Peromyscus maniculatus bairdii (prairie deer mouse): 102913857
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Entry
102913857 CDS
T11302
Symbol
Vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmav04131
]
102913857 (Vps50)
Membrane trafficking [BR:
pmav04131
]
Protein recycling
Others
EARP complex
102913857 (Vps50)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
102913857
NCBI-ProteinID:
XP_006991265
Ensembl:
ENSPEMG00000002198
UniProt:
A0A6I9M7T4
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All DBs
Position
3:complement(22686686..22793933)
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AA seq
965 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESLSDLGAFESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSADPFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKYFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDSEEETTSASE
GSHVLSAEETNFDRGYVKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIV
SRLMQVGEEFCGSKSEVLQESIRKQSINYFKNHHRIRLDELRMFLENETWELCPVKSNFS
ILQLHEFKFLEQSRSPSVSPSKQPLATSSKPVTLFEQYCSGGNPFEIQANHKDEETEDVL
ASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDVPVKSVSRETLKSRKKSDYSL
NKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDS
LESTGLGLSSSRLRTTLNRIQESLIDLEVSADPTATLTAAEERKEKVPSPHLNQLVILTS
GDTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTASELRKP
IYWIVAGKAIDYEQMLLLMTNVKWDVKEIMSQHNIYVDALLKEFEQFNKRLNEVSKRVRI
PLPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPD
KEFVETYIKAYYLTENDMERWIREHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDV
DRPKR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcaaatctctaatgacccggcagggtctgaaaagccctccggagagcctc
agtgatcttggtgcctttgagagtcttcgggtccctggaaaggaggaattcagggagctt
cgagaacagccgagcgaccctcaagctgaacaagagctaattaatagtatcgagcaagtc
tatttttctgcggacccgtttgatattgttaaatatgagctggagaagcttccacctgtt
ctcaatctgcaagaattggaggaatacagagacaaattaaagcaacaacaagctgcagtc
tctaaaaaagtagcagatttgattcttgaaaaacagcctgcttatgtaaaggagcttgaa
agagtgacttcgttgcagacaggtcttcagctggctgctgttatctgcacaaatgggagg
agacacttgaatattgcgaaggaaggttttactcaggccagcttgggccttcttgcaaat
caaaggaagcgtcagttgctgattggacttctgaagtcgttgagaaccataaaaacgttg
caaagaacggatgtacgcctaagtgaaatgctagaggaggaggactacccaggagcgatt
cagctgtgcctggagtgtcagaaggctgccagtactttcaaacactatagctgcataagt
gagctgaattcaaagctgcaggatactttggaacaaattgaggaacaattggatgtagct
ctttccaaaatctgcaagtattttgacattaatcattataccaaggttcagcaagcttat
cgacttcttggaaaaacacagactgcaatggatcaacttcatatgcacttcactcaagcc
attcacaacactgtgtttcaagttgtgcttggctatgtggagctgtgtgcaggaaacaca
gatacaaagttccagaagctgcaatataaagatctctgtacgcatgtaacaccagacagc
tatattccatgcctggcggacctgtgcaaagcactgtgggaagtgatgctcagctattac
aggacaatggagtggcacgagaagcatgacagtgaggaggagacaacttcagcctctgaa
ggaagtcatgtgttgagtgctgaagagaccaactttgatcgtggctatgtaaaaaagaag
ctggagcatggcctcacgcgaatatggcaggatgttcaactaaaagtaaaaacctacttg
cttggaactgatttatctatattcaaatatgatgattttatctttgttttggatatagtc
agcaggttgatgcaagttggagaagaattttgtggtagcaagtctgaagttttgcaggag
tccattagaaaacaaagtatcaattatttcaagaaccaccacagaatacgacttgatgaa
ctgagaatgtttctagagaatgagacgtgggagctttgccctgttaagtcaaatttcagc
atcttgcagcttcatgaatttaaattcctggaacagtctcgctccccatcagtttcacct
agtaagcaaccattggcaacttcttcaaaacctgtgactttgtttgagcagtattgtagt
ggtgggaatccatttgaaattcaagccaaccacaaagatgaagaaacagaagatgtcttg
gcttctaatgggtatgagtctgatgagcaggagaagagcgcctatcaggagtatgacagc
gacagtgatgttcctgaagagctgaagcgggattatgtggatgagcagacaggcgatgtg
cccgtgaagagtgtttcacgagagacccttaagagcaggaagaaatcagattacagtcta
aataaagtgaacgcgcccatcttaacaaacacaacattgaatgtaataagacttgttggg
aagtacatgcagatgatgaacattcttaagccaatcgcctttgatgttatccattttatg
tcccagctgtttgattattacttgtatgcaatatataccttttttggtcggaatgattca
ttggaatccacaggacttggcctcagtagtagcagactaagaacaacactcaacagaata
caagaaagccttattgacctggaggtttcagctgatcctactgccacgctcacagcagca
gaagaaagaaaggagaaggtacccagcccacacctcaatcaactagtgattttgacatct
ggggatacattatatgggttggcagagagagtggtagccacagaatccttggtgtttctg
gctgaacagtttgagttccttcagccacatctggatgctgtgatgcctgcagccaaaaag
ccctttctgcagcagttttactctcagacagtctcaactgccagtgaactccgcaaaccc
atttactggattgtggctggtaaagctattgattatgaacagatgctgctcctgatgact
aacgtgaaatgggatgtcaaagagatcatgtcccagcacaacatatatgtagatgcattg
ctgaaggaatttgagcagtttaacaagcggttaaatgaagtttctaagagagttcggata
cccttgcctgtgtcaaatatactttgggaacattgtatacgattagctaacagaactatt
gtggaaggatacgccaatgtcaagaagtgcagtaatgagggtcgtgccttgatgcaattg
gattttcaacagtttttaatgaagcttgaaaaactaactgatattagacccattcctgat
aaagaatttgtggaaacatatatcaaagcctactacctaactgagaatgacatggagcgc
tggatcagagaacacagggaatattcaacgaagcagctgaccaacctggtgaatgtttgc
ctgggatctcatatcaataagaaagcaagacaaaagctcctagcagccatagatgatgtg
gacagacctaaaagataa
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