Peromyscus maniculatus bairdii (prairie deer mouse): 102913308
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Entry
102913308 CDS
T11302
Symbol
Pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03030
DNA replication
pmav03410
Base excision repair
pmav03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102913308 (Pole)
03410 Base excision repair
102913308 (Pole)
03420 Nucleotide excision repair
102913308 (Pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmav03032
]
102913308 (Pole)
03400 DNA repair and recombination proteins [BR:
pmav03400
]
102913308 (Pole)
Enzymes [BR:
pmav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
102913308 (Pole)
DNA replication proteins [BR:
pmav03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
102913308 (Pole)
DNA repair and recombination proteins [BR:
pmav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
102913308 (Pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
102913308
NCBI-ProteinID:
XP_006984154
Ensembl:
ENSPEMG00000019269
LinkDB
All DBs
Position
23:332556..387441
Genome browser
AA seq
2279 aa
AA seq
DB search
MVLRNSGRRHAEPGADGEGSRDDGPSSSVSALKRLERSQWTDKMDFRFGFERLKEPGERT
GWLINMHPTEILDEDKRLVSAVDYYFIQDDGSRFKVALPYKPYFYIATRKGCEREVSSFL
SKKFQGKIATLENVPKEDLDLPNHLVGLKRSYIKLSFHTVEDLVKVRKEISPAVKKNREQ
DHTSDEYTAMLSSILQGGNVITDEEETSKKISDQLDNIVDMREYDVPYHIRLSIDLKIHV
AHWYNVRFRGNAFPVEITRRVDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEVHLIQRWFEHVQETKPTIMV
TYNGDFFDWPFVEARAAVHGLSMYQEIGFQKDSQGEYKASQCIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDAETYV
GGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEKTMRHAIEEEEKVPMEQVTNFQEVC
DQIKAKLTCLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAIVDEATCAACDFNKPG
ANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGPARAFHELSREEQAKYEK
RRLADYCRKAYKKIHMTKVEERLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS
AAVEVGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA
NIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKTTNVKKPKLTISYPGAMLNIM
VKEGFTNHQYQELMEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSK
AANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYII
SRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSA
IQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDVYKQKKISELFVLEGKRQIVMAQA
SENNLSVCTPDIEDFGLTKPYHSAVPVATKRKRVWESQEESQDIALTVPWQEVLGQPPSL
GTTQEEWLVWLQFHKKKWQLQAQQRLARRKKQRLESTEDVPRLGAIREGPATGLGSFLRR
TARSILDLPWQIVQISETNQAGLFRLWAIIGSDLHCIKLSISRVFYVNQRVAKAEEGPSY
RKVNRALPRSNMVYNLYEYSVPEDMYQEHINEINTELSAPDIEGVYETQVPLLFRALVQL
GCVCVVNKQLVRHLSGWEAETFALEHLEMRSLAQFSYLEPGSIRHIYLYHHSQGHKALFG
VFIPSQRRASVFVLDTVRSNQMPSLSALYSAEHSLLLEKVDPKLLPPPKHTFEVRAETNL
KTICRAIQRFLLAYKEERRGPTLIAVQSNWELCRLASEIPVLEEFPLVPVRVADKISYGV
LDWQRHGARRMIWHYLNLDTCLSQAFEMSRYFHIPVGNLPEDISTFGSDLFFARHLQRHN
HLLWLSPTSRPDLGGKEADDNRLVMEFDDRATVEINSPGCYSTVCVELDIQNLAVNTILQ
SHHINDMEGAGSMGISFDVIQQASLEDMVTGNQAANAPASYDETALCSSTFRILKSMVVG
WVKEITQYHNIYADNQVMHFYRWLQSPCSLLHDPALHRTLHNMMKKLFLQLIAEFKRLGS
SVIYANFNRIILCTKKRRIEDALAYVEYITNSIHSKEIFHSLTISFSRCWEFLLWMDPSN
YGGIKGKVPSSIHCGQQDSQEKEETKDEEDEEEDEEEEGMEESEVEDLLENNWNILQFLP
QAASCQSYFLMIVSAYIVAVYHSMKNELRHTVPGSTPVKRKGASQFSQEANGAAGALPGM
VTFSQNYVANELTQSFFTITQKIQKKVTGSRNSTEPSEMFPVLPGSHLLLNNPALEFIKY
VCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCHSYVLPEVICHSCNFCRDL
DLCKDSSFSQDGAILPQWLCSNCQAPYDSAAIESALVEVLQRKLMAFTLQDLVCLKCRGM
KETHMPVYCSCAGDFVLTIHIEVFMEQIRIFQNIAKHYSMSYLQETIEWLLQTSPLSNC
NT seq
6840 nt
NT seq
+upstream
nt +downstream
nt
atggtcctcaggaactctggacgtaggcacgccgaaccgggcgcggacggcgaaggcagc
cgggatgatggtccctcttcctcagtctcagcactcaagcgtctggaacgcagccagtgg
acagataagatggactttaggtttggttttgagaggctgaaagagcctggagaaaggacc
ggctggctcatcaacatgcaccctactgagattttagatgaagacaaacgcttagtcagt
gcagtggattactacttcattcaagatgatggaagcagatttaaggtggccttgccctat
aagccgtatttctacattgcaaccagaaagggttgtgagcgtgaagtttcatcttttcta
tccaagaagtttcagggtaaaattgcaacactagagaatgttcccaaagaagatctggac
ttgccaaatcacttggtcggcttgaagcggagttacatcaaactgtccttccacactgta
gaggaccttgtcaaagtgaggaaggagatctcccctgctgtgaaaaagaaccgggagcag
gaccataccagtgatgagtacacagcaatgctttccagtattctgcaaggaggcaatgta
attactgatgaagaggaaacctctaagaagatatctgaccagttggacaacatagtggac
atgcgggagtatgatgttccctaccacattcgcctctccattgatctcaaaatccatgtg
gctcattggtacaatgtcagatttcgaggaaatgcttttcctgtggaaatcacccgacga
gttgatcttgttgaacgacctgaccctgtggttttggcatttgacattgagacaaccaaa
ctgcctctcaaatttcctgatgctgaaacagaccagattatgatgatttcctatatgatt
gatggccagggctacctcatcactaacagggagattgtttcagaagatattgaagatttt
gagttcactcccaaaccagaatatgaagggcccttttgtgtcttcaatgaacccgatgag
gtccatttgatccagagatggtttgagcatgtccaggagaccaaacctactattatggtc
acctacaatggggatttttttgactggccatttgtggaggctagggcagcagtccatggc
ctgagcatgtaccaggagataggtttccagaaggacagccagggggaatataaagcatcc
cagtgcatccacatggactgcctcaggtgggtgaagagggacagctaccttcctgtgggc
agtcataatctcaaggcagctgccaaggccaaacttggctatgaccctgtagagctggac
cccgaggacatgtgtcgtatggccactgagcagcctcagactctggccacttactcagtg
tcagatgctgttgccacttactacctgtacatgaagtatgtccatcccttcatattcgcc
ctgtgcaccattattcccatggaacctgatgaggtgctgcggaaaggctctggaacactg
tgtgaagccttgttgatggtgcaagctttccacgccaacattatcttccccaataagcaa
gagcaggagttcaacaagctgacagatgatggccatgtgctggatgctgagacctacgtg
gggggccatgtggaagcactagagtctggtgtcttccgaagtgatatcccgtgccggttt
aagatgaatcctgcagcctttgatttcctgctacagcgagttgagaaaactatgcgccat
gccattgaagaagaagagaaggtgcctatggaacaagtcaccaactttcaagaggtgtgt
gatcagattaaggccaagctcacctgcctaaaagatgttcctaacagaatagaatgccct
cttatctaccatctagatgttggggccatgtatcctaacataatccttacaaaccgcctg
cagccttctgccatagtggatgaggccacctgtgctgcctgtgacttcaataagcctgga
gcaaattgtcagaggaagatggcctggcagtggaggggagaattcatgccagcaagtcgc
agtgaataccatcgaatccaacatcagctggagtcagagaagtttcctcctttgttccca
gaggggccagcccgggcctttcatgagctgtcccgtgaggaacaggctaaatatgagaag
cggaggctggcagattattgccggaaagcctataagaagatccatatgaccaaggtagaa
gaacgtctgacaaccatctgccagcgggaaaactcattttatgtggacacagttcgcgcc
tttcgagacaggcgctacgagttcaaagggctgcacaaggtatggaagaagaagctctca
gcagctgtagaggtgggtgatgcatcggaggtgaagcgctgcaagaacatggagatcctt
tatgactcactgcagctggctcacaagtgcatcctcaactccttctatggctatgtcatg
cgcaaaggggctcgctggtactccatggagatggctggtatcgtctgcttcacaggagcc
aacatcatcacccaggcaagagagctgattgagcagatcgggaggcccttagaactggac
acagatggaatatggtgtgtcctacccaatagttttcctgaaaattttgtcatcaagaca
accaatgtgaagaaacccaaactgaccatctcctatcctggtgccatgttgaacatcatg
gtcaaggaaggcttcaccaaccaccagtatcaggaactgatggagccttcctcgctcacc
tatgtcacccgctctgagaacagcatcttttttgaagttgatggaccataccttgctatg
atactcccagcctctaaggaagaaggcaagaaactgaagaagagatacgctgtatttaat
gaagatggttccttggctgaactgaaaggttttgaggtgaaacgccgaggggagttacag
ctgattaaaatattccagtcctcagtgtttgaggccttcctcaagggcagcacactggag
gaagtgtatggctctgtggccaaggtggctgactactggctcgatgtgctctatagcaag
gctgctaacatgcctgattctgaattgtttgagctgatttctgagaaccgttccatgtct
cggaagctagaagattatggggagcagaagtctacatccatcagcacagcaaagcgcctg
gctgaatttttgggagaccaaatggtcaaggatgctggactaagctgtcgctatatcatc
tccagaaagccagagggatctcctgtcactgagagggccattccacttgccattttccaa
gcagagcctacagtgaggaaacattttctgaggaaatggctaaagagttcatcacttcaa
gactttgatattcgcacaattctggactgggactactacatagagcggctaggaagtgcc
atccagaaaatcatcactatccctgcagctctgcagcaggtgaagaacccagttccacgt
gtcaaacacccagactggctgcataaaaaattgctagaaaagaatgatgtctacaagcag
aagaagatcagtgaactctttgtccttgaaggaaagagacagattgtgatggcacaggct
tcagaaaacaatctgagtgtctgcactccagacatcgaggactttggactcacaaagcca
taccactctgcagtcccagttgctactaagaggaagcgagtctgggagagccaagaggag
tctcaggatattgcactaactgtgccctggcaagaggtcttggggcagcctccctccctc
ggaactacccaagaagagtggttggtctggctccagttccacaagaaaaagtggcagcta
caggcccaacagcgcctggcccgcaggaagaagcaacgtctagagtcaacagaggatgtg
ccaaggcttggggctatccgagagggacctgccacggggctgggaagctttttgcgacgg
actgcccgaagtattctggaccttccatggcagattgtacagatcagtgagaccaaccag
gctggtctcttcaggctatgggccatcatcggcagtgacttgcactgcatcaagctgagc
atctctcgagtattctatgtgaaccagcgggtagccaaagcagaggaaggaccttcatat
cgaaaggtgaatcgggctcttcctcgttccaacatggtctacaatctctatgagtattca
gtaccagaggacatgtaccaagaacacatcaacgagatcaacactgagttgtcagcacca
gacattgagggcgtgtatgagactcaggtcccgttgttattccgggcccttgtacagctg
ggctgtgtgtgtgtagtcaacaaacagctggtaaggcacctttcaggatgggaagctgaa
acctttgccctcgagcacctagaaatgcgttcactggctcagttcagctacttggaacca
gggagtatccgccacatctacctgtaccaccactcacagggccacaaggcactctttggt
gtctttatcccctctcagcgaagagcatctgtgtttgtattggatactgtgcgcagcaac
caaatgcccagcctcagtgccctgtactcagcagaacatagcctgctactggagaaggtg
gaccccaagctcctccctccccccaaacacacctttgaagttcgtgctgaaaccaacctg
aagacgatctgcagagctatccaacgcttcctgcttgcctataaggaagaacgccggggg
cccacactcatcgctgtccagtctaactgggagctgtgtagactggccagtgagattcct
gtcttagaggagttcccactggtgcctgtccgagtggctgacaagatcagctatggagtt
ctggactggcagcgccatggagcccgccgaatgatctggcactacctcaatttagacact
tgcctttcacaggcttttgagatgagcaggtatttccacatccccgttgggaacctacca
gaagacatttccacctttggctccgaccttttttttgcacgccacctccagcgccacaac
cacctgctttggctgtctcctacctctcggcctgacctgggtgggaaggaagctgatgac
aatcgccttgtcatggagtttgatgatcgagccactgtggaaatcaatagtcctggctgt
tattccactgtgtgcgtggagttggacattcaaaatctggcagtcaacaccatcctccag
tcccaccatatcaatgacatggagggggctggcagcatgggcatcagcttcgatgtgatt
cagcaggcctccctagaggacatggtcacaggcaatcaagctgccaatgccccagccagc
tatgatgagacagccctctgctctagcaccttcaggatcctgaagagcatggtagttggc
tgggtaaaggagatcacacagtaccacaatatctatgctgacaatcaggttatgcacttc
taccgctggctccagtcaccatgttctctgctccatgacccagccttgcaccggacacta
cacaatatgatgaagaagctcttcttgcagctcattgctgagttcaagcggctggggtca
tcagtcatctatgccaacttcaatcgcatcatcctttgtacaaagaagcgccggatagag
gatgcccttgcctatgtggaatatatcaccaacagcatccattctaaagagatcttccat
tccctgacaatctctttctctcgatgctgggaatttcttctctggatggatccatccaac
tatggtggaatcaaaggaaaagttccatctagtattcactgtggacagcaagactcccag
gaaaaggaggaaaccaaggatgaggaagatgaggaagaggatgaggaggaagagggtatg
gaggaatctgaggttgaggacctactggagaacaactggaacattctgcagtttttgcca
caggcagcctcttgccagagctacttcctcatgattgtttcagcatacatcgtggctgtg
taccatagcatgaagaatgaattgagacacactgtcccaggcagtacccctgtgaagagg
aagggggctagccagttctcccaagaggctaacggggcagctggagcccttcctggaatg
gtcaccttctctcaaaattatgtggcaaatgagctcactcagagcttcttcaccatcact
cagaaaattcagaagaaagtcacaggctctcggaactccactgagccctcagagatgttc
cctgtcctccctggttcacacttgctgctcaataatcctgctctggagttcatcaaatat
gtgtgcaaggtattgtccctggatacaaacatcacaaatcaggtgaataagctgaaccga
gacctacttcgcctggtagacgttggtgaattctctgaagaggcccagttcagagacccc
tgccactcctacgtgctccctgaggtgatttgccacagctgtaatttctgccgagacctg
gacctgtgcaaagattcctccttctctcaggatggggccatcctccctcagtggctctgc
tccaattgtcaggccccctacgactcagctgccattgagtcagccttggtggaagtcctg
cagaggaaactgatggccttcacactacaggacctggtatgcctgaagtgccgtggtatg
aaagagacccatatgcctgtgtactgcagttgtgccggggactttgttctcaccatccac
attgaggtcttcatggaacagattagaatcttccagaatattgccaagcactacagtatg
tcatacctccaggagaccatagaatggctgctacaaacaagccctttatcaaactgttag
DBGET
integrated database retrieval system
