Peromyscus maniculatus bairdii (prairie deer mouse): 102913122
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Entry
102913122 CDS
T11302
Symbol
Eif4a3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03013
Nucleocytoplasmic transport
pmav03015
mRNA surveillance pathway
pmav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102913122 (Eif4a3)
09122 Translation
03013 Nucleocytoplasmic transport
102913122 (Eif4a3)
03015 mRNA surveillance pathway
102913122 (Eif4a3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmav03019
]
102913122 (Eif4a3)
03041 Spliceosome [BR:
pmav03041
]
102913122 (Eif4a3)
03009 Ribosome biogenesis [BR:
pmav03009
]
102913122 (Eif4a3)
03012 Translation factors [BR:
pmav03012
]
102913122 (Eif4a3)
Enzymes [BR:
pmav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102913122 (Eif4a3)
Messenger RNA biogenesis [BR:
pmav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102913122 (Eif4a3)
mRNA cycle factors
Stress granule specific factors
102913122 (Eif4a3)
Spliceosome [BR:
pmav03041
]
Complex C
Other components
EJC/TREX
102913122 (Eif4a3)
Ribosome biogenesis [BR:
pmav03009
]
Eukaryotic type
90S particles
Helicases
102913122 (Eif4a3)
Translation factors [BR:
pmav03012
]
Eukaryotic type
Initiation factors
eIF-4
102913122 (Eif4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
TniB
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
102913122
NCBI-ProteinID:
XP_006990349
Ensembl:
ENSPEMG00000009441
UniProt:
A0A6I9M648
LinkDB
All DBs
Position
8:complement(107025300..107035542)
Genome browser
AA seq
411 aa
AA seq
DB search
MAATATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacggccacgatggcgacgtcgggctccgcgcggaagcggctgctcaaagag
gaggacatgaccaaagtggagttcgagaccagcgaggaggtggacgtgacgcccacgttc
gacaccatgggcctgcgggaggacctgctgcgcggcatctacgcctacggttttgaaaaa
ccttcagcaatccagcagagagctatcaagcagataattaaggggagagatgtcattgca
cagtctcagtctggcacaggcaagacagccaccttcagcatttcagtcctccagtgcttg
gatatccaggttcgagaaacccaggctttgatcttggctccaacaagagagttagctgta
cagattcagaagggtctgcttgctctgggggactacatgaatgtacagtgccacgcctgc
attgggggcaccaatgttggagaggacatccggaagctggactatgggcagcatgtggtg
gcaggcacaccaggacgtgtctttgatatgattcgccgtagaagtttaaggacacgggct
atcaagatgttggttttggatgaggctgatgaaatgttgaacaaaggtttcaaggagcag
atctacgatgtgtacaggtacctgccaccagccacacaggtggttctcatcagtgccacg
ttgcctcacgagatcctggagatgaccaacaagttcatgaccgaccccatccgcatcttg
gtgaagcgtgatgaattgactctggaaggcatcaagcagttctttgtggcggtggaaaga
gaggagtggaagtttgatactctgtgcgatctctacgacacgctgaccatcacccaggct
gtcatcttctgcaacaccaagaggaaggttgactggctgacagagaaaatgagagaagcg
aacttcactgtatcctccatgcacggagacatgcctcagaaagagcgcgagtccatcatg
aaggagttccggtcaggtgccagccgagtgctcatttccacggatgtctgggcccggggc
ctggatgtccctcaggtgtccctcatcattaactatgacctgcccaacaacagagaactg
tacattcacagaatcgggagatcgggtcgatatggccgcaaaggtgtggccatcaatttt
gtgaagaatgatgacatccgcatcctcagggacatagaacagtactactccacccagata
gacgagatgcccatgaacgtggctgacctgatctga
DBGET
integrated database retrieval system
