Peromyscus maniculatus bairdii (prairie deer mouse): 102912231
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Entry
102912231 CDS
T11302
Symbol
Ppfia1
Name
(RefSeq) liprin-alpha-1 isoform X1
KO
K26226
liprin-alpha
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102912231 (Ppfia1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmav04131
]
102912231 (Ppfia1)
Membrane trafficking [BR:
pmav04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
102912231 (Ppfia1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
102912231
NCBI-ProteinID:
XP_076412094
Ensembl:
ENSPEMG00000009542
LinkDB
All DBs
Position
1:complement(155053724..155142480)
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AA seq
1266 aa
AA seq
DB search
MMCEVMPTISEAEGPPGGGGSHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQET
LALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNN
TRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRE
RLRVALERCSLLEEELGATHKELMILKEQNNQKKTLTDGMLDRNHEQENTPSTNGKRSSD
GSLSHEDLAKVLELQEVIDRQAREQSQMKERLASLSSHAAELEEDLDTARKDLIKSEEMN
TKLQRDVREAMAQKEDMEERITTLEKRYLAAQREATSVHDLNDKLENEIANKDSMHRQTE
DKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVAALSKSGPLSSGSSAAKEAKLL
ELTSKLRKAEERHGNIEERLRQMEAQLEEKNQELQRARQREKMNEEHNKRLSDTVDKLLS
ESNERLQLHLKERMAALEDKNSLLREVENAKKQLEETQHDKDQLVLNIEALRAELDQMRL
RGPSLHHGRPHLGSIPDFRFPVADGHVDAYSTSAVLRRPQKGRLAALRDEPSKVQTLNEQ
DWERAQQASVLANVAQAFESDVDVSDGEDDRETLLSSVDLLSPSGQADAQTLAMMLQEQL
DAINKEIRLIQEEKENTEQRAEEIESRVGSGSLDNLGRFRSMSSIPPYPASSLAGSSPPG
SGRSTPRRVPHSPAREVDRLGVMTLPSDLRKHRRQLPASREEVRDDKTTIKCETSPPSSP
RPLRLDRLHKGALHTVSHEDIRDLRNSTGSQDGPVSNPSSSNSSQDSLHKAPKKKGIKSS
IGRLFGKKEKGRPGPLGKESPGQAGVSEIENSSQDALGLSKLGGQAEKTRKLQKKHELLE
EARRQGLPFAQWDGPTVVVWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGIS
NPLHRLKLRLAIQEIMSLTSPSAPPTSRTTTGNVWLTHEEMETLTATPQTEDEEGSWAQT
LAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRGQLKMVDSFHRNS
FQCGIMCLRRLNYDRKELERKREESQNETRDVLVWSNDRVIRWILSIGLKEYANNLIESG
VHGALLALDETFDFSALALLLQIPTQNTQARAVLEREFNNLLVTGTDRRFDEDDDKSFRR
APSWRKKFRPKDIRGLASGSAETLPANFRVTSSMSSPSMQPKKVQMDGSVSGAQRLDSAT
VRTYSC
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgccgaccattagtgaagcagaaggccccccaggaggaggtggg
agccatgggtcaggctccccttcacagccagacgctgattcacattttgagcagctcatg
gtctctatgctggaggaacgagaccgccttctggacacactgagagagacacaagaaaca
ttggcgttaacccaggggaaattgcacgaggttggtcatgaaagagattccttgcagagg
cagctcaacactgcacttccacaggagtttgctgcgctcacaaaggaactcaacgtgtgt
agggagcagcttctggagagggaggaggaaatcgctgagctgaaggcagagaggaacaac
accaggctgctgctggagcacctagagtgcctagtctccaggcacgagcgctctctgcgg
atgacagtggtgaagaggcaggcacagtcgcctgcaggcgtgtccagcgaggtggaggtg
ctgaaagcactcaagtcactgtttgagcaccacaaagccttggatgagaaggtacgagag
cgactccgagtagccttggagaggtgcagcttgttagaggaggagctgggtgctacccac
aaagagctaatgattcttaaagaacagaataatcagaagaaaacactaacagatggaatg
cttgacagaaaccatgaacaggaaaacacaccaagcaccaacggcaagagatcttctgac
ggctccttgagccatgaggatcttgccaaagtgctggagctgcaggaagtcatagacagg
caggcgagagagcagagccagatgaaggagcgcctggcctccctgtccagtcacgcagca
gagctggaggaggatctggacacagctagaaaagacctcatcaagtctgaagagatgaac
acgaaactgcagcgagatgtccgcgaagcgatggcccagaaggaggatatggaggagaga
atcaccacccttgagaaacgctacctcgcagcacaacgtgaagccacgtctgtgcatgac
ctcaatgacaaacttgaaaatgaaattgcaaataaagactccatgcaccgacagacggaa
gataagaaccgacagttgcaagagcgattggagttggcagagcaaaagctgcagcagacc
ctgcgaaaagctgagacactgccagaggtggaggctgagctggcccagagggtggctgca
ctctccaagtctggtcctttgtcttctgggagttctgctgctaaggaagctaaactgttg
gagcttacttccaagcttaggaaggccgaggagagacatggcaacattgaagagaggctg
cggcagatggaggcacagctggaggagaagaatcaggagctgcagcgggcaaggcagaga
gaaaagatgaacgaggaacataataagcgcctgtctgacactgtggacaagctgctctcg
gagtccaatgagaggctgcagctgcatctgaaggagagaatggcggcgctggaggacaag
aattctttactgcgggaagtcgaaaatgcaaagaagcaactggaagagacgcagcatgat
aaggaccaacttgtcctgaatattgaagctctgagggccgagttggaccagatgagactg
agaggcccttcacttcatcacggccgaccccatttgggcagcatcccggacttcaggttc
cctgtggcagacgggcatgtggatgcttacagcaccagtgcagtgttgcggcgcccccag
aagggccggctggcggcgctgcgggacgagccctccaaggtgcagaccctcaacgaacag
gattgggaacgggcccaacaagccagcgtcttggcaaatgtggcacaggcatttgagagt
gatgtggatgtgtctgacggtgaagatgacagagaaactctgctcagctcagttgatctg
ctgtcacccagtgggcaagctgatgcacagacactggccatgatgcttcaggagcagctg
gatgccatcaacaaagagatcaggctgatacaagaagagaaggagaatacagagcagcgg
gcagaggagatcgagagcagagtgggcagtggaagcttggacaatcttggtcgttttaga
tcaatgagctctatccccccctaccctgcttcctcgcttgctggctcttctcctccaggc
agtggtcggtccacaccgagaagggtccctcacagtcctgcccgggaggtggacaggctg
ggtgtcatgactctgcctagtgacttaaggaagcaccggagacagttgccagcttccaga
gaagaggtacgagacgacaagacgacgataaaatgtgaaacctctcccccctcctccccg
aggcccctgcgcttagacaggctgcacaaaggcgcactgcacacggtcagccatgaggac
atcagggacctgaggaactccacaggctcccaggacggtcctgtgagcaaccctagcagc
agtaatagtagccaggactccctccacaaagccccaaagaagaagggcatcaagtcctcc
attggccgtttgtttggcaagaaggaaaagggccggcctggaccactgggcaaggagtca
ccaggacaagctggtgtttcagagatagaaaattcatctcaagatgccttgggactcagc
aaactgggaggacaagctgagaaaacccggaaacttcagaaaaagcatgagctgctggag
gaggcccgcaggcaaggtttgcctttcgcacagtgggatgggcccacggtggtggtgtgg
ctggagctctgggttgggatgcctgcatggtatgtggctgcttgccgagcaaacgtcaag
agtggcgccatcatgtcggccctgtcagacaccgagatccagcgggagattggcatcagc
aaccccctgcacaggctgaagctgcggctggccatccaggagatcatgtcactgactagc
ccttctgccccacccacatccaggacgaccacaggaaatgtctggttgacacatgaagag
atggaaacgctcacagccacgccgcaaacggaagacgaggagggaagctgggctcagacg
ctagcatatggggacatgaaccacgagtggatcggcaatgagtggctgcccagcctgggt
ctgccgcagtaccgcagctacttcatggagtgccttgtagatgcccggatgctggatcac
ctgaccaagaaagacctgcgagggcagctgaagatggtcgacagcttccacagaaacagt
ttccagtgtggaattatgtgcctgagaaggttgaattatgaccgaaaagaactggaaaga
aaaagagaagagagtcagaatgagacaagagatgtgcttgtttggagcaatgaccgggtg
attcgctggatcctgtcgattggccttaaagagtatgccaacaatctaatagagagtggt
gttcacggagcacttctagccttggacgagactttcgatttcagcgccctggcactgttg
ttacaaatcccaacgcagaatacacaggctcgagctgtcttggaaagagagttcaacaac
cttttggtcacggggactgataggaggtttgatgaggacgatgacaaaagtttcaggaga
gcaccttcatggaggaagaagttcagaccaaaggacatccgaggcctggcctctggctct
gcagagacgttgcctgctaacttccgggtcacctcctctatgtcatcaccctctatgcag
ccaaagaaggttcaaatggacggtagtgtgtccggagcacagaggctggactctgccaca
gtcaggacttactcctgctag
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