KEGG T11302: 102913686

Peromyscus maniculatus bairdii (prairie deer mouse): 102913686

Entry

102913686         CDS       T11302

Symbol

Elob

Name

(RefSeq) elongin-B

K03873

elongin-B

Organism

pmav Peromyscus maniculatus bairdii (prairie deer mouse)

Pathway

pmav04066

HIF-1 signaling pathway

pmav04120

Ubiquitin mediated proteolysis

pmav05170

Human immunodeficiency virus 1 infection

pmav05200

Pathways in cancer

pmav05211

Renal cell carcinoma

Brite

KEGG Orthology (KO) [BR:pmav00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    102913686 (Elob)
09130 Environmental Information Processing
  09132 Signal transduction
   04066 HIF-1 signaling pathway
    102913686 (Elob)
09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    102913686 (Elob)
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    102913686 (Elob)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    102913686 (Elob)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pmav04121]
    102913686 (Elob)
   03400 DNA repair and recombination proteins [BR:pmav03400]
    102913686 (Elob)
Ubiquitin system [BR:pmav04121]
Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     102913686 (Elob)
   Cul5 complex
     102913686 (Elob)
DNA repair and recombination proteins [BR:pmav03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     102913686 (Elob)

SSDB

Motif

Pfam:

ubiquitin Rad60-SLD

Other DBs

NCBI-GeneID:

102913686

NCBI-ProteinID:

XP_076433631

Ensembl:

ENSPEMG00000010435

LinkDB

Position

8:complement(12194832..12201103)

AA seq 118 aa
MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGEC
GFTSQTARPQAPATVGLAFRADDAFEALRIEPFSSPPELPDVMKPQDSGGSANEQAVQ

NT seq 357 nt +upstreamnt +downstreamnt
atggacgtgtttctcatgatccggcgccacaagaccaccatcttcacggacgccaaggag
tcgagtaccgtgttcgaattaaagcgcatagtcgaaggcatcctcaagcggccgccggac
gagcagcggctgtacaaggatgaccagctccttgatgacggaaaaactctgggcgagtgt
ggcttcactagccagacagcacggccacaggccccagccaccgtgggcctggccttccga
gcagatgatgcctttgaagccctgcgcatagagcccttctccagccctccagagcttccg
gatgtgatgaagccacaggattctggaggcagtgccaatgaacaagctgtgcagtga

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