Peromyscus maniculatus bairdii (prairie deer mouse): 102913669
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Entry
102913669 CDS
T11302
Symbol
Sox3
Name
(RefSeq) transcription factor SOX-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmav03000
]
102913669 (Sox3)
Transcription factors [BR:
pmav03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102913669 (Sox3)
SSDB
Ortholog
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
102913669
NCBI-ProteinID:
XP_042125371
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All DBs
Position
X:15401618..15403739
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AA seq
442 aa
AA seq
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MRPARENASGERSPRVPADFARSTSASLPFPLEPPVPRPPSATPTESPGLFTVAAPAPGA
PSPPATLAHLLPAPAMYSLLETELKNPVGPPTPAAGTGGPAAPGGAGKSSANPAGGANAG
SGGANGGGGGSDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDA
EKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDKYSLPGGLLPPGAAAAAAAAAA
AAAASSPVGVGQRLDTYTHVNGWANGAYSLVQEQLGYAQPPSMSSPPPPPALPQMHRYDM
AGLQYSPMMPPGAQSYMNAAAAAAAASGYGGMAPSAAAAAAAAYGQQPATAAAAAAAAAA
MSLGPMGSVVKSEPSSPPPAIASHSQRACLGDLRDMISMYLPPGGDAADAASPLPGGRLH
GVHQHYQGAGTAVNGTVPLTHI
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccagctcgagagaacgcatcaggtgagagaagcccgcgcgttcccgccgacttc
gcgcggagcacttccgcaagcctgcccttcccgctcgagccgccggtcccccggccccca
agcgccactccgacggagtcccctggccttttcaccgtggccgctccagcccctggagcg
ccttctcctcccgccacgctggcgcaccttcttcccgccccggcaatgtacagcctgctg
gagactgaactcaagaaccccgtagggccgcccaccccggccgcgggcaccggcggcccc
gcagccccaggcggtgcaggcaagagtagcgcgaacccagccggcggcgcgaacgcaggc
agcggtggcgcgaacggcggtggcggtggcagcgaccaggaccgcgtaaagcggcccatg
aacgctttcatggtatggtcccgcgggcagcggcgcaagatggccctggagaaccccaag
atgcacaactccgaaatcagcaagcgcttgggcgccgactggaaactgctgaccgatgct
gagaaacgaccgttcatcgacgaggccaagcgactgcgtgccgtgcacatgaaggagtac
ccggactacaagtaccggccgcgccgcaagaccaagacgctgcttaagaaggacaagtac
tccctgcccggcggcctcctgcccccgggcgccgccgccgccgcggccgccgccgccgct
gccgctgccgccagcagcccagtgggcgtgggccagcgcctggacacgtacacgcacgtg
aacggctgggccaacggcgcgtactcgctggttcaggagcagctgggctacgcgcagccc
ccgagcatgagcagcccgccgccgccgccggcgctgccccagatgcaccgctacgacatg
gctggcctgcagtacagccccatgatgccacccggcgcccagagctacatgaacgccgcc
gccgctgccgccgccgcctcgggctatgggggcatggcgccctcggccgcggccgctgca
gccgccgcctacgggcaacagccagccaccgccgccgctgcggccgctgccgccgccgcc
atgagcctgggccccatgggctccgtggtgaagtcggagcccagctctccgccgcccgcc
atcgcttcgcactcgcagcgcgcgtgccttggcgacctgcgcgacatgatcagcatgtac
ctgccacctggcggggatgcggctgacgccgcctctccgctcccgggcggccgcctgcac
ggcgtgcaccagcactaccagggcgccgggactgcagtcaatggaacggtgccgctgacc
cacatctga
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