgccaatcaaaagctgaatcttcccagagctctgtagaggagaacctcctgatgaagaag
gagctggaggaggagaggtccaggtaccagaacctcgtgaaggaatactcccggctggag
cagagatatgagaacctgcgagatgaggtgaccatcgtaaagcaaactccgggccacagg
aagaacccgtcaaatcaaagtagcttggaatctgattccaattacccctccatttccact
tctgagattggagacactgaggatgcccttcagcaggtggaggagatcggtgcagagaag
gcagcgatggacatgaccgtcttcctgaagctgcagaagagagtgcgggaacttgagcag
gagaggaagaagctgcaggtgcagctagaaaaggagcagcaggacagcaagaaagttcag
atggagcaacaaaacaatggcatcgatgtggaccaggatgccgacctggcctacaacagt
ctgaagagacaagagcttgagtcggagaacaagaagctgaagaacgacctgaatgagctg
aggaaagctgtcgccgaccaagccatgcaggacaactccacccccagctccccagacagc
tacagccttctgctgaaccagctcaagctggccaatgaggagcttgaggtccgcaaagag
gaggtgctgatcctcaggacccagatcatgaatgctgaccagcgccgactggctggcaag
cacatggaaccgaacatcaacgccagaacaagttggcccaacagtgagaaacatgtggac
caggaagatgccattgaggcctatcacggggtctgccagacaaacagccagactgaggac
tggggatatttgaatgaagatggagaactcggcttggcttaccaaggcctaaagcaagtt
gccaggttactggaggcccagctgcaggcccagagcctggagcatgaggaagaggtggag
cgtctcaaggctcaggtggaggccctgaaagaggagatggacaagcagcagcagaccttc
tgccagaccctgctgctctccccagaggcccaggtggagtttggggtccagcaggagata
actcggctgaccaatgagaacctggattttaaagaattggtagaaaagctggagaagaat
gagaggaagctgaaaaagcagctgaagatttacatgaagaaggtccaggacttagaagct
gcccaggcattggcccagagtgacaggaggcaccatgaactcacaagacaggtcacagtc
cagcgcaaagagaaagacttccaaggcatgctggagtaccacaaagaggacgaggccctc
ctcatccggaacctggtgacagacctgaagccccagatgctgtcgggtaccgtgccctgc
ctgcctgcatacatcctctacatgtgcatcaggcatgcagattacaccaacgacgacctc
aaggtacactcgctgctgagttccaccatcaacggcattaagaaagtcctcaagaagcac
aatgacgactttgagatgacgtcattctggttgtccaacacctgccgcttcctccactgt
ctgaagcagtacagtggggatgagggcttcatgacgcagaacactccaaagcagaatgag
cactgtctcaagaactttgacctcactgaatatcggcaggtgctaagcgacctttccatt
cagatctatcagcagctcattaaaatcgcagagggcctgttacaacctatgatcgtttcg
gccatgttggaaaatgagagtatccaggggctgtctggcgtgcggccaacgggttaccgg
aagcgcacctccagcatggtggatggagagaactcctactgcctggaggctatcatccgc
cagatgaattcgtttcatacagtcatgtgtgaccagggcctggaccctgagatcatcctt
caggtgttcaaacagctcttctacatgatcaacgccgtgacccttaacaacctgctcctg
cggaaagatgcctgctcctggagcacaggcatgcagctcaggtacaacataagccaactt
gaagagtggcttcgaggaaaaaaccttcaccagagtggagcagttcagaccatggaacct
ttgatccaggcagcccagctcctccagttgaagaagaaaacccatgaggatgcagaggcc
atctgctctctgtgtacctccctcagcacccagcagatcgtcaagattttaaacctttac
acccccctgaatgaatttgaggaacgagtgacagtgtcctttatacgaacaatccaggct
cagctacaagagaggaatgacccccagcagctactgctggactccaaacacatgtttcct
gttctgtttccttttaatccgtcttctctgaccatggactcaatccacatcccggcatgc
ctcaatctggagtttctcaatgaagtctga
DBGET
integrated database retrieval system
