Peromyscus maniculatus bairdii (prairie deer mouse): 102912993
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Entry
102912993 CDS
T11302
Symbol
Arpc1a
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04144
Endocytosis
pmav04517
IgSF CAM signaling
pmav04530
Tight junction
pmav04666
Fc gamma R-mediated phagocytosis
pmav04810
Regulation of actin cytoskeleton
pmav05100
Bacterial invasion of epithelial cells
pmav05132
Salmonella infection
pmav05135
Yersinia infection
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102912993 (Arpc1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102912993 (Arpc1a)
09144 Cellular community - eukaryotes
04530 Tight junction
102912993 (Arpc1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
102912993 (Arpc1a)
09150 Organismal Systems
09151 Immune system
04666 Fc gamma R-mediated phagocytosis
102912993 (Arpc1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102912993 (Arpc1a)
05135 Yersinia infection
102912993 (Arpc1a)
05100 Bacterial invasion of epithelial cells
102912993 (Arpc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmav04131
]
102912993 (Arpc1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmav04812
]
102912993 (Arpc1a)
Membrane trafficking [BR:
pmav04131
]
Others
Actin-binding proteins
Arp2/3 complex
102912993 (Arpc1a)
Cytoskeleton proteins [BR:
pmav04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
102912993 (Arpc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40
WD40_Prp19
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_WDR35_TULP_N
Beta-prop_WDR3_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
EIF3I
Rax2
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
102912993
NCBI-ProteinID:
XP_006982728
Ensembl:
ENSPEMG00000013996
UniProt:
A0A6I9LV53
LinkDB
All DBs
Position
23:complement(37105197..37129844)
Genome browser
AA seq
370 aa
AA seq
DB search
MSLHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYKKNGSQWMKAHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKDGIWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKP
ASTPWGSKMPFGQLMSEFGGSGTGGWVHGVSFSASGSRLAWVSHDSTVSVADASKSVQVS
TLKTEFLPLLSVSFVSENSVVAAGHDCCPMLFNYDDRGYLTFVSKLDVPKQSIQRNMSAM
ERFRNMDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTL
ESSIQGLRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgcatcagtttctgctagagccaatcacctgtcacgcctggaatagggatcgt
acccagatcgccctgagccccaataatcacgaagtacacatctacaagaagaatgggagc
cagtggatgaaagctcatgagctgaaggaacataatggacacatcacaggtattgactgg
gctcctaagagcgaccgcatcgtcacttgtggggcagaccgaaacgcctacgtctggagt
cagaaggatggcatctggaagcctaccctggtgatcctgaggattaaccgcgcagctact
tttgtgaagtggtccccactggagaacaagtttgctgtgggcagtggggcccggctcatc
tccgtttgttactttgagtctgaaaatgactggtgggtgagcaagcacattaagaagccg
attcgctccacagtcctcagcttggactggcatcccaacaatgttttgctggctgcaggc
tcgtgtgacttcaaatgcagagtattttctgcctacatcaaggaggtggatgagaagcca
gccagcacgccctggggcagcaagatgccttttggtcagctgatgtctgagtttggtggc
agtgggactggcggctgggtgcatggggtcagcttctctgccagtgggagccgcctggcc
tgggtcagccatgacagcactgtgtccgttgctgatgcctcgaaaagtgtgcaggtttca
actctgaagacggagttcctgccactgctgagtgtgtcgttcgtctcagagaacagcgtt
gtggccgccggccatgactgctgcccgatgctctttaactatgacgaccgtggctacttg
acctttgtgtccaagctagacgtcccaaaacagagcatccagcgcaacatgtccgctatg
gaacgcttccgcaacatggacaagagagccacaactgaggaccgcaacacagccttggag
acgctgcaccagaacagcatcactcaggtgtctatttatgaggtggacaagcaagactgt
cggaaattctgcactactggcatcgatggagccatgacaatttgggattttaagaccctg
gagtcttccatccagggcctccggataatgtga
DBGET
integrated database retrieval system
