Peromyscus maniculatus bairdii (prairie deer mouse): 102913026
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Entry
102913026 CDS
T11302
Symbol
Atg2b
Name
(RefSeq) autophagy-related protein 2 homolog B isoform X1
KO
K17906
autophagy-related protein 2
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04136
Autophagy - other
pmav04140
Autophagy - animal
pmav05010
Alzheimer disease
pmav05014
Amyotrophic lateral sclerosis
pmav05016
Huntington disease
pmav05017
Spinocerebellar ataxia
pmav05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102913026 (Atg2b)
04136 Autophagy - other
102913026 (Atg2b)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
102913026 (Atg2b)
05014 Amyotrophic lateral sclerosis
102913026 (Atg2b)
05016 Huntington disease
102913026 (Atg2b)
05017 Spinocerebellar ataxia
102913026 (Atg2b)
05022 Pathways of neurodegeneration - multiple diseases
102913026 (Atg2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmav04131
]
102913026 (Atg2b)
03029 Mitochondrial biogenesis [BR:
pmav03029
]
102913026 (Atg2b)
Membrane trafficking [BR:
pmav04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
102913026 (Atg2b)
Mitochondrial biogenesis [BR:
pmav03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102913026 (Atg2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
102913026
NCBI-ProteinID:
XP_042117067
Ensembl:
ENSPEMG00000015152
UniProt:
A0A6I9KVM6
LinkDB
All DBs
Position
14:complement(77320992..77388840)
Genome browser
AA seq
2075 aa
AA seq
DB search
MPWPFSESIKKRACRYLLQRYLGHFLQEKLSLEQLSLDLYQGTGSLAQVPLDKWCLNEIL
ESADAPLEVTEGFIQSISLSVPWGSLLQDNCALEVRGLEMVFRPRPRVATGSEPMYWSSF
MTSSMQLAKECLSQKLTDEQGEASQPFEGLEKFAETIETVLRRVKVTFIDTVLRIEHVPE
NSKTGAALEIRVERTVYCDETADESSGVNVHQPTAFAHKLLQLSGVSLFWDEFSASTKSS
PVCSTAPVETEPKLSPSWNPKIVYEPHPQLTRTLPEIAPSDPVQIGGLVGRLELSLTLKQ
NEVLPGAKLDVDGQIDSIHLFLSPRQVHLLLDMLAAIAGPENSSKIGLANKDRKNRPMQQ
EDEYRIQMELNRYYLRKDSLSMGVSSEKSFYETETARTPSSREEEVFFSMADMDMSHSLS
SLPPLGDPPHMDLELSLTSTYTNTPAGSPLSATVLQPTWGEFADHKEQPVRGPAFPSDLV
HPAPLQKAALPSRSVSVDESRPEFICRLAVGIFSVSVLHIDPLSPAETSPNVNPLTPMAV
AFFSCIEKMDPTRLSTEDFKAFRAVFADACSHDHLRFIGTGIKVSYEQRQRSASRHFSTD
MSIGQMEFLECLFPTDFHSVPPHYTELLTFHSKDGTDGHLPVCLQLHYKHSETRGPQGNQ
ARLSSVPQKAELQIKLNPVCCELDISIVDRLNSLLQPQKLTTVEMMASHMYASYNKHISL
HKAFTEVFLDDTHSPANRRVSVQVATPALHLSVRFPIPDLRSDQERGPWFKKSLQKETLH
LAFTDLESKTEFVGGSTPEQTKLELTFRELTGSFQEEKGEPSVKFFHVSGGVDGDTASSD
DFDWPRMVLKINPPAMHSILERIAAEEEEENDGHYQEEEEGGAHSLKDVCDLRRPAPSPF
SSRRVMFENEQMVMPGDPVEMTEFQDKAISNSHYVLELLLPNIHMTLPNKSFYEKLYNRI
FNDLLLWEPTAPSPVETLENISYGVGLSVASQLINTFSKDSFSPFKSAVHYDEDSGSEEE
TLQYFSAVDPNYRSRRKKKLDSQNKSSQSFLSVLLNVNHGLMAVFTDVKQENGEPMGNKH
GEFWLEFNSGSLFCVTKYEGFDDKHYICLHSSSLSLYHKGIVDGAILPTETRLPSSTRPH
WLEPTIYSSEEDGLSRAASDGVGGDNLNMLSVAVKILSDKSESNTKEFLVAVGLKGATLQ
HRMLPTGLSWHEQILNFLNIADEPVLGYNPPTSFTTFHVHLWSCALDYRPLHLPIRSLLT
VETFSISSSVALDKSSSTLRIIMDEAALHLSDKCNTVTINLNRDYVRVMDMGLLELTITA
VKSDSDGEQTEPRFELHCSSDVVHIRTCSDSCAALMNLIQYVASYGDLHAPNKAEVKPGV
PQRKPKVDSSGRSSSRGPVLPEADQQILRDLMSDAMEEIDMQQTSAPVGPQTNGVLDEKS
HTQEPCCSDLFLFPDESGNVSQEPSPAHASLPHHLISDTGTGAPTENDDFCILFAPKAAI
QEKEEEPVIKIMVDDAIVIRDDYFSLPITRMDSSKAPLHFPIPAIRYVVKEVSLVWHLYG
GKDFATVPPTSPAKSYISPHSSPSQTPTRHGRHTVCGGKGRNHDFLMEIQLSKVKFQHEV
YPPCKPECESSLLEHPVSRQVFIVQDLEIRDRLATSQMNKFLYLYCSKDMPRKAHSNMLT
IKALHVRPESGRLPQECCLRVSLMPLRLNIDQDALFFLKDFFTSLSTEVELLLTPDPEVT
KSPAADVTCSLPRHLSTSKEPNLVVPGPKQPSPNHSASSAEGANGLEEKDFSAEEASVRD
QPVFFREFRFTAEVPIRLDYHGKHVSMDQGTLAGILIGLAQLNCSELKLKRLFYRHGLLG
IDKLFSYAITEWLTDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGRIVR
GFQRGAASFGTSTAMAALELTNRMVQTIQAAAETAYDMVSPGTLSIEPKKAKRFPHHRLA
HQPVDLREGVAKAYSVVKEGIADTAQTIYETAAREHESRGVTGAVGEVLRQIPPAVVKPL
IVATEATSNVLGGMRNQIRPDVRQDESQKWRHGED
NT seq
6228 nt
NT seq
+upstream
nt +downstream
nt
atgccttggccattttcagagtctatcaagaagagggcctgtcggtacctcctgcagagg
tacctgggccacttcttgcaggagaagctgagcctggagcagctgagtctggacttgtac
cagggcaccgggtcgctcgcccaggtccccttggacaaatggtgtctcaatgaaatcctg
gagtcagcagacgcacctttagaagtcaccgaaggattcattcagtcaatttccctgtcg
gttccatggggctccttgctgcaggataattgtgcactggaagtgagagggctagagatg
gtcttccgtcctagacctcgtgtagcaactgggtctgagcctatgtattggtccagcttc
atgaccagcagtatgcagctggcaaaggagtgtcttagccagaagctgacagatgagcaa
ggagaagcatcccagccttttgaaggtctggaaaagtttgcggaaaccatcgaaacagta
ctaagaagagtgaaagtcacttttatagacactgtgttaagaattgaacatgtgccagaa
aattccaaaactggagctgcacttgaaatccgagtagagagaaccgtgtactgtgatgaa
actgctgacgagtcctcaggcgtcaatgtgcatcagcccacagcttttgctcacaaattg
ctgcagctctctggagtgtctctcttctgggatgaattttctgcttcaacaaaatcttcc
ccagtgtgttcaactgcaccagtggaaactgagccaaagctgtcacctagctggaacccc
aaaattgtttatgagccacacccacagctaactagaactttaccagagatagcaccctcg
gatccagtgcagattggagggctagtgggcaggctggagttgagtctcactctgaaacag
aatgaagtgcttccgggagccaagttggatgttgatggacagatagattccattcatcta
ttcctgtcgccaaggcaagtacacctgcttttggatatgttagcagctattgctggacca
gaaaattctagcaaaatagggttagctaataaagacaggaagaatcgacccatgcagcag
gaagacgagtatcgaattcagatggaattaaaccgatattatctgaggaaagattccctg
tctatgggtgtatcttcagagaagagcttctatgagacagaaacggctcgcacaccttct
agccgtgaagaagaagttttcttctccatggcagacatggacatgtctcacagtctgtcg
tctcttccaccccttggggaccctccacacatggacctggagttatccctgactagtaca
tatacaaacacacctgcaggatcaccgctaagtgctactgtgctgcagccaacttgggga
gagtttgcggaccataaagagcagcctgtgagagggccagcattcccatctgatttggtc
cacccggcgcctttacaaaaagcagctctcccctctaggtctgtgtcagtggatgaatcc
aggcctgagttcatctgtagactggctgtgggcatcttctcagtctccgtgctgcacatc
gatcctttgtctccagcggaaacctctccgaacgtcaatccattgacacccatggccgtt
gcgttcttctcttgtatagagaagatggacccaaccagactgtcgacagaagactttaag
gcttttcgagcagtctttgcagatgcttgttcacacgatcacctcagatttataggtacc
ggcatcaaagtgtcctatgagcagagacaaaggtcggcttcccggcattttagcactgac
atgtccattgggcagatggagtttttggagtgtctgtttccaacggattttcattctgtc
cctccccactacacagagcttctaacgttccattccaaagacgggactgatggccatctc
cccgtgtgtctgcagcttcactataagcactctgagactagaggaccccagggtaatcaa
gcaagactgagttcagttcctcagaaggcagaattacaaattaaattaaatccagtgtgt
tgtgaactggatatcagtattgtggataggttaaattccttgcttcaaccacagaaactc
actacagtagagatgatggcgtcgcacatgtatgcatcatataataaacatattagtttg
cacaaggctttcactgaagtgtttctagatgacacacacagccctgcaaatcgccgggtg
tctgtacaagtcgccaccccagcgctgcatctttctgttcgcttccccattcctgatctt
cggtcagaccaggaaagaggaccctggtttaagaagtctcttcagaaggagaccctccat
ttagcattcacagatctggagtctaagacggagtttgtgggaggatccaccccagaacaa
actaaactggaactgacttttagagagctaactgggtcattccaggaggagaagggagag
ccatctgtcaaatttttccatgtgtctggtggagtagatggagacacagcctcatcagat
gactttgactggccacgaatggtactgaaaataaatccaccagccatgcattccattttg
gagagaatagcagctgaagaggaggaagagaatgatggtcactaccaggaagaggaggaa
ggaggggctcattccctgaaagatgtctgtgacctgaggcgaccagccccatctcccttt
tcctctcgtagagttatgtttgagaatgagcagatggtgatgccgggagaccctgtagag
atgacagaatttcaggataaagccatcagcaattctcactatgtgctggaacttttgcta
ccaaatatccacatgacactgcccaataaaagcttttacgagaagctgtataacaggatc
tttaatgacctgcttctctgggagccaacagctccttccccagtggagacacttgagaat
atttcctacggtgttgggctttcggtagccagtcagctgatcaacaccttcagcaaagac
agcttcagcccctttaagtctgcagttcactatgatgaagacagtggatctgaagaagag
actttgcagtatttttctgctgttgatcccaactatcgttcccgtaggaaaaaaaagttg
gactctcagaacaagagctctcagagtttcctatcagtccttctgaatgtcaatcatgga
ttaatggcagtgttcacagatgtaaagcaagagaatggagagccgatgggaaataagcat
ggtgaattctggttagaattcaacagtggctcattattctgtgtgacaaaatacgaaggt
ttcgatgacaagcactacatctgcctgcattccagcagcctcagtctgtaccacaaaggc
atagtagatggagccattctccctacagagacacgcttgcccagttcaacgcgcccacat
tggttggaacctacaatttattcctctgaagaagacggcctcagccgagccgcctctgac
ggtgttgggggagacaatttgaatatgctctcggtggctgtgaagatactgtctgataaa
tcagagtccaatacaaaggagttccttgtggctgtggggctgaaaggagccactctgcag
cacaggatgctgcccaccggactcagctggcacgagcagattttaaacttcttgaatatt
gctgatgaacctgttttgggatataaccctccaacttcatttacaacttttcatgttcat
ctttggagctgtgcacttgattacaggccccttcacctgccaatccgatcccttcttact
gttgagacgttcagcatttctagcagtgttgccttggataaatcttcctccactctcaga
atcatcatggatgaggctgctttacacctgtctgacaagtgtaacactgtcactataaac
ctgaatagagattatgttcgtgtgatggacatgggacttttagagctgaccataactgca
gtgaagtcagattctgatggagaacagactgagccccgctttgagttgcactgttccagt
gatgtcgtccacatcagaacatgctcagactcatgcgccgcactgatgaatctcattcag
tatgtcgcaagttacggggacttacatgcacctaacaaagcagaagtgaagcccggagtc
ccacagagaaagccaaaggtagattccagtggtcgatcatcttcgcgtggtccggtgctt
cctgaagctgaccagcagattttacgggacctgatgagtgacgccatggaggagattgac
atgcagcagacctctgcccctgtcggaccacagactaatggtgtcctggatgaaaagtcg
cacactcaggagccatgctgttcagacctcttcttgttcccagacgagagtgggaatgtg
tcccaggagcctagccctgctcatgcctccctccctcaccacttgattagtgacacaggg
acaggagcacccactgaaaatgatgacttttgcattctttttgcaccaaaagcagccatc
caggagaaggaagaagagccagtgataaagatcatggttgacgatgcgattgtgataaga
gacgactatttcagtctgcccattacaaggatggatagcagcaaagccccgcttcacttt
cccatcccggccattcgctatgttgttaaggaagtctcgctggtgtggcatctttatgga
ggcaaggactttgcaacagtccctcctacttctccagctaagagttacattagtccccat
agctcaccttctcaaacacctacaaggcatggacgtcatacagtctgtgggggcaaagga
aggaaccatgactttttaatggaaatacaattaagcaaggtgaagtttcagcatgaagtc
taccccccgtgtaagcctgagtgtgagtccagcctcctagagcacccggtctccaggcag
gtgttcattgttcaggatcttgaaattcgggatcggctggcaacatcacaaatgaacaaa
tttttatacctgtactgcagcaaagacatgcctcgtaaagctcattccaacatgttgaca
attaaagcattacacgtccgtccggagtctggcaggttaccacaggagtgctgtttgaga
gtgtcactgatgccacttcgcctcaatatcgaccaggacgccctgttcttcctcaaggat
ttcttcacaagtctttctacagaagtggagcttctgttgactccagatccagaagttaca
aagtctcctgcagctgatgtcacctgcagtttgccaaggcatctgagtacctcaaaggag
ccaaatctagtagtccctgggcccaaacagccttccccaaaccatagtgccagttcagcg
gagggggctaatggcctggaggagaaggacttctcagccgaggaagcttcagttagagac
cagcctgtgttttttagagaattcagattcacagcagaagttcctattcggcttgactat
cacggcaaacatgtatcaatggatcagggaacactggctgggattttgattggcctggct
cagttgaactgttcagagctgaagctgaagaggctcttctataggcatggtttgctaggt
attgacaaattgttctcatatgcaatcaccgaatggcttactgacattaagaagaaccaa
ctaccaggaatcctgggaggtgttgggcctatgcattcactagttcaattagtgcaaggc
ctgaaggacttggtgtggctgccgatcgagcagtaccggaaggacggtcgcatcgtcaga
ggcttccagagaggtgctgcctccttcgggacctcgactgcaatggctgcgctagaactc
accaacagaatggttcaaaccatacaggcagcggcagagactgcttatgacatggtgtct
ccgggtaccctttccattgagcccaagaaggcaaagagatttcctcatcaccggttagcc
catcagccagtcgacctgagggaaggtgtggccaaggcctacagtgttgtaaaagaggga
attgcagacacggctcagaccatttatgagacggcagctcgagaacacgagagcagaggg
gtcactggtgctgtgggtgaagtcctgcgccagatcccaccggcagtggtcaagccctta
attgtagccaccgaagccacatcaaatgtgttaggtggcatgagaaaccaaatcagacca
gacgttcggcaggacgaatcgcagaagtggcgccatggggaggactga
DBGET
integrated database retrieval system
