Peromyscus maniculatus bairdii (prairie deer mouse): 102913126
Help
Entry
102913126 CDS
T11302
Symbol
Trappc8
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X9
KO
K20305
trafficking protein particle complex subunit 8
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmav04131
]
102913126 (Trappc8)
Membrane trafficking [BR:
pmav04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
102913126 (Trappc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_3rd
Ig_TPPC8_C
Ig_TPPC8_2nd
SNAP
Motif
Other DBs
NCBI-GeneID:
102913126
NCBI-ProteinID:
XP_042120275
Ensembl:
ENSPEMG00000010916
LinkDB
All DBs
Position
19:complement(11106579..11187334)
Genome browser
AA seq
1461 aa
AA seq
DB search
MAQCVQSVQELIPDSFVPCVAALCSDEAERLTRLNHLSFAELLKPFSRLTSEVHMRDPNN
QLHIIKNLKIAVSNIVTQPPQPGAIGKLLNDVVSGSQPAEGSVANVITAGDYDLNISDRS
IKASVPWYSNWKDTFMELKESSLYTATTPWFESYRETFLQSMPASDHEFLNHYLACMLVA
SSGEAEPMEQFSKLSQEQHRIQHNSDYSYPKWFIPNTLKYYVLLHDVTSGDEQRAESIYE
EMKQKYGTQGCYLLKINSRAPNRASDEQIPDPWSQYLQKNSIQHQESYEDGPCTLTSNKN
SDSNLLSLDGLDNEVKVDGLPNNFRVHPLQLDQCGDPPNTDGSDHTKFASVHETKKASTG
VIRGACLTLTDHDRIRQFIQEFTFRGLLPHIEKTIRQLNDQLISRKGLSRSLFSATKKWF
SGSKVPEKSINELKNTSGLLYPPEAPELQIRKMADLCFLVQHYDLAYSCYHTAKKDFLND
QAMLYAAGALEMAAVSAFLQPGAPRPYPAHYMDTAIQTYRDICKNMVLAERCVLLSAEIL
KSQSKYSEAAALLIRLTSEDSDLRSALLLEQAAHCFINMKSPMVRKYAFHMILAGHRFSK
AGQKKHALRCYCQAMQVYKGKGWSLAEDHINFTIGRQSYTLRQLDNAVSAFRHILINESK
QSAAQQGAFLREYLYVYKNVNQLSPDGPLPQLPLPYINSSATRVFFGHDRRPADGEKQAA
THISLDQEYDSESSQQWRELEEHVVAVANKGVIPSSFYPTQYCLNSYSDNSRFPLAVVEE
PITVEVAFRNPLKVPLLLSDLSLLWRFQPKDANGKDIETVRERVTGEPEMIGTEVISEFL
INSEESKVARLKLFPHHIGELHILGVVYNLGTIQGSVTVDGIGALPGCHTGKHSLSMSVR
GRQDLEIQGPRLNNTKEEKTSVKYGPDRRLDPIITEEMPLLEVFFIHFPTGLLCGEIRKA
YVEFVNVSKCPLTGLKVVSKRPEFFTFGVNTAALTPLSPSTSENCSAYKTVVTGAASAGT
ALVSCASSGDFGTSTGQQLEAIPVPLPDAVLLPGASVQLPMWLRGPDEEGVHEINFLFYY
ESVKKQPKRRHRILRHTAVICTSRSLNVRATVCRSNSLEDEEGRGGNMLVFVDVENTNTS
EAGVKEFHMVQVSSSSKHWQLHKSVNISENKDAKLASREKGKFCFKAVRCKQKEAAIQSS
EKYTFADIIFGNEQIISSASPCADFFYRSLSSELKKPQDPLSAHPEKPVDDAVRLIQKCS
EVDLNIVVLWKAYVVEDNKQLILEGQHHVVVRTLGKEAFSQSQKQEPPEMELLKFFRPEN
TTVSTRPSVEQLSNLIKTSLHYPESFHHPFHQKSLCLVPVTLLLSNCSKADVDVIVDLRH
KTTSPEALETHGSFTWLGQTQYKLQLKSEETQSLQLKACFVHTGVYNLGTPRVFAKLSDQ
VTVFETSQQNSMPALIIINNA
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtgcgtgcagtcggtgcaggagctcatccccgactccttcgttccctgcgtc
gccgcgctgtgcagcgacgaagccgagcggctcacccgcctcaaccacctcagcttcgcc
gagctgctcaagcccttctcccgcctcacttccgaagttcacatgagagatcctaataat
caactgcatataattaaaaatttgaagatagcagtaagcaacattgtcacccagccacct
cagccgggagccattgggaagcttttgaatgatgtcgtttctggcagccagcctgcagaa
ggatcagtggctaatgtgattacagcgggggattatgaccttaacatcagtgatcggtca
attaaagctagtgttccttggtacagtaattggaaagacactttcatggaattgaaagaa
tcctcgttatatacagcgactactccgtggtttgagtcttacagagagacatttctgcag
tccatgccagcatcagatcatgagtttctgaaccactatttagcgtgtatgttggtggcg
tcgtccggtgaagctgaacctatggaacagttttcaaagttgtcacaagaacagcatcga
attcagcacaacagtgattattcctaccctaagtggtttatcccaaatacacttaaatat
tacgtgcttttgcatgatgtaacttcaggagatgagcagagagctgaatcaatttatgaa
gaaatgaaacagaaatatggaactcagggttgttatttgcttaaaattaattctcgagca
ccgaatcgagcatcagatgaacagataccagatccttggagtcaatatctccagaaaaat
agtattcaacaccaggaatcatatgaagatggcccttgtactttgacctccaataagaat
tctgatagtaacttgctctcattggatggactagataacgaagtcaaagtagatggttta
ccaaataacttccgagttcatccacttcaattagaccaatgtggtgaccctcctaatacc
gatggctcagatcatacaaagtttgcttcagtacacgaaacaaagaaagcaagtactgga
gtgattcgtggtgcttgtttgacactcactgatcatgatagaattcgacagtttatacaa
gagtttacattccgtggccttttaccacatatagagaaaacaattcggcaattaaatgat
cagctaatatcaaggaaaggtttgagtcgatctctgttttctgccactaagaaatggttt
agtggcagtaaagttccagaaaagagcattaacgagctgaaaaatacatctgggttgttg
tatccaccagaagcacctgagcttcaaatcaggaaaatggctgacttgtgctttttggtg
cagcattatgatttggcttacagttgctatcatactgcaaagaaggatttccttaatgat
caagcaatgctttatgcagctggagccttggagatggcagcagtgtcagcctttctccag
ccaggagctccgaggccataccctgcccattacatggacacagccattcagacctatagg
gacatctgcaagaatatggtgttggctgaaagatgtgtgttgcttagtgccgaaatttta
aaaagtcaaagcaaatactcagaggctgcagcccttctaatacggttgacaagtgaggat
tctgatctccgaagtgcacttctcttggagcaggctgctcattgcttcataaacatgaag
agccccatggttagaaaatatgcttttcacatgatcctggctggccatcggtttagtaaa
gcagggcagaaaaagcatgctttgcgctgctattgtcaagccatgcaagtttacaaaggg
aaaggctggtccctggcagaggatcacatcaacttcaccatcgggcgccagtcctacact
ctgcgccagctggacaatgctgtgtctgctttcaggcacattttaatcaatgaaagcaaa
caatcggctgctcagcaaggggcctttctcagagagtatctttatgtttataagaatgta
aatcagctgtcaccagatggccctttaccacagcttcccttaccatacattaacagttca
gcaacacgggttttctttggccatgacagacgaccagcagatggtgaaaagcaagcggct
actcatataagtcttgatcaagaatatgactctgagtcatctcagcagtggcgagaactt
gaggagcatgttgtggctgtggctaataaaggagtaattccatccagtttctaccccaca
cagtattgtttgaacagttactcagacaactccagatttccacttgcagttgtggaagag
ccaattacggtggaagtggcgttcagaaaccctttgaaagttccacttttgctgtcggac
ttgtcattgctctggaggtttcagcctaaagatgccaatgggaaagacatcgaaacagtt
agagaacgagttacaggtgaacctgaaatgattggaactgaagttatttcagaattctta
attaacagtgaagaatctaaagtggcaagactgaagctctttccccatcacataggggag
ctgcacattctgggagttgtgtataatcttggcactattcagggctccgtgacagtagat
ggcattggtgctcttcctggatgtcacacaggaaaacattctttgagtatgtcagtccga
gggagacaggacttagagattcagggccctcgacttaacaacacgaaggaggagaagaca
tctgtcaagtacggtcctgaccggcgtttagaccctatcatcaccgaggagatgccgttg
ctggaggtgttctttatacattttcctacagggctcctctgtggagaaatccggaaagca
tatgtcgaatttgtcaatgtcagcaagtgtcctctgactggattgaaggttgtgtctaaa
cgtccggagttcttcacttttggggtcaacactgctgctctaacaccactgagcccttcc
acatctgaaaactgcagtgcttacaagacggtagttacaggcgctgcctctgcaggcacg
gcacttgtgtcttgtgcgtcttctggagactttgggaccagcacaggacagcagctggag
gccatcccagtcccccttcctgatgccgtgctgctccccggggcttctgtccagctgcca
atgtggcttcgagggccagacgaagagggtgtccatgagattaactttttattttactat
gaaagtgttaaaaagcagcctaaaagacgacacagaatattaagacacactgcagttatt
tgtactagccggtctttgaacgtgcgagcaactgtctgcagaagtaattcacttgaagat
gaagaaggcaggggaggcaatatgctagtctttgtggatgtggaaaataccaatactagt
gaagcaggggttaaggagttccacatggtgcaggtgtcaagcagtagcaagcactggcag
ctgcacaaatccgtgaacatctctgaaaacaaagatgccaaacttgccagtagggagaaa
ggaaagttttgcttcaaggcagtaagatgtaaacaaaaagaagctgctatacagtcctcc
gaaaaatacacttttgcagatatcatctttggaaatgaacagataataagttcagcaagt
ccatgtgcagatttcttttaccgaagtttatcctcagagttgaagaaaccacaagacccg
ctttctgcacatccagagaaacctgtagacgatgctgtgcggctgattcagaagtgcagt
gaggtggacctgaacattgtcgtgttatggaaggcatacgttgtagaagataacaagcag
cttattttagaaggccagcatcatgttgttgttcgcactcttggaaaagaagccttttca
cagtctcagaaacaggagccaccagaaatggaactattgaagtttttcaggccagaaaac
actacagtttccacaagaccatcagtagaacagctttctaatctcattaaaacaagtctt
cactacccagaatcatttcatcatccatttcatcaaaaaagcctttgcctagtaccagtg
acccttttactttctaactgttctaaggctgacgtagatgtcatagttgatctccggcat
aaaacaacaagtccagaggcactggagactcatggatcattcacgtggcttggacagaca
cagtataaactgcagctgaaaagcgaagagacgcagagtttgcaactgaaagcatgcttt
gttcatacaggtgtttataaccttgggactccaagggtattcgccaagttatcggaccag
gttacagtatttgaaacaagtcagcagaactccatgcctgctctgattatcatcaataac
gcctga
DBGET
integrated database retrieval system
